New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4889614 =60 (1.000)6 (0.130) 6/186 NT 11.5% intergenic (+15/‑138) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
?NC_002947 4889705 = 46 (0.990)intergenic (+106/‑47) hyi/glxR hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase

GAGATCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCT  >  NC_002947/4889468‑4889757
                                                                                                                                                  |                                                                                                                                               
gtggtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCt                                                                                                                                              <  2:722074‑M1/4‑1 (MQ=255)
   gtgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCtgtg                                                                                                                                           >  1:800141‑M1/144‑150 (MQ=255)
    tgggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTgg                                                                                                                                          >  1:1174876‑M1/143‑150 (MQ=255)
    tCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTgg                                                                                                                                          <  2:1596099/150‑1 (MQ=255)
    tCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTgg                                                                                                                                          >  2:1479520/1‑150 (MQ=255)
     gggtggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTggg                                                                                                                                         <  2:859109‑M1/9‑1 (MQ=255)
      aaCTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTgg                                                                                                                                          >  1:78122/1‑148 (MQ=255)
      aaCTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTgg                                                                                                                                          <  2:78122/148‑1 (MQ=255)
      aaCTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGa                                                                                                                                        >  2:76797/1‑150 (MQ=255)
        tggaaatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGc                                                                                                                                      >  1:1559498‑M1/139‑150 (MQ=255)
           aaatgaacaggctgtgacctgccttgtgcaggttctgagccatgggcttgctgatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaagtgtgatatcgcaagcaagctttggccCCCTGTGGGAGCggg                                                                                                                                   <  2:99210‑M1/15‑1 (MQ=255)
            aatgaacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGc                                                                                                                                  <  1:1546178‑M1/16‑1 (MQ=255)
              tgaacaggctgtgacctgccttttgcgggttctgagccatgggctttcccatgatgccggtgccgatgaaaccaattttagccatgaggaattacctctttgtaattgtgatatctcaagcaagctttggcaCCCTGTGGGAGCTGGCTc                                                                                                                                <  1:218573‑M1/18‑1 (MQ=255)
                aacaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGc                                                                                                                              <  2:1173393‑M1/20‑1 (MQ=255)
                 acaggctgtgacctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGcc                                                                                                                             <  1:394394‑M1/21‑1 (MQ=255)
                  cTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGccc                                                                                                                            <  1:648642/150‑1 (MQ=255)
                    gTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgc                                                                                                                          >  1:1002102/1‑150 (MQ=255)
                     ttCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCcgcg                                                                                                                         >  2:27835/1‑150 (MQ=255)
                           cacCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACAcc                                                                                                                   <  2:1002102/150‑1 (MQ=255)
                            cccaggACCGCATTGGTTACCAGGGCTGGGTGGGCGAGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACTCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCg                                                                                                                  <  2:252366/146‑1 (MQ=255)
                             ctgccttttgcaggttctgagccatgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCgg                                                                                                                 <  2:1455981‑M1/33‑1 (MQ=255)
                                    cGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCCCCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCCCCCCCGCCACCACCGGCAACGcc                                                                                                          >  2:227586/1‑150 (MQ=255)
                                      cATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCgg                                                                                                        >  1:942409/1‑150 (MQ=255)
                                      cATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACGCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCgg                                                                                                        <  1:76797/150‑1 (MQ=255)
                                               ccAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACAcc                                                                                                                   <  2:736529/130‑1 (MQ=255)
                                               ccAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACAcc                                                                                                                   >  1:736529/1‑130 (MQ=255)
                                                   catgggcttgcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGa                                                                                           >  2:1401029‑M1/96‑150 (MQ=255)
                                                    gCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAg                                                                                          >  2:336328/1‑150 (MQ=255)
                                                    gCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAg                                                                                          <  2:254052/150‑1 (MQ=255)
                                                          aagcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGc                                                                                                                                      <  1:361734‑M1/12‑1 (MQ=255)
                                                          aagcccatgatgccggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGc                                                                                                                                      >  2:361734‑M1/89‑100 (MQ=255)
                                                                  gatgccggtgccgatgaanccgattttagncatgagnaatnacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTcgcg                                                                            >  2:1438607‑M1/81‑150 (MQ=255)
                                                                   aGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCgg                                                                           <  1:1479520/150‑1 (MQ=255)
                                                                       gaaGCCGCTGACCACCACCGAAGCAGGCCTGGGTCGGCCGTAAACCCACAACGCACTCTGAGGAACAACTCGAGACCCTGTGGGAGTGGGCTCGCCCGTGACCATCACCAAATCCGGTGCCATCAACCGGGTTGTCTGCCTCGCGGGCGa                                                                       >  2:218573/2‑150 (MQ=255)
                                                                       cggtgccgatgaaaccgattttagccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCACACTCCGAGTTGTCTGCTTCGCGGGCGa                                                                       >  1:1455981‑M1/76‑150 (MQ=255)
                                                                       cAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGATGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGa                                                                       <  2:29039/150‑1 (MQ=255)
                                                                       cAAGCCGCTGACAACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGa                                                                       <  1:336328/150‑1 (MQ=255)
                                                                        aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCCCGGGCGAg                                                                      >  2:422289/1‑150 (MQ=255)
                                                                        aaGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGACATCCACCGAGTTGTCTGCTTCGCGGGCGAg                                                                      >  1:1097588/1‑150 (MQ=255)
                                                                           ccGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGccc                                                                   <  2:323978/150‑1 (MQ=255)
                                                                           ccGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGccc                                                                   <  1:747261/150‑1 (MQ=255)
                                                                           ccGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGccc                                                                   <  1:746887/150‑1 (MQ=255)
                                                                                   caccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTACcac                                                           >  1:740344/1‑150 (MQ=255)
                                                                                     ccaccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCCCAg                                                         >  2:1546178/1‑150 (MQ=255)
                                                                                      caccGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGTGGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAgg                                                        >  1:99210/1‑150 (MQ=255)
                                                                                      caccGAAGCGGGCCTGAGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAgg                                                        >  1:1490598/1‑150 (MQ=255)
                                                                                          gAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACAGGCCAAACCGATCCCAAAGCCATATAGATCTACGTCGCGGGCGAGCCCGCCCACACAgggggg                                                    >  2:1251416/1‑149 (MQ=255)
                                                                                            aGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGa                                                                                           >  1:545442/1‑109 (MQ=255)
                                                                                            aGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGa                                                                                           <  2:545442/109‑1 (MQ=255)
                                                                                               ccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTc                                                                                                                                <  2:966698‑M1/18‑1 (MQ=255)
                                                                                               ccatgagaaattacctctttgtaattgtgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTc                                                                                                                                >  1:966698‑M1/52‑69 (MQ=255)
                                                                                                 gCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgct                                             >  2:1211199/1‑150 (MQ=255)
                                                                                                 gCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgct                                             >  2:1123197/1‑150 (MQ=255)
                                                                                                     gggCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAgcttgct                                         <  2:1165510/150‑1 (MQ=255)
                                                                                                        ctggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTga                                      <  1:1211199/150‑1 (MQ=255)
                                                                                                        ctggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTga                                      <  2:1490598/150‑1 (MQ=255)
                                                                                                        ctggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTga                                      >  2:572092/1‑150 (MQ=255)
                                                                                                          ggctgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgaga                                    <  1:1123197/150‑1 (MQ=255)
                                                                                                          ggctgAAAACCCACAACGCAATCTGAGGAACAACTCGAGATCTTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgaga                                    <  1:1251416/150‑1 (MQ=255)
                                                                                                          ggatgAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACCCCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgaga                                    <  2:1209704/147‑1 (MQ=255)
                                                                                                                    ccACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAAtt                          >  2:1490147/1‑150 (MQ=255)
                                                                                                                      acaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGc                                                                                                           <  1:194752/67‑1 (MQ=255)
                                                                                                                      acaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGc                                                                                                           >  2:194752/1‑67 (MQ=255)
                                                                                                                      acaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACaa                            <  2:1071513/146‑1 (MQ=255)
                                                                                                                      acaACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACaa                            >  1:1071513/1‑146 (MQ=255)
                                                                                                                        aaCGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCAGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACaa                      >  2:947945/1‑150 (MQ=255)
                                                                                                                          tgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTcgc                                                                             >  1:567998‑M1/25‑93 (MQ=255)
                                                                                                                          tgatatctcaagcaagctttggccCCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTcgc                                                                             <  2:567998‑M1/69‑1 (MQ=255)
                                                                                                                                 tGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggggg                                                     >  2:970125/1‑110 (MQ=255)
                                                                                                                                 tGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAggggg                                                     <  1:970125/110‑1 (MQ=255)
                                                                                                                                       acaacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCa       <  1:572092/150‑1 (MQ=255)
                                                                                                                                       acaacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCa       <  1:1490147/150‑1 (MQ=255)
                                                                                                                                       acaacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCa       <  1:1170945/150‑1 (MQ=255)
                                                                                                                                        caacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGACATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCAt      <  2:1097588/150‑1 (MQ=255)
                                                                                                                                         aacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgaga                                    >  2:1236544/1‑119 (MQ=255)
                                                                                                                                         aacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTgaga                                    <  1:1236544/119‑1 (MQ=255)
                                                                                                                                         aacTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATg     >  1:1448592/1‑150 (MQ=255)
                                                                                                                                          acTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATgg    >  1:128065/1‑150 (MQ=255)
                                                                                                                                          acTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCAGGTGCCATCCACCGAGTTGTCTGCTTCGCAGGCAAGCCCGCTCCCACAGCGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAAGTAATTTCTCATgg    >  1:1266905/1‑150 (MQ=37)
                                                                                                                                            tCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTATCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCt  >  2:394394/1‑150 (MQ=255)
                                                                                                                                              gggACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATgg    >  2:1066351/1‑146 (MQ=255)
                                                                                                                                              gggACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATgg    <  1:1066351/146‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                               
GAGATCAACTACCGCTTCCTGTTCGAACACCTGGACCGCATTGGCTACCAGGGCTGGGTGGGCGCGGAGTACAAGCCGCTGACCACCACCGAAGCGGGCCTGGGCTGGCTGAAAACCCACAACGCAATCTGAGGAACAACTCGGGACCCTGTGGGAGCGGGCTCGCCCGCGAACACCGGCAAAGCCGGTGCCATCCACCGAGTTGTCTGCTTCGCGGGCGAGCCCGCTCCCACAGGGGGCCAAAGCTTGCTTGAGATATCACAATTACAAAGAGGTAATTTCTCATGGCT  >  NC_002947/4889468‑4889757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.