New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4582041 =	70 (1.170)	4 (0.070)	4/234	NT	5.8%	coding (1431/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase
	?	NC_002947	4582087 =	62 (1.060)					coding (1385/3321 nt)	treSB	bifunctional trehalose synthase B/maltokinase

TTTGTCGGCGTATTGTGACAATTCGAGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTGGTAACCGTAGAGCGGGTCCATGATCG  >  NC_002947/4581897‑4582183                                                                                                                                                  |                                                                                                                                               gcaacggcggtttttcccgcgccgacccgcagcgcctggtgctgccgccgatcatggacccgctctacggttaccagactgtcaacgtcgaggcgcaaagncncgacccncattcactgctgnactggacccggcgcatgctggcggngc                                                                                                                                            >  1:1136289‑M1/146‑147 (MQ=255)    gTCGGCGTATTGTGACAATTCGAGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAg                                                                                                                                        <  1:966394/150‑1 (MQ=255)               gtgACAATTCGAGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGc                                                                                                                             <  2:576332/150‑1 (MQ=255)                   cAATTAGAGTTCGGCAGCCTGGGCGGCACTTTATACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCaaa                                                                                                                         <  2:758912/150‑1 (MQ=255)                    aaTTCGAGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCGCGGAT‑CGCGCGGATATAGGCAAGGATGCGGCGGTTGATGGGCGTGACGGTACGCAGCCTGCCGCGGCCAAAg                                                                                                                        >  1:691818/1‑150 (MQ=255)                    aaTTCGAGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGTCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAg                                                                                                                        >  1:758912/1‑150 (MQ=255)                      ttCGAGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGc                                                                                                                      >  1:593552/1‑150 (MQ=255)                          aGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGc                                                                                                                                      >  2:59572/1‑130 (MQ=255)                          aGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGc                                                                                                                                      <  1:59572/130‑1 (MQ=255)                              cGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTATGCAGGTTGCCGCGGCCAAAGGCCTTTtgct                                                                                                              <  1:387698/150‑1 (MQ=255)                                 cAGGCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGGCCTCGGTCTGGCCGGCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGGGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTgctgct                                                                                                           <  2:345920/150‑1 (MQ=255)                                  aGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCTGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCtt                                                                                                          <  2:1156826/150‑1 (MQ=255)                                     cTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTgcg                                                                                                       >  2:417865/1‑150 (MQ=255)                                      tGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGTCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTgcgc                                                                                                      >  2:283335/1‑150 (MQ=255)                                      tGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTgcgc                                                                                                      <  2:593552/150‑1 (MQ=255)                                             cACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGccc                                                                                               >  2:1542697/1‑149 (MQ=255)                                              aCGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAg                                                                                              >  1:1126852/1‑150 (MQ=255)                                                  gACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAACGGCCTTTTGCTGCTTGCGCACCGCCAGCATg                                                                                          <  1:215890/150‑1 (MQ=255)                                                  gACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATg                                                                                          >  1:144417/1‑150 (MQ=255)                                                  gACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATg                                                                                          >  2:383410/1‑150 (MQ=255)                                                   acacGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATgg                                                                                         <  2:1126852/150‑2 (MQ=255)                                                     acGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATgcgc                                                                                       <  2:662082/150‑1 (MQ=255)                                                       gTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCg                                                                                     >  2:1435675/1‑150 (MQ=255)                                                        ttgcgcACGCAGAGGATGACTTAGGGATTGCTTTCCGCGCCG‑GGTAACGCGCAGATAAAAGCAATGATGCGGCAGTTGATGGTCGTGGGGGTACGCTGGCTGCCGCGGCCAAAGGCCTTTTGCTGCGTGCGCAACGTCAGCATGCGCCgg                                                                                    <  2:1175677/145‑1 (MQ=255)                                                        ttGGCCAGGCAGGGGATGAGCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCGAGGATGCGGCGGTTGCTGGGTGTGCGGCTACGAGGGCTGCCGCGGCGAAAGGCCTTTTGCTGCTGGCGAACCGCCAGCATGCGCCgg                                                                                    <  2:144417/150‑1 (MQ=255)                                                        ttGGCCACGCAGATGATGAGCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCgg                                                                                    <  2:423512/150‑1 (MQ=255)                                                           gCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTc                                                                                 <  1:1313311/150‑1 (MQ=255)                                                            ccgctctacggttaccagactgtcaacgtcgaggcgcaaagccacgacccgcattcactgctgaactggacccggcgcatgctggcGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTg                                                                                                         <  2:1446122‑M1/40‑1 (MQ=255)                                                            ccgctctacggttaccagactgtcaacgtcgaggcgcaaagccacgacccgcattcactgctgaactggacccggcgcatgctggcGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTg                                                                                                         >  1:1446122‑M1/87‑126 (MQ=255)                                                            ccACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGc                                                                                                                             <  1:410866/105‑1 (MQ=255)                                                            ccACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGc                                                                                                                             >  2:410866/1‑105 (MQ=255)                                                             cACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCa                                                                               <  1:383410/150‑1 (MQ=255)                                                              aCGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAg                                                                              >  1:1301401/1‑150 (MQ=255)                                                                  agagGATGACGGAGGTATTGTCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGGTca                                                                          <  2:310823/150‑1 (MQ=255)                                                                           ccTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTGCAGTTCAGCAGTGAAt                                                                 >  1:536913/1‑150 (MQ=255)                                                                            cTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGTGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTcag                                                                         <  2:982004/141‑1 (MQ=255)                                                                            cTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGTGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTcag                                                                         >  1:982004/1‑141 (MQ=255)                                                                            cTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATg                                                                <  1:1023782/150‑1 (MQ=255)                                                                             tCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGc                                                               >  1:226045/1‑150 (MQ=255)                                                                               ggTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCgg                                                             <  2:908807/150‑1 (MQ=255)                                                                                   ttGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCg                                                         >  1:1205657/1‑150 (MQ=255)                                                                                    tGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGt                                                        <  1:1589625/150‑1 (MQ=255)                                                                                      ccGTCGGCGTTG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCGGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTgg                                                      <  2:633842/150‑1 (MQ=255)                                                                                       cgtcggcgtcg‑gTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGc                                                                                                                             <  2:764238/78‑1 (MQ=255)                                                                                       cgtcggcgtcg‑gTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGc                                                                                                                             >  1:764238/1‑78 (MQ=255)                                                                                           ggcgtcg‑gTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTg                                                 >  2:1225402/1‑150 (MQ=255)                                                                                           ggcgtcg‑gTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTg                                                 >  2:159675/1‑150 (MQ=255)                                                                                               tcg‑gTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGcc                                             <  2:1205657/150‑1 (MQ=255)                                                                                               gcaaagccacgacccgcattcactgctgaactggacccggcgcatgctggcGGTACGCAGGCTGCCGCGGCCAAAGGCCttt                                                                                                                  <  2:1290486‑M1/31‑1 (MQ=255)                                                                                               gcaaagccacgacccgcattcactgctgaactggacccggcgcatgctggcGGTACGCAGGCTGCCGCGGCCAAAGGCCttt                                                                                                                  >  1:1290486‑M1/52‑82 (MQ=255)                                                                                                   gTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTgcg                                                                                                       <  1:252713/89‑1 (MQ=255)                                                                                                   gTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTgcg                                                                                                       >  2:252713/1‑89 (MQ=255)                                                                                                        cTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGtt                                     >  1:49921/1‑150 (MQ=255)                                                                                                               atatAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGTGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTc                              <  2:1301401/150‑1 (MQ=255)                                                                                                                atcaGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCt                             <  1:1647723/147‑1 (MQ=255)                                                                                                                 ataGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTg                            <  1:475061/150‑1 (MQ=255)                                                                                                                 ataGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTg                            <  2:963506/150‑1 (MQ=255)                                                                                                                 ataGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGAAACGCCAGCATGCGACTTTCCCAGTTCAGCAGTTAATTCTGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTg                            <  1:1435675/150‑1 (MQ=255)                                                                                                                   aGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTGGt                          >  2:625923/1‑150 (MQ=255)                                                                                                                   aGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGACCTCTTACTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGAAGAGAATGCGGAACGTGAATTTGCGACTCGACATTGACAGTCTGGt                          >  2:315236/1‑150 (MQ=255)                                                                                                                     gCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATgc                                                                                         <  1:270704/85‑1 (MQ=255)                                                                                                                     gCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATgc                                                                                         >  2:270704/1‑85 (MQ=255)                                                                                                                     gCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGtt                                     <  1:453442/137‑1 (MQ=255)                                                                                                                     gCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGtt                                     >  2:453442/1‑137 (MQ=255)                                                                                                                        aGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCgg                                                             <  1:948704/110‑1 (MQ=255)                                                                                                                        aGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCgg                                                             >  2:948704/1‑110 (MQ=255)                                                                                                                               ggcggTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTGGTAACCGTAGAGCg              >  1:258347/1‑150 (MQ=255)                                                                                                                                gcggTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTTGTAACCGTAGAGCgg             <  1:1225402/150‑1 (MQ=255)                                                                                                                                   gTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGcc                                                                                      >  1:1191581/1‑74 (MQ=255)                                                                                                                                   gTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGcc                                                                                      <  2:1191581/74‑1 (MQ=255)                                                                                                                                   gTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGAc                                        <  2:67770/120‑1 (MQ=255)                                                                                                                                   gTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGAc                                        >  1:67770/1‑120 (MQ=255)                                                                                                                                        tGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCgg                                                             <  2:1245011/94‑1 (MQ=255)                                                                                                                                        tGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCgg                                                             >  1:1245011/1‑94 (MQ=255)                                                                                                                                           gCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTGGTAACCGTAGAGCGGGTCCATGAGcg  >  2:1212215/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                               TTTGTCGGCGTATTGTGACAATTCGAGTTCGGCAGCCTGGGCGGCACGGGACACGTTGGCCACGCAGAGGATGACCTCGGTATTGCCGTCGGCGTCG‑GTATACTCGCGGATATAGGCAAGGATGCGGCGGTTGCTGGGCGTGAGGGTACGCAGGCTGCCGCGGCCAAAGGCCTTTTGCTGCTTGCGCACCGCCAGCATGCGCCGGGTCCAGTTCAGCAGTGAATGCGGGTCGTGGCTTTGCGCCTCGACGTTGACAGTCTGGTAACCGTAGAGCGGGTCCATGATCG  >  NC_002947/4581897‑4582183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.