New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 726940	64 (1.070)	7 (0.120)	5/226	NT	10.0%	intergenic (‑184/+83)	PP_0620/PP_0621	GntR family transcriptional regulator/hypothetical protein
	?	NC_002947	5571519 =	66 (1.170)					intergenic (+90/+51)	queG/yicG	epoxyqueuosine reductase/inner membrane protein

ATCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCG  >  NC_002947/5571372‑5571667                                                                                                                                                    |                                                                                                                                                     aTCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTc                                                                                                                                                    <  2:403688/150‑1 (MQ=255)  tCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTcg                                                                                                                                                   >  1:177409/1‑150 (MQ=255)     gaattttgcccggacggttcaatgctggcgggggggaggggtcgtaaagggtgtgaaagtgtcggggagggatatgtggaacacgaaattgcagataaaaactgtgggagcgggcgtgcccgcgaacaccggcttcgccggtgTTCGCgg                                                                                                                                                <  1:126126‑M2/7‑1 (MQ=255)     gAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCgg                                                                                                                                                <  2:1565874/150‑1 (MQ=255)      aaTTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCggg                                                                                                                                               >  1:479248/1‑150 (MQ=255)         tGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAc                                                                                                                                            >  2:459172‑M2/1‑149 (MQ=255)            ggcgcgGGCATGTGGAGTGGGCGCGGGCCCGTCACGGACCTCAATAGCGACCAGCCTCAGAGCATGCGCGATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACCCAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcc                                                                                                                                         >  2:770676‑M2/2‑146 (MQ=255)                cgAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgct                                                                                                                                     <  1:1270050‑M2/150‑9 (MQ=255)                 gAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctc                                                                                                                                    <  1:1316537‑M2/150‑10 (MQ=255)                   gCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctccc                                                                                                                                  >  2:263935‑M2/1‑139 (MQ=255)                     aTGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATAGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctcccac                                                                                                                                <  2:1120886‑M2/150‑14 (MQ=255)                       gtgGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAt                                                                                                                              >  1:681932/1‑150 (MQ=255)                             tGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCa                                                                                                                        >  1:559600/1‑150 (MQ=255)                               ggCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATg                                                                                                                             >  2:406453/1‑143 (MQ=255)                               ggCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATg                                                                                                                             <  1:406453/143‑1 (MQ=255)                               ggCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATg                                                                                                                      <  2:87070/150‑1 (MQ=255)                                      gCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTcgcg                                                                                                                                                 >  2:432862/1‑116 (MQ=255)                                      gCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTcgcg                                                                                                                                                 <  1:432862/116‑1 (MQ=255)                                       cccGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCtt                                                                                                              <  1:1215260/150‑1 (MQ=255)                                       cccGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTAACCATGCACGCCCGCTCCCACATGGGCCATGTTGCGCtt                                                                                                              <  1:1365294/150‑1 (MQ=38)                                        ccGTCACGGAGCTCAATAGCGACCAGCNTCAGAGCATGCGNCATCCTNGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTg                                                                                                             >  1:996454/1‑150 (MQ=255)                                        ccGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTg                                                                                                             >  1:1379941/1‑150 (MQ=255)                                            cACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTaaa                                                                                                         <  2:1379941/150‑1 (MQ=255)                                                  gCTCAATTGCGACCAGCCTCAGAGCATGTGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACATGGAACGCCACCGGCTTCGCCGGTGTTCGCGGGCACACCCGCTCCCACATGGGCCATGGTGCGCTTGTAAATTGcat                                                                                                   <  2:136075/150‑3 (MQ=37)                                                  gCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGt                                                                                                   >  1:1114042/1‑150 (MQ=255)                                                  gCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGt                                                                                                   <  1:1245978/150‑1 (MQ=255)                                                  gCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGAGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGt                                                                                                   <  2:1316537/150‑1 (MQ=255)                                                        tAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCActgc                                                                                             >  2:1455985/1‑150 (MQ=255)                                                          gCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGCCACGCCAGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCActgctg                                                                                           <  2:230109/150‑1 (MQ=255)                                                           cGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTgg                                                                                          <  2:1270050/150‑1 (MQ=255)                                                            gACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctccc                                                                                                                                  >  2:416191‑M2/1‑98 (MQ=255)                                                            gACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctccc                                                                                                                                  <  1:416191‑M2/109‑12 (MQ=255)                                                             aCCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTc                                                                                        >  2:624528/1‑150 (MQ=255)                                                                  ccTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGt                                                                                   <  1:1455985/150‑1 (MQ=255)                                                                  ccTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGt                                                                                   <  2:479248/150‑1 (MQ=255)                                                                   cTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTa                                                                                  <  1:1120886/150‑1 (MQ=255)                                                                    tCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTa                                                                                  >  2:1303488/1‑149 (MQ=255)                                                                    tCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTa                                                                                  <  1:1303488/149‑1 (MQ=255)                                                                        agCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGa                                                                             >  1:419221/1‑150 (MQ=255)                                                                         gCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGaa                                                                            <  2:309641/150‑1 (MQ=255)                                                                           aTGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACt                                                                          >  1:1528135/1‑150 (MQ=255)                                                                             gcgcCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTg                                                                        <  2:1528135/150‑1 (MQ=255)                                                                              cgcCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGTTGGTCGTTGTAGTGGAACTTgg                                                                       <  2:681932/150‑1 (MQ=255)                                                                              cgcCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTgg                                                                       >  1:1639074/1‑150 (MQ=255)                                                                               gcCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTg                                                                                                             >  1:1586772/1‑111 (MQ=255)                                                                               gcCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTg                                                                                                             <  2:1586772/111‑1 (MQ=255)                                                                               gcCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGaa                                                                            <  2:435969/144‑1 (MQ=255)                                                                               gcCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGaa                                                                            >  1:435969/1‑144 (MQ=255)                                                                                 cATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTa                                                                                  <  2:633794/136‑1 (MQ=255)                                                                                 cATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTa                                                                                  >  1:633794/1‑136 (MQ=255)                                                                                 cATCCTTGTGGGAGCGAGCGCGCCCGAGAAGCAGGCAACACAGGGAATGGCACAGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGCGCCATGTTGCGCTTGTAAATTGCCTCACTGCTGGTCGTTGTAGTGGAACTTgggta                                                                    >  2:106367/1‑148 (MQ=37)                                                                                    ccTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTg                                                                               >  2:804840/1‑136 (MQ=255)                                                                                    ccTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTg                                                                               <  1:804840/136‑1 (MQ=255)                                                                                      ttGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTcc                                                               >  2:812987/1‑150 (MQ=255)                                                                                               cGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAg                                                      <  2:858940/150‑1 (MQ=255)                                                                                                   cgcgcCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGa                                                  <  2:1057821/150‑1 (MQ=255)                                                                                                     cccccGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGAtt                                                <  2:1114042/148‑1 (MQ=255)                                                                                                      gcCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCGGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTg                                               <  2:685827/150‑1 (MQ=255)                                                                                                      gcCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctcccacaaggatggcgcatgctctgaggctggtcgctattgagctccgtgacgggccagcgcccactccacatgctcgcgcaccaat                                               <  2:1138843‑M2/150‑95 (MQ=255)                                                                                                        ccGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctcccacaaggatggcgcatgctctgaggctggtcgcta                                                                                                >  2:1150299‑M2/1‑54 (MQ=255)                                                                                                        ccGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCAcgcccgctcccacaaggatggcgcatgctctgaggctggtcgcta                                                                                                <  1:1150299‑M2/99‑46 (MQ=255)                                                                                                            gAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACa                                         <  2:996454/150‑1 (MQ=255)                                                                                                                 aGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGAtt                                                >  2:93433/1‑138 (MQ=255)                                                                                                                 aGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGAtt                                                <  1:93433/138‑1 (MQ=255)                                                                                                                  ggCAACACAGGGAATGGCACCGGCTTCGCCGGTTGTCTCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTgg                                                                       <  1:690763/114‑1 (MQ=255)                                                                                                                  ggCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTgg                                                                       >  2:690763/1‑114 (MQ=255)                                                                                                                   gCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCAc                                  >  1:1617651/1‑150 (MQ=255)                                                                                                                     aaCACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCTCGCCCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCa                                <  1:998598/150‑1 (MQ=255)                                                                                                                     aaCACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCaa                                           <  1:1111564/139‑1 (MQ=255)                                                                                                                     aaCACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCaa                                           >  2:1111564/1‑139 (MQ=255)                                                                                                                       cacaGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTc                                                                                                  <  1:1009608/82‑1 (MQ=255)                                                                                                                       cacaGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTc                                                                                                  >  2:1009608/1‑82 (MQ=255)                                                                                                                        acaGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCActgc                                                                                             <  2:1158421/86‑1 (MQ=255)                                                                                                                        acaGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCActgc                                                                                             >  1:1158421/1‑86 (MQ=255)                                                                                                                         caGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGaa                            <  1:152218/150‑1 (MQ=255)                                                                                                                            ggAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGCAGCGGATTGCCAACAGGCGCACCCGGCAgcc                         >  2:661491/1‑150 (MQ=255)                                                                                                                            ccgcgaacaccggcgaagccggtgTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTgcg                                                                                                                 >  1:1562246‑M2/25‑62 (MQ=255)                                                                                                                            ccgcgaacaccggcgaagccggtgTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTgcg                                                                                                                 <  2:1562246‑M2/38‑1 (MQ=255)                                                                                                                            ccgcgaacaccggcgaagccggtgTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTgg                                                                                          >  1:1575935‑M2/25‑85 (MQ=255)                                                                                                                            ccgcgaacaccggcgaagccggtgTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTgg                                                                                          <  2:1575935‑M2/61‑1 (MQ=255)                                                                                                                            ccgcgaacaccggcgaagccggtgCTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCa                                                             <  1:435590‑M2/90‑1 (MQ=255)                                                                                                                            ccgcgaacaccggcgaagccggtgCTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCa                                                             >  2:435590‑M2/25‑114 (MQ=255)                                                                                                                                tGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCa                     >  1:1391410/1‑150 (MQ=255)                                                                                                                                     ccGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAg                                                                                 >  2:1304445/1‑85 (MQ=255)                                                                                                                                     ccGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAg                                                                                 <  1:1304445/85‑1 (MQ=255)                                                                                                                                     ccGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAg                >  1:1182655/1‑150 (MQ=255)                                                                                                                                          ttCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCActgctg                                                                                           <  2:1345085/70‑1 (MQ=255)                                                                                                                                          ttCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCActgctg                                                                                           >  1:1345085/1‑70 (MQ=255)                                                                                                                                          ttCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGa           <  2:559600/150‑1 (MQ=255)                                                                                                                                           tCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAg          <  2:1391410/150‑1 (MQ=255)                                                                                                                                                   gTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTATTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCg  >  1:271793‑M2/2‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                     ATCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGCGCCCGCGAAGCAGGCAACACAGGGAATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACATGGGCCATGTTGCGCTTGTAAATTGCGTCACTGCTGGTCGTTGTAGTGGAACTTGGGCATTTCCCAGTGGAAGCGGATTGCCAACAGGCGCACCAGGAAGCCGCCAAACAGTGTGAGCAACATCG  >  NC_002947/5571372‑5571667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.