New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 940447	75 (1.250)	4 (0.070)	4/238	NT	6.5%	coding (5178/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 944273	41 (0.690)					coding (1352/18933 nt)	PP_0806	surface adhesion protein

TCGTACTCGGTAGCCACTGAAGCATTACCGCTTGGGTCGGTCTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGAATTGCAATGGGGCAGAGCTGTTG  >  NC_002947/944141‑944422                                                                                                                                     |                                                                                                                                                      tCGTACTCGGTAGCCACTGAAGCATTACCGCTTGGGTCGGTCTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATcg                                                                                                                                      >  1:327828/1‑150 (MQ=255)           tAGCCACTGAAGCATTACCGCTTGGGTCGGTCTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGa                                                                                                                            <  1:879158/150‑1 (MQ=255)              ccACTGAAGCATTACCGCTTGGGTCGGTCTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAg                                                                                                                         >  1:1389537/1‑150 (MQ=255)                         ttgccgctTGGGTCGGTCTGCACCAGGGTCAACTGCTCGCCCGGCTGCGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCTCCCACAACACCCGTGCCGATCAcggcgccactgttgaggtgcgcgatgccagtggcaccgt                                                                                                                >  1:874587‑M2/4‑109 (MQ=255)                         ttGCCGCTTGGGTCGGTCTGCACCAGGGTCAACTGCTCGCCCGGCTGCGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCTCCCACAACACCCGTGCCGATCAcggcgccactgttgaggtgcgcgatgccagtggcaccgt                                                                                                                <  2:874587‑M2/148‑40 (MQ=255)                          tACCGCTTGGGTCGGTCTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCt                                                                                                             >  1:216510/1‑150 (MQ=255)                          tACCGCTTGGGTCGGTCTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCt                                                                                                             <  2:216510/150‑1 (MQ=255)                                     tcggtcTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCg                                                                                                  >  1:870195/1‑150 (MQ=255)                                        gtcTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTc                                                                                               >  1:1063046/1‑150 (MQ=255)                                         tcTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCa                                                                                              >  2:346195/1‑150 (MQ=255)                                         tcTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCa                                                                                              >  1:1377240/1‑150 (MQ=255)                                         tcTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCa                                                                                              >  2:394768/1‑150 (MQ=255)                                                cAGGGTCAACTGCTCGCCCGGCTGCGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCTCCCACAACACCCGTGCCGATCAcggcgccactgttgaggtgcgcgatgccagtggcaccgtgatcggcacgggtgttgtg                                                                                             <  2:1359512‑M2/144‑59 (MQ=255)                                                cAGGGTCAACTGCTCGCCCGGCTGCGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCTCCCACAACACCCGTGCCGATCAcggcgccactgttgaggtgcgcgatgccagtggcaccgtgatcggcacgggtgttgtg                                                                                             >  1:1359512‑M2/1‑86 (MQ=255)                                                cAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAg                                                                                       <  2:299684/150‑1 (MQ=255)                                                cAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAg                                                                                       <  2:1063046/150‑1 (MQ=255)                                                cAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAg                                                                                       >  2:159098/1‑150 (MQ=255)                                                   gCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGcc                                                                                    <  2:1389537/150‑1 (MQ=255)                                                     tCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGt                                                                                  >  1:68086/1‑150 (MQ=255)                                                       aaCTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCa                                                                                >  2:333680/1‑150 (MQ=255)                                                       aaCTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCa                                                                                >  1:719139/1‑150 (MQ=255)                                                         cTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGc                                                                              >  1:296110/1‑150 (MQ=255)                                                                    gCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCa                                                                                              >  1:1375037/1‑123 (MQ=255)                                                                    gCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCa                                                                                              <  2:1375037/123‑1 (MQ=255)                                                                         cacagccgggCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTg                                                              <  2:320494/143‑1 (MQ=255)                                                                          cGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGAGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATAtttg                                                             >  2:1212998/1‑148 (MQ=255)                                                                              tGGGGCGAGGTCTATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTAc                                                         <  2:327828/150‑1 (MQ=255)                                                                                gggCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCAGGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTg                                                       >  2:539432/1‑150 (MQ=255)                                                                                        tCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCa                                                                                                                                         >  1:1207431/1‑60 (MQ=255)                                                                                        tCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCa                                                                                                                                         <  2:1207431/60‑1 (MQ=255)                                                                                          gATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCgg                                             >  1:942948/1‑150 (MQ=255)                                                                                             cAGGAAGGTGCCGGTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGCCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGgtgt                                          <  2:649507/150‑1 (MQ=255)                                                                                              aGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGtgtg                                         >  1:656462/1‑150 (MQ=255)                                                                                                gAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGAt                                       <  2:1062615/150‑1 (MQ=255)                                                                                                      gCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCgg                                 >  1:195449/1‑150 (MQ=255)                                                                                                       ccGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGgc                                <  1:333680/150‑1 (MQ=255)                                                                                                        cGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAatat                                                                <  1:27178/117‑1 (MQ=255)                                                                                                        cGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAatat                                                                >  2:27178/1‑117 (MQ=255)                                                                                                            ggCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATc                           <  2:870195/150‑1 (MQ=255)                                                                                                             gCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCg                          >  2:1338918/1‑150 (MQ=255)                                                                                                               acacACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACTGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGaa                        >  2:708786/4‑150 (MQ=255)                                                                                                               aCCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGaa                        >  2:1563959/1‑150 (MQ=255)                                                                                                                      acacCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGAATTGCAAt                 <  1:159098/150‑1 (MQ=255)                                                                                                                          ccGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGAATTGCAATgggg             >  1:461814/1‑150 (MQ=255)                                                                                                                              gCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGCAGCCTAGAGCGGCAATTGGGCaga         <  2:68086/150‑1 (MQ=37)                                                                                                                                   tCACAGTGCCATTGGCATCGCGCACTTCGCCAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGAATTGCAATGGGGCAGAGCTGt    >  2:770791/1‑150 (MQ=255)                                                                                                                                     acaGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGAATTGCAATGGGGCAGAGCTGTTg  <  1:708786/150‑1 (MQ=255)                                                                                                                                     |                                                                                                                                                      TCGTACTCGGTAGCCACTGAAGCATTACCGCTTGGGTCGGTCTGCACCAGGCTCAACTGCTCGCCCGGCTGTGCGGCTGGGGCGAGGTCGATCAGGAAGGTGCCGTTGGCACCCACGACACCCGTGCCGATCACAGTGCCATTGGCATCGCGCACTTCGACAGTGGCACCTGGCTCGCCGCGACCGCTCAGGGCCAGGCCGTCAGCACCAACTGTAATATTGGTTACTGCGTCAGGCGGTGTGATGTCCGGCGCATCGAATTGCAATGGGGCAGAGCTGTTG  >  NC_002947/944141‑944422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.