| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4340085 = | 31 (0.520) | 7 (0.160) | 7/172 | NT | 29.7% | intergenic (+26/‑305) | ribAB‑II/PP_3814 | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein |
| ? | NC_002947 | 4340169 = | 11 (0.260) | intergenic (+110/‑221) | ribAB‑II/PP_3814 | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein | |||||
CTGCAGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGA > NC_002947/4339937‑4340190 | cTGCAGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAATACACAAGCAATTGATTTAGCggg < 1:1096982/150‑1 (MQ=255) taaaacaaagtgttctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaggg < 1:17971‑M1/3‑1 (MQ=255) gCAGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGc > 1:728574/1‑150 (MQ=255) aaaacaaagtgttctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGc > 2:17971‑M1/147‑150 (MQ=255) aaacaaagtgttctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGcc < 1:1617117‑M1/5‑1 (MQ=255) aGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGccc > 2:1450699/1‑150 (MQ=255) acaaagtgttctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCt < 1:1326888‑M1/7‑1 (MQ=255) ccTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTa > 2:635134/1‑150 (MQ=255) gtgttctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAgg < 2:1498188‑M1/12‑1 (MQ=255) tgttctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGa > 1:913912‑M1/138‑150 (MQ=255) ttctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgacctctcaaaagcaccaaGGGCCCTGTAGGAGc > 1:1278386‑M1/136‑150 (MQ=255) tctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCg > 2:1326888‑M1/135‑150 (MQ=255) gTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCgg < 1:1450699/150‑1 (MQ=255) gTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCgg < 2:624205/150‑1 (MQ=255) ggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGt > 1:427879‑M1/132‑150 (MQ=255) gCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGACGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGttt > 2:961836/1‑150 (MQ=255) aaGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAc < 1:961836/150‑1 (MQ=255) tttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCcgc > 2:1617117‑M1/124‑150 (MQ=255) ttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGaa > 2:704309‑M1/121‑150 (MQ=255) tCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAAt < 2:1500940/150‑1 (MQ=255) ccTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCAGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCg > 1:145378/1‑150 (MQ=255) cTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGa < 1:635134/150‑1 (MQ=255) taggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATg < 2:1372661‑M1/32‑1 (MQ=255) taggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATg > 1:1372661‑M1/114‑145 (MQ=255) aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc < 2:1288391/150‑1 (MQ=255) actcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAAt > 2:674916‑M1/97‑127 (MQ=255) actcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAAt < 1:674916‑M1/31‑1 (MQ=255) gcgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt > 1:658853/1‑150 (MQ=255) ggggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGATGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAcc < 1:1254903/116‑1 (MQ=255) ggggCTGGCGGGCTATGAGCTGGAGGGGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAcc > 2:1254903/1‑116 (MQ=255) aaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt > 1:345600‑M1/93‑148 (MQ=255) aaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt < 2:345600‑M1/56‑1 (MQ=255) aggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc > 1:458899‑M1/92‑150 (MQ=255) ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg < 2:658853/150‑1 (MQ=255) tacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGcc > 1:1485617‑M1/87‑91 (MQ=255) tacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGcc < 2:1485617‑M1/5‑1 (MQ=255) cgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAg < 2:493050‑M1/11‑1 (MQ=255) cgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAg > 1:493050‑M1/85‑95 (MQ=255) ggCTATGAGCTGGAGGGGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATGGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAAcc < 2:728574/150‑1 (MQ=255) tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc < 1:1234958/138‑1 (MQ=255) tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc > 2:1234958/1‑138 (MQ=255) tcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGc > 2:1250376‑M1/78‑110 (MQ=255) tcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGc < 1:1250376‑M1/33‑1 (MQ=255) caagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATTCGAGGGTGACACCACCGACGCAtt > 2:929121‑M1/62‑117 (MQ=255) caagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATTCGAGGGTGACACCACCGACGCAtt < 1:929121‑M1/56‑1 (MQ=255) caagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGa > 1:1468061‑M1/62‑96 (MQ=255) caagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGa < 2:1468061‑M1/35‑1 (MQ=255) aagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAg > 1:40016‑M1/61‑71 (MQ=255) aagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAg < 2:40016‑M1/11‑1 (MQ=255) aTCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg < 2:1116476/92‑1 (MQ=255) aTCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg > 1:1116476/1‑92 (MQ=255) cccGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGc > 2:800581/1‑68 (MQ=255) cccGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGc < 1:800581/68‑1 (MQ=255) gcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt > 2:1072358‑M1/52‑107 (MQ=255) gcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt < 1:1072358‑M1/56‑1 (MQ=255) ccGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAccc < 1:531247/68‑1 (MQ=255) ccGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAccc > 2:531247/1‑68 (MQ=255) ggatggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg < 1:882075/72‑1 (MQ=255) ggatggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAgg > 2:882075/1‑72 (MQ=255) tggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGc < 1:1278971/103‑1 (MQ=255) tggCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGc > 2:1278971/1‑103 (MQ=255) acaAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAg < 1:1093899/55‑1 (MQ=255) acaAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAg > 2:1093899/1‑55 (MQ=255) aaGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCCTTTGACAGGGCGGa < 2:23409/123‑1 (MQ=255) aaGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCCTTTGACAGGGCGGa > 1:23409/1‑123 (MQ=255) ccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGACACCACCGAc < 1:1267636‑M1/51‑1 (MQ=255) ccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGACACCACCGAc > 2:1267636‑M1/5‑55 (MQ=255) | CTGCAGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGA > NC_002947/4339937‑4340190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |