New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 114994564 (1.070)4 (0.070) 4/224 NT 6.4% intergenic (‑186/+71) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 = 2354586 58 (1.040)intergenic (‑12/+46) PP_2068/PP_2069 multidrug MFS transporter membrane fusion protein/multidrug MFS transporter outer membrane protein

ATGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGTTGGCCCGCAGGCTGATCATTTC  >  NC_002947/2354441‑2354727
                                                                                                                                                 |                                                                                                                                             
aTGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCttcg                                                                                                                                           <  1:1049261‑M2/150‑5 (MQ=255)
aTGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCCGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCttcg                                                                                                                                           >  1:189278‑M2/1‑146 (MQ=255)
      ggttTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTa                                                                                                                                     <  1:1346507/150‑1 (MQ=255)
             aaTCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTggg                                                                                                                              >  2:1307108/1‑150 (MQ=255)
               tctcGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCg                                                                                                                            >  1:245080/1‑150 (MQ=255)
                ctcGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCgg                                                                                                                           >  1:833613/1‑150 (MQ=255)
                 tcGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCttcgcgg                                                                                                                                        >  2:552034‑M2/1‑129 (MQ=255)
                 tcGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCttcgcgg                                                                                                                                        <  1:552034‑M2/136‑8 (MQ=255)
                 tcGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGt                                                                                                                          >  2:634856/1‑150 (MQ=255)
                      tttggCTTGCGGGCTGTCGGTGGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCg                                                                                                                     <  2:997872/147‑1 (MQ=255)
                           ccTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCgctgct                                                                                                                >  2:673679/1‑150 (MQ=255)
                            ctgctgGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGctgctg                                                                                                               <  2:245080/150‑1 (MQ=255)
                              gctggctgTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTCGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGt                                                                                                             <  1:1090055/150‑1 (MQ=255)
                                  gctgTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTg                                                                                                         <  1:673679/150‑1 (MQ=255)
                                    tgTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGcc                                                                                                       >  2:1066820/1‑150 (MQ=255)
                                      tCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCctc                                                                                                     >  2:529200/1‑150 (MQ=255)
                                             tgGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCtt                                                                                                          >  2:1610403/1‑138 (MQ=255)
                                             tgGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCtt                                                                                                          <  1:1610403/138‑1 (MQ=255)
                                             tgGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTac                                                                                              >  1:535331/1‑150 (MQ=255)
                                             tgGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTac                                                                                              <  1:1579168/150‑1 (MQ=255)
                                              gggAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTacc                                                                                             >  1:1538548/1‑150 (MQ=255)
                                                gAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTaccac                                                                                           >  2:1431468/1‑150 (MQ=255)
                                                   ccACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCAccgc                                                                                        >  2:1576799/1‑150 (MQ=255)
                                                     aCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCAccgccc                                                                                      >  2:1558921/1‑150 (MQ=255)
                                                        gTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGc                                                                                                        <  1:971072/129‑1 (MQ=255)
                                                        gTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGc                                                                                                        >  2:971072/1‑129 (MQ=255)
                                                              cTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCgctg                                                                                                                  <  1:487618/113‑1 (MQ=255)
                                                              cTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCgctg                                                                                                                  >  2:487618/1‑113 (MQ=255)
                                                              cTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTGCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAgcgc                                                                             <  1:275942/150‑1 (MQ=255)
                                                               tCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAgcgcg                                                                            >  2:1349349/1‑150 (MQ=255)
                                                                        aaaaGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAgg                                                                   >  1:883504/1‑150 (MQ=255)
                                                                        aaaaGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAgg                                                                   >  1:131915/1‑150 (MQ=255)
                                                                         aaaGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGt                                                                  <  1:1431468/150‑1 (MQ=255)
                                                                             cTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTCCAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTAc                                                              <  1:1349349/150‑1 (MQ=255)
                                                                              tGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTAcc                                                             >  1:1370704/1‑150 (MQ=255)
                                                                                 cgcgTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTgc                                                          <  2:131915/150‑1 (MQ=255)
                                                                                               ggCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGgcg                                            <  2:883504/150‑1 (MQ=255)
                                                                                                 cTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGcc                                          <  2:833613/150‑1 (MQ=255)
                                                                                                  ttGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCt                                                            <  2:2683/131‑1 (MQ=255)
                                                                                                  ttGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCt                                                            >  1:2683/1‑131 (MQ=255)
                                                                                                   tGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCttcgcgggcaaggccgctcccacacgggtcgcgtcagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaatctt                                        <  1:1366333‑M2/150‑104 (MQ=255)
                                                                                                    gCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTc                                       <  1:1576799/150‑1 (MQ=255)
                                                                                                      ccGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCgg                                     >  1:1150277/1‑150 (MQ=255)
                                                                                                      ccGCGAACACGGGCGAAGCCCGTGCCATCCACCACGGTGTTGGCttcgcgggcaagcccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggcatccagtgactacaatctttac                                     <  1:1491928‑M2/150‑107 (MQ=255)
                                                                                                        gcgAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGc                                   >  1:960482/1‑150 (MQ=255)
                                                                                                        gcgAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGc                                   <  2:1150277/150‑1 (MQ=255)
                                                                                                            acacGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCt                               <  1:412843/150‑1 (MQ=255)
                                                                                                               cGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCtgtg                            <  2:960482/150‑1 (MQ=255)
                                                                                                               cGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCtgtg                            <  2:1370704/150‑1 (MQ=255)
                                                                                                                ggggGAAGTCCGTGCCATCCACCGGGGTGTATTCTTCGCGGGTACCGTGGGCGGTGCGCGCTGCTGGTCTTGCCTGTCGTTACTACCGACCGCCCACCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCCGGCTTCtctgt                           >  2:222998/1‑150 (MQ=255)
                                                                                                                gggCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCg                                                                                                  >  2:467325/1‑79 (MQ=255)
                                                                                                                gggCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCg                                                                                                  <  1:467325/79‑1 (MQ=255)
                                                                                                                gggCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCtgtgt                           >  2:1505687/1‑150 (MQ=255)
                                                                                                                gggCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCAATTCCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCtgtgt                           <  1:529200/150‑1 (MQ=255)
                                                                                                                                aTCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGTTGGCCCGCAGGCt           >  1:1341027/1‑150 (MQ=255)
                                                                                                                                aTCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGATGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGTTGGCCCGCAGGCt           >  1:1328321/1‑150 (MQ=255)
                                                                                                                                aTCCACCACGGTGTTGGCttcgcgggcaaggccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggc                                                           <  2:827000‑M2/102‑85 (MQ=255)
                                                                                                                                aTCCACCACGGTGTTGGCttcgcgggcaaggccgctcccccagggatcgcgccagcttttagaaattgagcaagacagttgctcccaaaaaaagcaaacggc                                                           >  1:827000‑M2/1‑18 (MQ=255)
                                                                                                                                   cACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCa                                                                                 >  2:1176484/1‑77 (MQ=255)
                                                                                                                                   cACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCa                                                                                 <  1:1176484/77‑1 (MQ=255)
                                                                                                                                     ccGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTg                                                     <  2:149501/103‑1 (MQ=255)
                                                                                                                                     ccGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTg                                                     >  1:149501/1‑103 (MQ=255)
                                                                                                                                      cgcgGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGtt                       <  2:1573581/132‑1 (MQ=255)
                                                                                                                                      cgcgGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGtt                       >  1:1573581/1‑132 (MQ=255)
                                                                                                                                         ggTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGTTGGCCCGCAGGCTGATCATTTc  <  1:634856/150‑1 (MQ=255)
                                                                                                                                         ggTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGTTGGCCCGCAGGCTGATCATTTc  <  1:1505687/150‑1 (MQ=255)
                                                                                                                                         ggTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGTTGGCCCGCAGGCTGATCATTTc  <  1:1066820/150‑1 (MQ=255)
                                                                                                                                             tATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCt                               <  2:1238831/117‑1 (MQ=255)
                                                                                                                                             tATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCt                               >  1:1238831/1‑117 (MQ=255)
                                                                                                                                              aTTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAgcgcgc                                                                           >  2:1542194/1‑72 (MQ=255)
                                                                                                                                              aTTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAgcgcgc                                                                           <  1:1542194/72‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                             
ATGGTTGGTTTCCAATCTCGAATTGGGCCTGCTGGCTGTCGGTTGTGGGAGCCACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTATTCTTCGCGGGTACAGTGGGCGGTGCTCGCTGCTGGTCTTGCCTCTCGCTACCACCGCCCGCCCAGCGCGCGGAACAGGTTTACCTGCGCTTGCGCCAGGCGCCCTCGGGCTTCTGTGTGGTTGGCCCGCAGGCTGATCATTTC  >  NC_002947/2354441‑2354727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.