New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4540086 =	58 (0.970)	6 (0.100)	6/230	NT	10.0%	coding (243/831 nt)	nudC	NADH pyrophosphatase
	?	NC_002947	4540109 =	52 (0.910)					coding (220/831 nt)	nudC	NADH pyrophosphatase

GGCAATACATCGCCCGCTCCCAGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTAGCCAGTCGCGGGGGAACAGCGCGC  >  NC_002947/4539938‑4540231                                                                                                                                                     |                                                                                                                                                    gaagggtttctggtggacgccaacggcgcgctgttcccccgcgactggctaaagcgccaggacctcgacgtgctgtgcgagcatgacatcggccactttgacggccagccggtgttcctgctggaactgcgcagcgccactgatgtgcCa                                                                                                                                                    >  2:1075887‑M1/149‑150 (MQ=255)  gCAATACATCGCCCGCTCCCAGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAg                                                                                                                                                   <  2:134048/150‑1 (MQ=255)  aagggtttctggtggacgccaacggcgcgctgttcccccgcgactggctaaagcgccaggacctcgacgtgctgtgcgagcatggcatcggccactttgacggccagccggtgttcctgctggaactgcgcagcgccactgatgtgcCa                                                                                                                                                    <  2:642636‑M1/2‑1 (MQ=255)  aagggtttctggtggacgccaacggcgcgctgttcccccgcgactggctaaagcgccaggacctcgacgtgctgtgcgagcatggcatcggccactttgacggccagccggtgttcctgctggaactgcgcagcgccactgatgtgcCa                                                                                                                                                    >  1:642636‑M1/148‑149 (MQ=255)  aagggtttctggtggacgccaacggcgcgctgttcccccgcgactggctaaagcgccaggacctcgacgtgctgtgcgagcatggcatcggccactttgacggccagccggtgttcctgctggaactgcgcagcgccactgatgtgcCAg                                                                                                                                                   <  1:332769‑M1/3‑1 (MQ=255)   cAATACATCGCCCGCTCCCAGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAgg                                                                                                                                                  >  1:1500150/1‑150 (MQ=255)             cccGCTCCCAGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGc                                                                                                                                       >  1:952527/1‑150 (MQ=255)                   cccAGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGc                                                                                                                                 <  2:405581/150‑1 (MQ=255)                     cAGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCCCCCCCCCCCCCCCCCCCCCCCCGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCt                                                                                                                               >  2:133296/1‑150 (MQ=255)                      aGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGc                                                                                                                                                 <  1:565070/132‑1 (MQ=255)                      aGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGc                                                                                                                                                 >  2:565070/1‑132 (MQ=255)                       gCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCATGCAGGTGGT‑GGGAGGTGCAGCCTgg                                                                                                                             <  2:677472/150‑1 (MQ=255)                            tttGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACAt                                                                                                                        >  1:421397/1‑150 (MQ=255)                            tttGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCAACGTGCAGATCTTTTCACCGCATCCCAGCACCTTGTAGTTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACAt                                                                                                                        <  1:778904/150‑1 (MQ=255)                                 gtgaTCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGCGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGc                                                                                                                                                 >  1:1644781/4‑121 (MQ=255)                                 gTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGCGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGc                                                                                                                                                 <  2:1644781/121‑1 (MQ=255)                                  tCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCa                                                                                                                                         >  1:1448085/1‑127 (MQ=255)                                  tCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCa                                                                                                                                         <  2:1448085/127‑1 (MQ=255)                                  tCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTgg                                                                                                                  >  1:1015835/1‑150 (MQ=255)                                       ggCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGc                                                                                                                                    >  1:651926/1‑127 (MQ=255)                                       ggCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGc                                                                                                                                    <  2:651926/127‑1 (MQ=255)                                        gCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTgc                                                                                                            >  1:1503454/1‑150 (MQ=255)                                        gCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTgc                                                                                                            >  2:157641/1‑150 (MQ=255)                                            gCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAg                                                                                                        <  1:157641/150‑1 (MQ=255)                                             ccGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCACCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGt                                                                                                       >  1:578266/1‑150 (MQ=255)                                                 aaCTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCca                                                                                                   >  1:355305/1‑150 (MQ=255)                                                    tGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCcagca                                                                                                >  2:174507/1‑150 (MQ=255)                                                     gCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCcagcag                                                                                               <  2:1503454/150‑1 (MQ=255)                                                         gaGAAGCAATTCTCGCAGGTCCAGGAGCCGATCCGTGCGGGATACCCCAGCACCTTGCAGGTGTCGAAGTCGCCTGCGAGCAAGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAac                                                                                           <  2:91796/149‑1 (MQ=255)                                                         cAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GTCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAac                                                                                           >  1:1184045/1‑150 (MQ=255)                                                          caggacctcgacgtgctgtgcgagcatggcatcggccactttgacggccagccggtgttcctgctggaactgcgcagcgccactgatgtgcCAGGCCGC‑GCCAGCTGCAGCCt                                                                                                                               <  1:1623332‑M1/22‑1 (MQ=255)                                                          caggacctcgacgtgctgtgcgagcatggcatcggccactttgacggccagccggtgttcctgctggaactgcgcagcgccactgatgtgcCAGGCCGC‑GCCAGCTGCAGCCt                                                                                                                               >  2:1623332‑M1/92‑113 (MQ=255)                                                                 aTGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTg                                                                                   <  2:421397/150‑1 (MQ=255)                                                                               aGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGc                                                                    <  2:365935/150‑1 (MQ=255)                                                                               aGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGc                                                                    <  1:978239/150‑1 (MQ=255)                                                                                ggTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGcc                                                                   >  1:1560314/1‑150 (MQ=255)                                                                                    ccGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATg                                                               >  1:152212/1‑150 (MQ=255)                                                                                           gtgCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGACCGCACGCAGGCCGC‑GCCACCTGCAGTCTGGCACATCAGTGGAGCTGCGCAGGTACTGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCt                                                        >  1:108803/1‑150 (MQ=255)                                                                                              cGGCATAGCCCAGCAGCTTGCAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCCAGCCGTCAAAGGTGGCC‑ATGCCATGATCGc                                                     >  2:192294/1‑150 (MQ=255)                                                                                                  aTAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCa                                                                                                                      <  2:737159/82‑1 (MQ=255)                                                                                                  aTAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCa                                                                                                                      >  1:737159/1‑82 (MQ=255)                                                                                                      cccAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACg                                             >  2:332769/1‑150 (MQ=255)                                                                                                       ccAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGt                                            >  2:1589964/1‑150 (MQ=255)                                                                                                        cAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGG‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑g                                                                        >  1:616115/1‑121 (MQ=255)                                                                                                        cAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGcc                                                                                                                                <  1:1036204/66‑1 (MQ=255)                                                                                                        cAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGcc                                                                                                                                >  2:1036204/1‑66 (MQ=255)                                                                                                        cAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑g                                                                        <  2:616115/121‑1 (MQ=255)                                                                                                           cACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAg                                        <  2:1500150/150‑1 (MQ=255)                                                                                                           cACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTACAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGAACAGCACGTCGAg                                        <  1:1587102/150‑1 (MQ=255)                                                                                                              cTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAac                                                                                           <  1:1581860/97‑1 (MQ=255)                                                                                                              cTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAac                                                                                           >  2:1581860/1‑97 (MQ=255)                                                                                                              cTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATg                                                               >  2:1353238/1‑124 (MQ=255)                                                                                                              cTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATg                                                               <  1:1353238/124‑1 (MQ=255)                                                                                                                tGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAacac                                                                                         >  2:1561858/1‑97 (MQ=255)                                                                                                                tGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAacac                                                                                         <  1:1561858/97‑1 (MQ=255)                                                                                                                   aGGTGTCGAAGTCGCCTTCGAGCATCAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGgc                                <  1:354658/150‑1 (MQ=255)                                                                                                                         cGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTa                          <  2:1560314/150‑1 (MQ=255)                                                                                                                          gAAGTCGCCTTCGAGCATGAAGGCACGCATGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTAg                         >  1:1111407/1‑150 (MQ=255)                                                                                                                          gAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTAg                         >  2:929781/1‑150 (MQ=255)                                                                                                                             gTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGc                                                              <  2:1528237/110‑1 (MQ=255)                                                                                                                             gTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGc                                                              >  1:1528237/1‑110 (MQ=255)                                                                                                                                gCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATg                                                          >  2:23643/1‑111 (MQ=255)                                                                                                                                gCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATg                                                          <  1:23643/111‑1 (MQ=255)                                                                                                                                  cTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGcaca                                                  >  1:678703/1‑117 (MQ=255)                                                                                                                                  cTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGcaca                                                  <  2:678703/117‑1 (MQ=255)                                                                                                                                   ttCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTAGCCAGTcgcg                >  1:865697/1‑150 (MQ=255)                                                                                                                                        gccactgatgtgcCAGGCTGCAGCTGGC‑GCGGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTcc                                    <  2:498833‑M1/112‑1 (MQ=255)                                                                                                                                        gccactgatgtgcCAGGCTGC‑AGCTGGCGCGGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTcc                                    >  1:498833‑M1/14‑125 (MQ=255)                                                                                                                                        gCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGCGGCGCTGCGCAGTTCCAGCAGGAACACCGTCTGGCCGTCAAA‑TTGGCCGATGCCATGCTCGCACAGCACGTCGCGGTCCTGGCGCTTTAGCCAGTCGCGGGTGa           >  2:1569735/1‑150 (MQ=255)                                                                                                                                          aTGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCca                                                                                                   <  2:1214725/61‑1 (MQ=255)                                                                                                                                          aTGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCca                                                                                                   >  1:1214725/1‑61 (MQ=255)                                                                                                                                           actgatgtgcCAGGCTGCAGCTGGC‑GCGGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGca                                                    <  1:454301‑M1/96‑1 (MQ=255)                                                                                                                                           actgatgtgcCAGGCTGC‑AGCTGGCGCGGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGca                                                    >  2:454301‑M1/11‑106 (MQ=255)                                                                                                                                              acgcacgcAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTAGCCAGTCGCGGGGGAACAgcg     >  1:1034101/1‑150 (MQ=255)                                                                                                                                                 cacgcaGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTAGCCAGTCGCGGGGGAACAgcgcgc  <  1:1589964/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GGCAATACATCGCCCGCTCCCAGCGAATTTGCGTCATCGGCTGGCCGCAACTGCCGCAGAAGCGATGCTCGCGGGCCCAGGTGCCGATCTGTGCGGCATAGCCCAGCACCTTGTAGGTGTCGAAGTCGCCTTCGAGCATGAACGCACGCAGGCCGC‑GCCAGCTGCAGCCTGGCACATCAGTGGCGCTGCGCAGTTCCAGCAGGAACACCGGCTGGCCGTCAAA‑GTGGCCGATGCCATGCTCGCACAGCACGTCGAGGTCCTGGCGCTTTAGCCAGTCGCGGGGGAACAGCGCGC  >  NC_002947/4539938‑4540231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.