New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5596996 =	61 (1.020)	3 (0.050)	3/234	NT	4.6%	coding (446/1434 nt)	PP_4923	outer membrane efflux protein
	?	NC_002947	5597018 =	64 (1.100)					coding (468/1434 nt)	PP_4923	outer membrane efflux protein
Rejected: Frequency below/above cutoff threshold.

GCGACCCTGGCTCAGCCGATCTTCCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACGGG  >  NC_002947/5596848‑5597139                                                                                                                                                     |                                                                                                                                                ctggcgttcggcgatgatccggttggcccgtgcagtgtcataactggcttgggattgcagcacgtcggtcttgtccgaaaggcccacgtcgaaacgctcgttggactgatccagctggcgcttgaaggcggcttcttctgccttggtggc                                                                                                                                                <  1:945772‑M1/2‑1 (MQ=255)              aGCCGATCTTCCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAAcc                                                                                                                                   <  2:250237/150‑1 (MQ=255)                 cGATCTTCCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGGCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAGCTACTTCGCCGTCCTCCGCGCCCAGGACAACCTgg                                                                                                                                <  1:906046/150‑1 (MQ=255)                  gATCTTCCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGgc                                                                                                                               <  1:353287/150‑1 (MQ=255)                  gATCTTCCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCGGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGgc                                                                                                                               >  2:738479/1‑150 (MQ=255)                   aTCTTCCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCTGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGgcc                                                                                                                              <  2:118581/150‑1 (MQ=255)                        ccGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGccac                                                                                                                         <  1:889522/150‑1 (MQ=255)                              tGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGccc                                                                                                                                            <  1:1644194/125‑1 (MQ=255)                              tGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGccc                                                                                                                                            >  2:1644194/1‑125 (MQ=255)                              tGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGATGTAGGCGACCGAGCAAGACGAGCAGCAGGGCACGGCACACAGCTACTTCGCCGTCCTCCGCGCCCAGGACAACTTGACCGCGACCAAGGc                                                                                                                   >  1:372392/1‑150 (MQ=255)                                  cGCTGGTTCCAGTTGCACGCCGCCGAAGCAGTCAACGAACACGCAGCTGTGCAGCTGTCAGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCagaa                                                                                                               <  2:1591588/150‑1 (MQ=255)                                        ttCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAgcc                                                                                                         >  1:465614/1‑150 (MQ=255)                                            aGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCt                                                                                                     >  2:1340549/1‑150 (MQ=255)                                              ttGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTc                                                                                                   <  1:1485222/150‑1 (MQ=255)                                                gCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAACACCTGCTCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCCCGCCCAGGACAACCTGGCCGCAGCCACGGCAGAAGAGGACGCCTTCag                                                                                                 >  2:352634/1‑149 (MQ=255)                                                gCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCaa                                                                                                 <  1:1340549/150‑1 (MQ=255)                                                  aaGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAgc                                                                                               <  1:1486252/150‑1 (MQ=255)                                                  aaGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAgc                                                                                               <  2:465614/150‑1 (MQ=255)                                                             gCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGAt                                                                                    <  1:1066630/150‑1 (MQ=255)                                                             gCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGAt                                                                                    <  1:1429630/150‑1 (MQ=255)                                                              cAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATc                                                                                   <  2:486661/150‑1 (MQ=255)                                                               tgTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGCTGAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCa                                                                                  <  1:1251263/149‑1 (MQ=255)                                                                      gAACAGTCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAAc                                                                           >  2:636391/1‑150 (MQ=255)                                                                      gAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAAc                                                                           >  2:945772/1‑150 (MQ=255)                                                                           ggCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGt                                                                                >  1:241941/1‑140 (MQ=255)                                                                           ggCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGt                                                                                <  2:241941/140‑1 (MQ=255)                                                                                cccTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCg                                                                 >  1:1417707/1‑150 (MQ=255)                                                                                          gTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACGTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCt                                                       <  1:352634/150‑1 (MQ=255)                                                                                           tCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGc                                                                       >  2:49859/1‑133 (MQ=255)                                                                                           tCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGc                                                                       <  1:49859/133‑1 (MQ=255)                                                                                              gCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTCGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCg                                                   >  2:746351/1‑150 (MQ=255)                                                                                                gACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCagaa                                                                                                               >  1:1363296/1‑88 (MQ=255)                                                                                                gACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCagaa                                                                                                               <  2:1363296/88‑1 (MQ=255)                                                                                                        aaaaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCtt                                                                                                    <  1:1506168/91‑1 (MQ=255)                                                                                                        aaaaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCtt                                                                                                    >  2:1506168/1‑91 (MQ=255)                                                                                                        aaaaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCg                                         >  1:373627/1‑150 (MQ=255)                                                                                                         aacccTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGa                                        <  2:372392/147‑1 (MQ=255)                                                                                                          aaCCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCATCGGAAGGGGGGCCTTTCGGACAAGACCGAc                                       >  1:1235208/1‑150 (MQ=255)                                                                                                            ccTGATCCTGCAAACCGCGCAAAACTACTTCGCCGGCCTCCGCGCCCAGGACAACCTGGCTGCCACCACGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCTGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGt                                     <  2:643503/150‑1 (MQ=255)                                                                                                             cTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACACCCTGGCCTCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCa                                                                                           >  2:964668/1‑95 (MQ=255)                                                                                                             cTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCa                                                                                           <  1:964668/95‑1 (MQ=255)                                                                                                               gATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAg                                                                                                                     <  2:640466/67‑1 (MQ=255)                                                                                                               gATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAg                                                                                                                     >  1:640466/1‑67 (MQ=255)                                                                                                                aTCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGtgctg                                 <  1:636391/150‑1 (MQ=255)                                                                                                                 tCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGtgctgc                                >  1:1075113/1‑150 (MQ=255)                                                                                                                    tGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGTACAAGACCGACGTGCTGCAAt                             >  2:878657/1‑150 (MQ=255)                                                                                                                          ccGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTg                                                            <  1:77978/113‑1 (MQ=255)                                                                                                                          ccGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTg                                                            >  2:77978/1‑113 (MQ=255)                                                                                                                           cgcgCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGc                      >  2:781787/1‑150 (MQ=255)                                                                                                                             cgcAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCa                    <  2:1417707/150‑1 (MQ=255)                                                                                                                             cgcAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCa                    >  1:550314/1‑150 (MQ=255)                                                                                                                              gcAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAg                   <  2:373627/150‑1 (MQ=255)                                                                                                                                  ggcttcttctgccttggtgGCGGCCAGGTTGTCCTGGGCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCGGCAATCCCAAGCCAGTTAt               <  1:902575‑M1/131‑1 (MQ=255)                                                                                                                                  aaCTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGTACAAGACCGACGTGCTGCAATCCCAAGCCAGTTAt               <  1:878657/150‑1 (MQ=255)                                                                                                                                   gcttcttctgccttggtgGCGGCCAGGTTGTCCTGGGCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTc                                                                  >  2:1220153‑M1/19‑98 (MQ=255)                                                                                                                                   gcttcttctgccttggtgGCGGCCAGGTTGTCCTGGGCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTc                                                                  <  1:1220153‑M1/80‑1 (MQ=255)                                                                                                                                   actactTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATg              <  2:550314/150‑1 (MQ=255)                                                                                                                                     tactTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGac            >  1:195558/1‑150 (MQ=255)                                                                                                                                        ttCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGt                                                             >  1:386326/1‑98 (MQ=255)                                                                                                                                        ttCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACt         >  1:1426813/1‑150 (MQ=255)                                                                                                                                        ttCGCCGGCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGt                                                             <  2:386326/98‑1 (MQ=255)                                                                                                                                            ccGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCAc     >  1:660599/1‑150 (MQ=255)                                                                                                                                              gTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGaca           >  2:713943/1‑142 (MQ=255)                                                                                                                                              gTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGaca           <  1:713943/142‑1 (MQ=255)                                                                                                                                               tcctccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACggg  <  2:1075113/150‑1 (MQ=255)                                                                                                                                                  tccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTggg                                                          <  2:662273/91‑1 (MQ=255)                                                                                                                                                  tccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTggg                                                          >  1:662273/1‑91 (MQ=255)                                                                                                                                                   ccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACa                                               >  2:895144/1‑101 (MQ=255)                                                                                                                                                   ccGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACa                                               <  1:895144/101‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                GCGACCCTGGCTCAGCCGATCTTCCGCGCTGATCGCTGGTTCCAGTTGCAAGCCGCCGAAGCAGTCAACGAACAGGCAGCCCTGGAGCTGTCGGCGACCGAGCAAAACCTGATCCTGCAAACCGCGCAAAACTACTTCGCCGTCCTCCGCGCCCAGGACAACCTGGCCGCCACCAAGGCAGAAGAAGCCGCCTTCAAGCGCCAGCTGGATCAGTCCAACGAGCGTTTCGACGTGGGCCTTTCGGACAAGACCGACGTGCTGCAATCCCAAGCCAGTTATGACACTGCACGGG  >  NC_002947/5596848‑5597139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.