New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2780570 = | 41 (0.680) | 4 (0.070) | 4/232 | NT | 9.1% | coding (301/480 nt) | PP_2433 | hypothetical protein |
? | NC_002947 | 2780615 = | 40 (0.690) | coding (346/480 nt) | PP_2433 | hypothetical protein |
GTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTTGTGGC > NC_002947/2780471‑2780758 | gTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGcc > 1:1437062/1‑150 (MQ=255) aCCAGATCATCCCGCTGCGGACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCCCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGc < 1:542088/150‑1 (MQ=255) aGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCttt < 2:556163/150‑1 (MQ=255) catcCCGCTGCGCACCCTCAAATCCCGNATCGAGCGTGACNAACCACNGNCCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTCCCTTTCCaa > 1:846956/1‑150 (MQ=255) cccGCTGCGCACCCTCAAATCCCGTCTAAGGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGcc > 1:863518/1‑150 (MQ=255) tgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTgg > 2:876805‑M1/75‑134 (MQ=255) tgggtggtgagcatctgcatcggcgtcagccccgagaagcgttccttgggcttggaaagccagcgtttggccttGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTgg < 1:876805‑M1/60‑1 (MQ=255) aCCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGc < 1:1028292/150‑1 (MQ=255) tCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTtct > 2:199475/1‑150 (MQ=255) cAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTtctc < 2:1528156/150‑1 (MQ=255) ccccGTATCGAGCGTGACCACACGCTGACCGTGGATGAGAGCTATCGCCTTTTCCGGTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgccg < 2:1414758/149‑4 (MQ=255) gTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGc > 2:27462/1‑126 (MQ=255) gTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGc < 1:27462/126‑1 (MQ=255) gACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAg > 1:1579618/1‑150 (MQ=255) aCCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGa > 1:1316623/1‑150 (MQ=255) ccAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGGTGACGCCGATGCAGAt < 1:1327594/150‑1 (MQ=255) aCCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCt < 2:1437062/150‑1 (MQ=255) tGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCttt > 1:1022124/1‑99 (MQ=255) tGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCttt < 2:1022124/99‑1 (MQ=255) cGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGcaccac > 1:665641/1‑150 (MQ=255) cGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGcaccac > 1:665642/1‑150 (MQ=255) tCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCa > 2:120649/1‑150 (MQ=255) ccagcgtttggccttgcccgcttcaccgaacacggcctcggccatggcggtgatgtgggcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCa < 1:876805‑M2/74‑1 (MQ=255) ccagcgtttggccttgcccgcttcaccgaacacggcctcggccatggcggtgatgtgggcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCa > 2:876805‑M2/61‑134 (MQ=255) gTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgggg < 2:1141058/100‑1 (MQ=255) gTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgggg > 1:1141058/1‑100 (MQ=255) ttCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCgaa < 1:166802/150‑1 (MQ=255) ggCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGc < 2:537195/92‑1 (MQ=255) ggCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGc > 1:537195/1‑92 (MQ=255) ggCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgct < 2:1564623/150‑1 (MQ=255) GCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgctg < 1:290090‑M1/150‑1 (MQ=255) ccgcttcaccgaacacggcctcggccatggcggtgatgtgggcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTtctc < 1:1211185‑M2/41‑1 (MQ=255) ccgcttcaccgaacacggcctcggccatggcggtgatgtgggcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTtctc > 2:1211185‑M2/44‑84 (MQ=255) CCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgggg < 1:1365474‑M1/88‑1 (MQ=255) CCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCgggg > 2:1365474‑M1/1‑88 (MQ=255) CCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCATGTCGAAGAAAtgctgct < 2:1197839‑M1/150‑1 (MQ=255) CACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGGCCGGCCAAAGGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgctgctg < 1:693602‑M1/150‑1 (MQ=255) CACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgctgctg < 1:278990‑M1/150‑1 (MQ=255) CACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgctgctg < 2:1554512‑M1/150‑1 (MQ=255) tCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCaa < 1:1546223/67‑1 (MQ=255) tCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCaa > 2:1546223/1‑67 (MQ=255) cACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGaaa > 2:203552/1‑137 (MQ=255) cACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGaaa < 1:203552/137‑1 (MQ=255) aCCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgctg > 2:202324/1‑141 (MQ=255) aCCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAAtgctg < 1:202324/141‑1 (MQ=255) aCCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGAtt < 2:863518/150‑1 (MQ=255) ccGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTg > 2:1106199/1‑150 (MQ=255) ccATGGCCGAGGCCGTGTTCGGTGGAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGc > 1:569406/1‑84 (MQ=255) ccATGGCCGAGGCCGTGTTCGGTGGAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGc < 2:569406/84‑1 (MQ=255) ccATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCg > 2:1229204/1‑150 (MQ=255) aGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATg < 2:278990/150‑1 (MQ=255) ttCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCGTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGa > 2:61824/1‑150 (MQ=255) tGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGCTGCACACCACCCAGCAAGGCCCCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTtg < 1:199475/150‑1 (MQ=255) gAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTtgt > 1:546326/1‑150 (MQ=255) aGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTTGTgg > 1:730370/1‑150 (MQ=255) gCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTTGTGGc > 1:589113/1‑150 (MQ=255) gcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTtgt < 2:123762‑M2/141‑1 (MQ=255) gcAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTtgt > 1:123762‑M2/3‑143 (MQ=255) | GTGGAGCGCGACCAGATCATCCCGCTGCGCACCCTCAAATCCCGTATCGAGCGTGACCAACCGCTGACCGTGGATGAGAGCGATCGGCTGTTCCGCTCGGCCCACATCACCGCCATGGCCGAGGCCGTGTTCGGTGAAGCGGGCAAGGCCAAACGCTGGCTTTCCAAGCCCAAGGAACGCTTCTCGGGGCTGACGCCGATGCAGATGCTCACCACCCAGCAAGGCACCACGCAGGTCGAAGAAATGCTGCTGCAGATTGCCGAGGGCTATGGCCTGTGATTTTGTGGC > NC_002947/2780471‑2780758 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |