New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3478034 =	52 (0.870)	5 (0.080)	5/240	NT	7.8%	intergenic (‑26/+70)	PP_3088/PP_3089	hypothetical protein/hypothetical protein
	?	NC_002947	3478063 =	66 (1.100)					intergenic (‑55/+41)	PP_3088/PP_3089	hypothetical protein/hypothetical protein

AACAAGGCAGAGAAGCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCGGGCA  >  NC_002947/3477917‑3478209                                                                                                                                                   |                                                                                                                                                   aaCAAGGCAGAGAAGCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGaa                                                                                                                                                 >  1:681200/1‑150 (MQ=255)    aaGGCAGAGAAGCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAgcac                                                                                                                                              >  2:89889/1‑150 (MQ=255)     aGGCAGAGAAGCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCAGGAAAACCCGGCGCGCTGCGGAAcaca                                                                                                                                             <  2:640794/150‑1 (MQ=255)       gCAGAGAAGCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGAACAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACggg                                                                                                                                           >  1:402526/1‑150 (MQ=255)        cAGAGAAGCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGCGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGgc                                                                                                                                          >  2:9142/1‑150 (MQ=255)               gCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGaa                                                                                                                                   <  1:703899/150‑1 (MQ=255)                   aaGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCgg                                                                                                                               <  1:1635409/150‑1 (MQ=255)                      tCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGccc                                                                                                                            >  2:1316495/1‑150 (MQ=255)                           gCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGt                                                                                                                       >  1:724522/1‑150 (MQ=255)                            ccACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGtt                                                                                                                      >  1:554415/1‑150 (MQ=255)                             cACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTc                                                                                                                     <  1:1195569/150‑1 (MQ=255)                              aCTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCg                                                                                                                    >  1:1085687/1‑150 (MQ=255)                                   cACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACg                                                                                                               >  1:1037146/1‑150 (MQ=255)                                   cACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACg                                                                                                               >  2:739458/1‑150 (MQ=255)                                    aCCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCCGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGt                                                                                                              <  2:681200/150‑1 (MQ=255)                                         cggtAGGGGCGACCAGTGTGGCCACCGAGAGGGCATTGAGAATTTCAGGCATAGAACACTGTGGACAGGGCTAGTGAACAGCGCGCAGCAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTa                                                                                                         <  1:275751/147‑1 (MQ=255)                                                ggCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAac                                                                                                  >  2:446518/1‑150 (MQ=255)                                                    aCCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACtt                                                                                              >  1:1022941/1‑150 (MQ=255)                                                     ccAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACttt                                                                                             <  1:330454/150‑1 (MQ=255)                                                        gtgtGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGtt                                                                                          >  2:1051661/1‑150 (MQ=255)                                                            ggCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTcgcg                                                                                      >  1:1180023/1‑150 (MQ=255)                                                            ggCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTcgcg                                                                                      <  2:747935/150‑1 (MQ=255)                                                             gCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCgcgg                                                                                     <  2:334763/150‑1 (MQ=255)                                                              aaagtgtttgcctaagcacgtaccgaaccatgggccgcttcggcggcctgtgttccACAGCGCGCCGGAAAACCCGGCGCGCTGCGGaa                                                                                                                                                 <  2:1314062‑M1/33‑1 (MQ=255)                                                              aaagtgtttgcctaagcacgtaccgaaccatgggccgcttcggcggcctgtgttccACAGCGCGCCGGAAAACCCGGCGCGCTGCGGaa                                                                                                                                                 >  1:1314062‑M1/57‑89 (MQ=255)                                                                   gtttgcctaagcacgtaccgaaccatgggccgcttcggcggcctgtgttccACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAg                                                                                                                                            <  2:493777‑M1/38‑1 (MQ=255)                                                                   gtttgcctaagcacgtaccgaaccatgggccgcttcggcggcctgtgttccACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAg                                                                                                                                            >  1:493777‑M1/52‑89 (MQ=255)                                                                       ggTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCa                                                                           <  2:1022941/150‑1 (MQ=255)                                                                        gTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAg                                                                          >  2:1103417/1‑150 (MQ=255)                                                                            ttGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTa                                                                                                         <  1:635953/115‑1 (MQ=255)                                                                            ttGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTa                                                                                                         >  2:635953/1‑115 (MQ=255)                                                                            ttGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGccac                                                                      <  1:739458/150‑1 (MQ=255)                                                                                   tttCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGAt                                                               >  1:408549/1‑150 (MQ=255)                                                                                      cAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGtt                                                            <  1:446518/150‑1 (MQ=255)                                                                                           aTAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTgccgc                                                       >  2:348525/1‑150 (MQ=255)                                                                                               aaCACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTcgcg                                                                                      >  2:1382831/1‑115 (MQ=255)                                                                                               aaCACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTcgcg                                                                                      <  1:1382831/115‑1 (MQ=255)                                                                                               aaCACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAg                                                                          <  2:206133/127‑1 (MQ=255)                                                                                               aaCACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAg                                                                          >  1:206133/1‑127 (MQ=255)                                                                                               aaCACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGc                                                   >  1:975984/1‑150 (MQ=255)                                                                                               aaCACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGATCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGc                                                   >  2:716120/1‑150 (MQ=255)                                                                                                    tctGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGc                                              >  2:963886/1‑150 (MQ=255)                                                                                                    tctGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGc                                              >  2:1527677/1‑150 (MQ=255)                                                                                                           aTGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCg                                         >  2:1173945/1‑148 (MQ=255)                                                                                                           aTGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCg                                         <  1:1173945/148‑1 (MQ=255)                                                                                                             ggCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCAGGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGc                                     >  1:1398170/1‑150 (MQ=255)                                                                                                             ctgtgttccgcagcgcgccgggttttccggcgcgctgtGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAac                                                                                                  <  2:493777‑M2/51‑1 (MQ=255)                                                                                                             ctgtgttccgcagcgcgccgggttttccggcgcgctgtGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAac                                                                                                  >  1:493777‑M2/39‑89 (MQ=255)                                                                                                                tAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTc                                                                                                                     <  1:341062/67‑1 (MQ=255)                                                                                                                tAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTc                                                                                                                     >  2:341062/1‑67 (MQ=255)                                                                                                                tAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGt                                  >  1:312468/1‑150 (MQ=255)                                                                                                                  ttccgcagcgcgccgggttttccggcgcgctgtGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACttt                                                                                             >  1:1314062‑M2/34‑89 (MQ=255)                                                                                                                  ttccgcagcgcgccgggttttccggcgcgctgtGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACttt                                                                                             <  2:1314062‑M2/56‑1 (MQ=255)                                                                                                                   ggAAGAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACATAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTct                               <  2:303088/149‑1 (MQ=255)                                                                                                                        aGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTgg                          <  2:1180023/150‑1 (MQ=255)                                                                                                                         gcgcgcCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTctcctgcg                         <  2:408549/150‑3 (MQ=255)                                                                                                                          cgcgccgggttttccggcgcgctgcGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGgt                        >  2:72763‑M2/26‑150 (MQ=255)                                                                                                                           gcgcCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGt                                       >  1:23020/1‑134 (MQ=255)                                                                                                                           gcgcCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGgtg                       >  2:1380581/1‑150 (MQ=255)                                                                                                                           gcgcCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTAGGt                                       <  2:23020/134‑1 (MQ=255)                                                                                                                              ccGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAg                    <  2:453258/150‑1 (MQ=255)                                                                                                                                   aaaCCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGgt                        <  1:433830/141‑1 (MQ=255)                                                                                                                                   aaaCCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGgt                        >  2:433830/1‑141 (MQ=255)                                                                                                                                      cccGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCtt            >  2:319844/1‑150 (MQ=255)                                                                                                                                       ccGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGa                                                                >  1:480764/1‑97 (MQ=255)                                                                                                                                       ccGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGa                                                                <  2:480764/97‑1 (MQ=255)                                                                                                                                       ccGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACGTTGATCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTg           >  2:395646/1‑150 (MQ=255)                                                                                                                                        cGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTGTAGCAGCTGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGa          <  1:1103417/150‑1 (MQ=255)                                                                                                                                         ggCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGAt         <  1:1380581/150‑1 (MQ=255)                                                                                                                                         ggCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGAt         <  1:1316495/150‑1 (MQ=255)                                                                                                                                          gcgcgcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATg        >  1:397581/1‑150 (MQ=255)                                                                                                                                           cgcgcTGCGGAACACTGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGc       <  2:402526/150‑1 (MQ=255)                                                                                                                                             cgcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCgg     <  2:397581/150‑1 (MQ=255)                                                                                                                                             cgcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCgg     <  1:319844/150‑1 (MQ=255)                                                                                                                                             cgcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCgg     <  2:312468/150‑1 (MQ=255)                                                                                                                                             cgcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCgg     <  1:963886/150‑1 (MQ=255)                                                                                                                                              gcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGAt                                                               >  2:1131654/1‑91 (MQ=255)                                                                                                                                              gcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGAt                                                               <  1:1131654/91‑1 (MQ=255)                                                                                                                                              gcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCgg     <  2:325054/149‑1 (MQ=255)                                                                                                                                              gcTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCgg     >  1:325054/1‑149 (MQ=255)                                                                                                                                                tGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCGGGCa  >  1:844205/1‑150 (MQ=255)                                                                                                                                                   ggAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCg                                    >  1:995642/1‑113 (MQ=255)                                                                                                                                                   ggAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCg                                    <  2:995642/113‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                   AACAAGGCAGAGAAGCTCAAGTCTTCGCCACTGCCACCCTCGATAGGGGCGACCAGTGTGGCCAGCGAGAGGTCATTGAGAATTTCAGGCATAGAACACTCTGGACATGGCTAGTGAACAGCGCGCCGGAAAACCCGGCGCGCTGCGGAACACAGGCCGCCGAAGCGGCCCATGGTTCGGTACGTGCTTAGGCAAACACTTTGTTCGCGGTGCGGTCCCAGCCACCCACGATGTTGCCGCCGGCCTGGCCGTCGGTGCGGTTCTGCTGGGTGTAGGTGGTCTTGATGCGGGCA  >  NC_002947/3477917‑3478209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.