New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5333232 =92 (1.540)9 (0.160) 6/222 NT 12.2% intergenic (+16/‑227) gluQ/PP_5704 glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein
?NC_002947 5333314 = 45 (0.810)intergenic (+98/‑145) gluQ/PP_5704 glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein

Only 100 of 113 total aligned reads displayed.

GCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTG  >  NC_002947/5333087‑5333381
                                                                                                                                                 |                                                                                                                                                       
gcTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTcgc                                                                                                                                                     >  2:1514046/1‑150 (MQ=255)
  tggcctcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCgg                                                                                                                                                   <  1:307309‑M1/7‑1 (MQ=255)
  tggcctcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCgg                                                                                                                                                   <  1:232729‑M1/7‑1 (MQ=255)
  tggcctcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCgg                                                                                                                                                   <  2:302965‑M1/7‑1 (MQ=255)
  tggcctcgatggttgggcgctacgggcttgaacttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcgtttgtttttagggggggtacctgtgccggccctTTCGCgg                                                                                                                                                   >  1:1566235‑M1/144‑150 (MQ=255)
  tGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCgg                                                                                                                                                   >  2:1312835/1‑150 (MQ=255)
    gggCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGgc                                                                                                                                                 >  2:1494786/1‑150 (MQ=255)
        aGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGACTTGCGCTGAACCTTTACCGGCCTCTTCGCGGgcgcgc                                                                                                                                             <  2:621595/150‑1 (MQ=255)
         ggAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGcc                                                                                                                                            <  2:395545/150‑1 (MQ=255)
             acagacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCGTTACCGGCCTCTTCGCTGGCGCGCCCGcc                                                                                                                                        >  1:1470638/1‑149 (MQ=255)
               agacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCgg                                                                                                                                                   >  2:1460029/1‑137 (MQ=255)
               agacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCgg                                                                                                                                                   <  1:1460029/137‑1 (MQ=255)
               agacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTcc                                                                                                                                      >  2:315930/1‑150 (MQ=255)
               agacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTcc                                                                                                                                      >  2:491671/1‑150 (MQ=255)
               agacCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGACGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTcc                                                                                                                                      <  1:3179/150‑1 (MQ=255)
                  cccGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCcac                                                                                                                                   >  2:652710/1‑150 (MQ=255)
                   ccGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTcc                                                                                                                                      >  2:1047388/1‑146 (MQ=255)
                   ccGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTcc                                                                                                                                      <  1:1047388/146‑1 (MQ=255)
                   ccGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCcaca                                                                                                                                  <  1:315930/150‑1 (MQ=255)
                        aCTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑c                                                                                                                           <  1:491671/150‑1 (MQ=255)
                          tgctgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTCCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCa                                                                                                                         >  2:1278310/1‑150 (MQ=255)
                          tgctgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCa                                                                                                                         >  1:923367/1‑150 (MQ=255)
                            ctgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCAcg                                                                                                                       >  1:662677/1‑150 (MQ=255)
                             tgTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCAGCCTCTTCGCgg                                                                                                                                                   <  1:500612/123‑1 (MQ=255)
                                 acttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCgg                                                                                                                                                   >  2:1074359‑M1/113‑119 (MQ=255)
                                 acttattattggcgcaaatggcaggggggatgctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCgg                                                                                                                                                   <  1:1074359‑M1/7‑1 (MQ=255)
                                  gCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTc                                                                                                                                       <  2:1274068/130‑1 (MQ=255)
                                  gCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGaa                                                                                                                              <  1:1325259/139‑1 (MQ=255)
                                  gCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGaa                                                                                                                              >  2:1325259/1‑139 (MQ=255)
                                   cGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCtt                                                                                                                <  1:805867/150‑1 (MQ=255)
                                        ccGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑c                                                                                                                           >  2:429113/1‑134 (MQ=255)
                                        ccGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAgg                                                                                                           <  2:742671/150‑1 (MQ=255)
                                          ggCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGcc                                                                                                         >  1:559084/1‑150 (MQ=255)
                                                  tGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCt                                                                                                 >  1:1282122/1‑150 (MQ=255)
                                                    cTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTAc                                                                                               <  1:1312835/150‑1 (MQ=255)
                                                    cTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTAc                                                                                               <  1:652710/150‑1 (MQ=255)
                                                      ggCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTggg                                                                                                   <  1:87377/144‑1 (MQ=255)
                                                      ggCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTggg                                                                                                   >  2:87377/1‑144 (MQ=255)
                                                          gTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         <  2:559084/150‑1 (MQ=255)
                                                           tCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTAGCCCACGCCGCCTTCAAGGCCTGTGGGCTACCtgtg                                                                                          <  1:286006/150‑1 (MQ=255)
                                                           tCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         >  1:1035843/1‑149 (MQ=255)
                                                           tCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         <  2:1035843/149‑1 (MQ=255)
                                                            cgcgcgcgcgCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGa                                                                                       <  2:928331/150‑1 (MQ=255)
                                                             gcgcgcgcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAg                                                                                      >  1:546112/1‑150 (MQ=255)
                                                                gctagcgggaatccacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtaccggcctcTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCgg                                                                                   >  1:629957‑M1/82‑150 (MQ=255)
                                                                cgcgcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgggggtgg                                                                                   <  2:63507/150‑6 (MQ=255)
                                                                   gcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGgcgcgc                                                                                                                                             <  2:1182437/91‑1 (MQ=255)
                                                                   gcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGgcgcgc                                                                                                                                             >  1:1182437/1‑91 (MQ=255)
                                                                   gcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCAc                                                                                                                        <  2:959554/110‑1 (MQ=255)
                                                                   gcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCAc                                                                                                                        >  1:959554/1‑110 (MQ=255)
                                                                   gcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGc                                                                                     <  1:710448/145‑1 (MQ=255)
                                                                   gcgcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGc                                                                                     >  2:710448/1‑145 (MQ=255)
                                                                     gcgaTGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTTTGGGAGCGGGCATg                                                                              >  1:1645838/4‑150 (MQ=255)
                                                                     gcAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATg                                                                              >  2:1062576/1‑150 (MQ=255)
                                                                      cAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGc                                                                             >  1:1182870/1‑150 (MQ=255)
                                                                        aTGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGccc                                                                           <  2:416858/150‑1 (MQ=255)
                                                                         tGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCcg                                                                          <  1:1494786/150‑1 (MQ=255)
                                                                             ggcCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGaa                                                                      <  2:546112/150‑1 (MQ=255)
                                                                             cacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATg                                                                              <  1:869976‑M1/74‑1 (MQ=255)
                                                                             cacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATg                                                                              >  2:869976‑M1/69‑142 (MQ=255)
                                                                             cacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCGGGCATGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCgg                                                                                   >  2:1607758‑M1/69‑137 (MQ=255)
                                                                             cacagcgttcgccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTCGCGGGCATGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCgg                                                                                   <  1:1607758‑M1/69‑1 (MQ=255)
                                                                                   aaGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGcc                                                                <  1:1514046/150‑1 (MQ=255)
                                                                                   aaGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTGCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGcc                                                                >  1:442753/1‑150 (MQ=255)
                                                                                     gCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCgg                                                              <  2:1282122/150‑1 (MQ=255)
                                                                                       gATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGca                                                            >  1:665833/1‑150 (MQ=255)
                                                                                       gATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGca                                                            >  1:1368891/1‑150 (MQ=255)
                                                                                        ccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTcgcg                                                                                                                                                    >  1:1268968‑M1/58‑63 (MQ=255)
                                                                                        ccaagggtttgaatttactgggcttttgtttttagggggggtacctgtgccggccctTTcgcg                                                                                                                                                    <  2:1268968‑M1/6‑1 (MQ=255)
                                                                                        aTCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCAcgcc                                                                                                                     >  1:1052775/1‑92 (MQ=255)
                                                                                          cgcgCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAg                                                         <  2:1446153/150‑1 (MQ=255)
                                                                                           gcgcAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGGGAAAGGGCCGGCACAgg                                                        >  1:565210/1‑150 (MQ=255)
                                                                                               tttgaatttactgggcttttgtttttagggggggtacctgtgccggcctcTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         <  2:617516‑M1/63‑1 (MQ=255)
                                                                                               tttgaatttactgggcttttgtttttagggggggtacctgtgccggcctcTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         >  1:617516‑M1/51‑113 (MQ=255)
                                                                                                 cGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcccc                                                  <  1:1062576/150‑1 (MQ=255)
                                                                                                      cACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTAcccc                                                  <  2:1447921/145‑1 (MQ=255)
                                                                                                       aCGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTaa                                            >  2:232729/1‑150 (MQ=255)
                                                                                                          tgggcttttgtttttagggggggtacctgtgccggccctTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         <  2:429974‑M1/63‑1 (MQ=255)
                                                                                                          tgggcttttgtttttagggggggtacctgtgccggccctTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTgg                                                                                         >  1:429974‑M1/40‑102 (MQ=255)
                                                                                                               agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACTGGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                    <  1:198832/150‑1 (MQ=255)
                                                                                                               agagGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                    <  2:565210/150‑1 (MQ=255)
                                                                                                                   gCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACaaaa                                    >  1:963565/1‑146 (MQ=255)
                                                                                                                   gCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGccc                                >  1:1466655/1‑150 (MQ=255)
                                                                                                                   gCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGccc                                >  1:1391050/1‑150 (MQ=255)
                                                                                                                    cTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCa                               <  2:665833/150‑1 (MQ=255)
                                                                                                                     tGATTTGCGCTTAACCTTTACCGGCATCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAg                              >  2:477700/1‑150 (MQ=255)
                                                                                                                            cgcTGAACCTTTACCGGCCTCTTCCCGGAGCCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTc                       >  1:1277410/1‑150 (MQ=255)
                                                                                                                                gAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTTTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAAc                   <  2:1645838/150‑1 (MQ=255)
                                                                                                                                    cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCgg                                                                                   <  2:637900/82‑1 (MQ=255)
                                                                                                                                    cTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCgg                                                                                   >  1:637900/1‑82 (MQ=255)
                                                                                                                                     tttACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAGACTAAAGCCCAGTAAATTCAAACCCTTg              <  1:1278310/150‑1 (MQ=255)
                                                                                                                                      ttACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTgg             <  2:1368891/150‑1 (MQ=255)
                                                                                                                                      ttACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTgg             <  2:165739/150‑1 (MQ=255)
                                                                                                                                        aCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGccc                                >  1:1338828/1‑129 (MQ=255)
                                                                                                                                        aCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGccc                                <  2:1338828/129‑1 (MQ=255)
                                                                                                                                         ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTg              <  2:493836/146‑1 (MQ=255)
                                                                                                                                         ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTg              >  1:493836/1‑146 (MQ=255)
                                                                                                                                                ctTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAACGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgt   <  2:1182870/150‑1 (MQ=255)
                                                                                                                                                 TTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgtg  >  2:1391050‑M1/1‑150 (MQ=255)
                                                                                                                                                 TTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCtgtg  <  1:302965‑M1/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                       
GCTGGGGCAGGAGACAGACCCGGAACTGCTGTTGGCGACGCCGGCAGAGGTGCTGGCAGTCGCGCGCGCGCAATGGCGGCCGGAAGCGATCGCGCAGCGGACCACGGTGCCAGAGGCTGATTTGCGCTGAACCTTTACCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAA‑‑CCACGCCGCCTTCAAGGCCTGTGGGCTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTG  >  NC_002947/5333087‑5333381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.