New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 457327569 (1.150)4 (0.080) 4/190 NT 6.3% intergenic (+39/‑98) PP_4054/glgX hypothetical protein/glycogen debranching enzyme
?NC_002947 = 4573292 64 (1.350)intergenic (+56/‑81) PP_4054/glgX hypothetical protein/glycogen debranching enzyme

Only 100 of 144 total aligned reads displayed.

CAGCGGCCAAGCCGAAGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTC  >  NC_002947/4573127‑4573424
                                                                                                                                                    |                                                                                                                                                     
cAGCGGCCAAGCCGAAGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGACGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAg                                                                                                                                                      >  1:1160367/1‑150 (MQ=255)
      ccAAGCCGAAGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTtcat                                                                                                                                                <  2:1553589/150‑1 (MQ=255)
        aaGCCGAAGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTtcatca                                                                                                                                              >  1:1239022/1‑150 (MQ=255)
        aaGCCGAAGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTtcatca                                                                                                                                              >  1:1531715/1‑150 (MQ=255)
             gAAGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGgc                                                                                                                                         >  2:1488959/1‑150 (MQ=255)
               aGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGgcgc                                                                                                                                       <  2:1239022/150‑1 (MQ=255)
                 gcgcCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAt                                                                                                                                     >  2:476154‑M2/1‑149 (MQ=255)
                    ccTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAtgcgcctgtgatgaacctgta                                                                                                                                  <  1:1311681‑M1/150‑22 (MQ=255)
                     cTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtag                                                                                                                                 <  1:875128‑M2/150‑6 (MQ=255)
                          gAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcg                                                                                                                            <  2:1418195‑M2/150‑11 (MQ=255)
                           tggtgcgaccgagcgggttttctttggggtgcgggggctcatgacgatcctcgagtggccgtgatggaaggggaattgtgctgtcctgcattggccaCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCgg                                                                                                                           >  1:649488‑M1/98‑150 (MQ=255)
                            aCCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcggg                                                                                                                          >  1:208600‑M2/1‑138 (MQ=255)
                              ccAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtt                                                                                                                        <  2:847351‑M2/150‑15 (MQ=255)
                                     ggcTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgc                                                                                                                 <  1:1445005‑M2/150‑22 (MQ=255)
                                     ggcTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgg                                                                                                                           >  1:271818‑M2/1‑129 (MQ=255)
                                        tgccctgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaa                                                                                                              <  1:746073‑M2/150‑25 (MQ=255)
                                        tgccctgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaa                                                                                                              >  2:688610‑M2/1‑126 (MQ=255)
                                          ccctaccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGt                                                                                                            <  2:189323/150‑1 (MQ=255)
                                             tgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGc                                                                                                         <  1:253558/150‑1 (MQ=255)
                                             tgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGc                                                                                                         <  2:1590171/150‑1 (MQ=255)
                                                cGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttaccc                                                                                                                   <  2:418115‑M2/137‑20 (MQ=255)
                                                 tttggggtgcgggggctcatgacgatcctcgagtggccgtgatggaaggggaattgtgctgtcctgcattggccaCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGc                                                                                                                             >  1:196048‑M1/76‑126 (MQ=255)
                                                 tttggggtgcgggggctcatgacgatcctcgagtggccgtgatggaaggggaattgtgctgtcctgcattggccaCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGc                                                                                                                             <  2:196048‑M1/51‑1 (MQ=255)
                                                 gggggTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAAt                                                                                                     <  2:1184423/150‑1 (MQ=255)
                                                     gTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                 <  1:190919/150‑1 (MQ=255)
                                                        aaaCCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGAc                                                                                              >  1:347728/1‑150 (MQ=255)
                                                         aaCCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACa                                                                                             <  1:819659/150‑1 (MQ=255)
                                                          aCCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTtcatca                                                                                                                                              <  1:1437904/100‑1 (MQ=255)
                                                          aCCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTtcatca                                                                                                                                              >  2:1437904/1‑100 (MQ=255)
                                                            ccACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGca                                                                                          >  2:1316814/1‑150 (MQ=255)
                                                                 tcatgacgatcctcgagtggccgtgatggaaggggaattgtgctgtcctgcattggccaCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAg                                                                                                                                 <  2:835100‑M1/47‑1 (MQ=255)
                                                                   ggTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTcc                                                                                   <  1:1637951/150‑1 (MQ=255)
                                                                    gTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCACTTCGCGGGTACAAACCCCGGACCATGTTCATCATAAGTGCTTTGATGAGGGTGTTTACCCGCGAAGTGGCAAATGCAGGACAGCACAATTccc                                                                                  <  1:610310/150‑1 (MQ=255)
                                                                     tGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACaa                                                                                       <  1:866989/144‑1 (MQ=255)
                                                                     tGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACaa                                                                                       >  2:866989/1‑144 (MQ=255)
                                                                      gAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCt                                                                                <  1:594584/150‑1 (MQ=255)
                                                                            gCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcggg                                                                                                                          <  2:531241‑M2/102‑13 (MQ=255)
                                                                            ctcgagtggccgtgatggaaggggaattgtgctgtcctgcattggccaCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCgg                                                                                                                           <  1:1387198‑M1/53‑1 (MQ=255)
                                                                            ctcgagtggccgtgatggaaggggaattgtgctgtcctgcattggccaCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCgg                                                                                                                           >  2:1387198‑M1/49‑101 (MQ=255)
                                                                             ccccGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCa                                                                         >  2:901814/1‑150 (MQ=255)
                                                                               ccGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAtgcgcctgtgatgaacctgtaggagcgg                                                                                                                           <  2:236101‑M1/98‑29 (MQ=255)
                                                                               ccGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAtgcgcctgtgatgaacctgtaggagcgg                                                                                                                           >  1:236101‑M1/1‑70 (MQ=255)
                                                                               ccGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTg                                                                                                           <  2:787893/114‑1 (MQ=255)
                                                                                cGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACgg                                                                      <  1:912856/150‑1 (MQ=255)
                                                                                  ggCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGcc                                                                    <  2:1445005/150‑1 (MQ=255)
                                                                                        gAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTtc                                                                                                                                                  >  2:1547596/1‑66 (MQ=255)
                                                                                        gAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTtc                                                                                                                                                  <  1:1547596/66‑1 (MQ=255)
                                                                                             aGCCTACTGCCGGTTAAGCCTGTCCGGGACTATTCGCGGGCAAACCCTCTCCTACAGGTTCATCACAGGCGCCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATc                                                         <  1:772852/150‑1 (MQ=39)
                                                                                               ccTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGt                                                       <  2:1467312/150‑1 (MQ=255)
                                                                                                cTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTc                                                      <  2:347728/150‑1 (MQ=255)
                                                                                                  aCTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCAt                                                    <  2:500301/150‑1 (MQ=255)
                                                                                                    tGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGa                                                  <  2:1529389/150‑1 (MQ=255)
                                                                                                        ggTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                 <  1:1456707/99‑1 (MQ=255)
                                                                                                         gTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCGTACAGGTTCATCACTGGCCCGTGTAGGTACAGATTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGcccc                                             >  2:158291/1‑150 (MQ=38)
                                                                                                         gTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGcccc                                             >  1:26290/1‑150 (MQ=255)
                                                                                                          ttAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGccccc                                            <  1:425604/150‑1 (MQ=255)
                                                                                                          ttAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGccccc                                            >  1:507555/1‑150 (MQ=255)
                                                                                                          ttAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTCGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGccccc                                            <  1:425019/150‑1 (MQ=255)
                                                                                                              gCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCAc                                        >  1:745166/1‑150 (MQ=255)
                                                                                                                cTGTCCGGGCCTCTTCGCGGGTAAACTCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCAccc                                      >  2:1110239/1‑150 (MQ=255)
                                                                                                                     cGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAg                                 >  2:917430/1‑150 (MQ=255)
                                                                                                                     cGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAg                                 >  2:967129/1‑150 (MQ=255)
                                                                                                                     cGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGACACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAg                                 >  1:827544/1‑150 (MQ=255)
                                                                                                                      gggCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggt                                                                                                                         >  2:128549‑M2/1‑48 (MQ=255)
                                                                                                                      gggCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGa                                >  2:126435/1‑150 (MQ=255)
                                                                                                                      gggCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGa                                >  2:122231/1‑150 (MQ=255)
                                                                                                                      gggCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGa                                <  1:1418195/150‑1 (MQ=255)
                                                                                                                        gCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtg                                                                                                                                    <  1:160108‑M2/48‑3 (MQ=255)
                                                                                                                        gCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGaaa                              >  1:1492702/1‑150 (MQ=255)
                                                                                                                        gCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTCGCCAATGCAGGACAGCACAAGTCCCGTTCCATCACGGCCACTCTTGGATCGTTCTGAGTCCCCGCACCCCAAAGaaa                              >  2:1414622/1‑150 (MQ=38)
                                                                                                                         ccaCTTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCAGAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGaaaa                             <  2:59179‑M1/147‑1 (MQ=255)
                                                                                                                         ccTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGaaaa                             <  2:26290/150‑1 (MQ=255)
                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATc                                                         >  2:1168435/1‑121 (MQ=255)
                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATc                                                         <  1:1168435/121‑1 (MQ=255)
                                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAAc                            <  1:967129/150‑1 (MQ=255)
                                                                                                                           tctTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAAcc                           >  2:110756/1‑150 (MQ=255)
                                                                                                                           tctTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCCTCATAGTTCTCCGCACCCCAAAGAAAAcc                           >  2:378731/1‑150 (MQ=38)
                                                                                                                             ttCGCGGGTAAACCCGCTCCTACAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggca                         >  2:688610‑M1/1‑24 (MQ=255)
                                                                                                                             ttCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggca                         <  2:1506890‑M2/150‑110 (MQ=255)
                                                                                                                             TTCGCGGGTAAACCCGCTCCTACATGCGCCTGTGATGAACCTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCg                         <  1:726861‑M1/150‑1 (MQ=255)
                                                                                                                             TTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACg                                                                       >  2:179579‑M1/1‑104 (MQ=255)
                                                                                                                               CGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCt                       >  2:827544‑M1/1‑150 (MQ=255)
                                                                                                                                  gggTAAACCCGCTCCTACAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccg                                 >  1:418115‑M1/1‑19 (MQ=255)
                                                                                                                                    GTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTc                  <  2:273457‑M1/150‑1 (MQ=255)
                                                                                                                                    GTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTc                  <  2:273127‑M1/150‑1 (MQ=255)
                                                                                                                                       aaCCCGCTTCTACCtgctcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggcagccgccttgg               <  2:912856‑M1/150‑137 (MQ=255)
                                                                                                                                        aCCCGCTCCTACAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggccc                                                                                                       <  1:128549‑M1/61‑49 (MQ=255)
                                                                                                                                         cccGCTCCTACAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggc                                                             >  1:531241‑M1/1‑12 (MQ=255)
                                                                                                                                          ccGCTCCTACAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggcagcc                      <  2:271818‑M1/140‑130 (MQ=255)
                                                                                                                                          CCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCTCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCa            <  2:419863‑M1/150‑1 (MQ=255)
                                                                                                                                              TCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATcgc        >  1:110756‑M1/1‑150 (MQ=255)
                                                                                                                                               ccTACAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggcagccgccttgggttcggca       <  1:1529389‑M1/150‑145 (MQ=255)
                                                                                                                                                cTACAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggcagccgccttgggttcggcag      <  1:875128‑M1/150‑146 (MQ=255)
                                                                                                                                                CTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTACCATTCCATCAGGGCCACACGAGGATCTGGATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCgcgc      <  2:387726‑M1/150‑1 (MQ=255)
                                                                                                                                                 tACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggcagccgccttgggttcggcagg     <  1:1311681‑M2/150‑130 (MQ=255)
                                                                                                                                                  aCAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggcagccgccttgggttcggcaggc    <  2:5782‑M1/150‑148 (MQ=255)
                                                                                                                                                  aCAtgcgcctgtgatgaacctgtaggagcgcgtgtactggcgaagaggcccggacaggcttaacccgcagtaggctttttcaccgccctgggcttgttcaccgcagtgggtttaacccccggcagggcagccgccttgggttcggcaggc    <  2:610310‑M1/150‑148 (MQ=255)
                                                                                                                                                   cAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggc                                                                                                         <  1:160108‑M1/48‑47 (MQ=255)
                                                                                                                                                   cAtgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggc                                                                                                         >  2:160108‑M1/1‑2 (MQ=255)
                                                                                                                                                    atgcgcctgtgatgaacctgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgggtttaacccccggcagggcagccgccttgggttcggcaggcgc  >  2:476154‑M1/1‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAGCGGCCAAGCCGAAGGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTC  >  NC_002947/4573127‑4573424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.