New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6179890	56 (0.940)	6 (0.110)	6/228	NT	10.1%	coding (285/471 nt)	atpF	ATP synthase subunit b
	?	NC_002947	= 6179909	54 (0.950)					coding (266/471 nt)	atpF	ATP synthase subunit b

GGCGCCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCAGGTCGCGAGCTGCGCGGTTGGCAGCGTCCAAGCCGTCGGCAAT  >  NC_002947/6179761‑6180057                                                                                                                                                        |                                                                                                                                                     ggCGCCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑Tc                                                                                                                                                     >  2:1493418‑M2/1‑149 (MQ=255)    gcCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑Tcgtc                                                                                                                                                  <  1:855378‑M2/150‑5 (MQ=255)       aaGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTTTTTGTCGATCTAGGCCCCAGCGTTTTCAGGCCCACAGCCATCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGAc                                                                                                                                               >  1:1185789/1‑150 (MQ=255)                         accaACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGA‑AGCCCGTGAACAGGCT‑Cgcgtcgaagctgaccgtgtgaaggct                                                                                                                            >  2:1146283‑M2/1‑124 (MQ=255)                           caACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCt                                                                                                                           >  1:1564466/1‑150 (MQ=255)                           caACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCt                                                                                                                           >  2:1366944/1‑150 (MQ=255)                           caACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCGGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCt                                                                                                                           <  1:656054/150‑1 (MQ=255)                             aCGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGGGCCTGAGCCTTCACACTGTCAGCTT‑‑CGACGCGGGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCttg                                                                                                                         <  1:254756/150‑1 (MQ=255)                              cGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTTGTCGACGA‑AGCCCGTGAACAGGCTCGcgtcgaagctgaccgtgtgaaggctcag                                                                                                                          >  1:200464‑M2/1‑122 (MQ=255)                                gCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCttgctt                                                                                                                      >  1:812090/1‑150 (MQ=255)                                 ccAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCttgcttt                                                                                                                     >  1:511570/1‑150 (MQ=255)                                       cACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTAGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCga                                                                                                               <  2:1185789/150‑1 (MQ=255)                                        aCCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCgat                                                                                                              >  2:1451749/1‑150 (MQ=255)                                        aCCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCgat                                                                                                              <  1:405043/150‑1 (MQ=255)                                         cccACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCgatg                                                                                                             >  2:1336263/1‑150 (MQ=255)                                          ccACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCgatga                                                                                                            >  1:1618107/1‑150 (MQ=255)                                              ttGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTc                                                                                                        <  2:855378/150‑1 (MQ=255)                                               tGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTAAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTCCTCGATGATTTCg                                                                                                       >  2:88759/1‑150 (MQ=255)                                                     cGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCCGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGgctgct                                                                                                 <  1:1336263/150‑1 (MQ=255)                                                      gCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTTGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGc                                                                                                                                           <  2:1012944/107‑1 (MQ=255)                                                      gCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTTGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTAACGGGCT‑TCGTCGACAAGc                                                                                                                                           >  1:1012944/1‑107 (MQ=255)                                                       cAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCttgct                                                                                                                       >  2:501659/1‑126 (MQ=255)                                                       cAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCttgct                                                                                                                       <  1:501659/126‑1 (MQ=255)                                                          ggCGTCTTTAGCGCTGTTCAGTCCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGc                                                                                            <  1:180404/150‑1 (MQ=255)                                                              tCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTa                                                                                        <  1:1272678/150‑1 (MQ=255)                                                               cTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGTAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAg                                                                                       <  2:511570/150‑1 (MQ=255)                                                                    gcgcTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCa                                                                                  <  2:555332/150‑1 (MQ=255)                                                                    gcgcTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCa                                                                                  >  1:1598491/1‑150 (MQ=255)                                                                    gcgcTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCa                                                                                  >  1:1482608/1‑150 (MQ=255)                                                                      gcTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACg                                                                                <  2:1618107/150‑1 (MQ=255)                                                                       cTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCAc                                                                                 >  2:448475/1‑148 (MQ=255)                                                                       cTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCAc                                                                                 >  2:448019/1‑148 (MQ=255)                                                                       cTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCAc                                                                                 <  1:448019/148‑1 (MQ=255)                                                                       cTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCAc                                                                                 <  1:448475/148‑1 (MQ=255)                                                                        tGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCa                                                                              >  1:1544951/1‑150 (MQ=255)                                                                        tGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCa                                                                              >  1:962365/1‑150 (MQ=255)                                                                          ttCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGc                                                                                                                                           <  1:1515385/87‑1 (MQ=255)                                                                          ttCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGc                                                                                                                                           >  2:1515385/1‑87 (MQ=255)                                                                          ttCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATTATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGt                                                                            <  1:543354/150‑1 (MQ=255)                                                                              gTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCt                                                                        >  1:210679/1‑150 (MQ=255)                                                                                 ccTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGAc                                                                     <  1:1451749/150‑1 (MQ=255)                                                                                  cTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCttgc                                                                                                                        <  1:741436/98‑1 (MQ=255)                                                                                  cTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCttgc                                                                                                                        >  2:741436/1‑98 (MQ=255)                                                                                   tGTTCGATCTCGGTCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGa                                                                      <  1:1393640/147‑1 (MQ=255)                                                                                   tGTTCGATCTCGGTCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGa                                                                      >  2:1393640/1‑147 (MQ=255)                                                                                     ttCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTATTCACGGGCT‑ACGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGGTGATTTGAGTTGCTTGTGATTTAGCTTCACGCAGTTGCTGACCCGc                                                                 >  1:499038/1‑150 (MQ=255)                                                                                        gATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCttt                                                              >  1:925265/1‑150 (MQ=255)                                                                                         aTCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTtc                                                             >  2:103634/1‑150 (MQ=255)                                                                                           ctcGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTtctc                                                           <  1:1366944/150‑1 (MQ=255)                                                                                            ttggCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTctct                                                          >  2:1013732/3‑150 (MQ=255)                                                                                                 cAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGc                                                     >  1:859494/1‑150 (MQ=255)                                                                                                     gcctgagcctTAACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCATCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGc                                                 <  2:499038/150‑1 (MQ=255)                                                                                                       ctgagcctTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGTGCT‑TCGTCGACAAGCTGAGCAGCGGGTTTCTTGCTTTGCTCGATGAGTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTc                                               >  1:667736/1‑150 (MQ=255)                                                                                                        tgagcctTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTcc                                              <  2:1544951/150‑1 (MQ=255)                                                                                                         gagcctTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCa                                             <  2:925265/150‑1 (MQ=255)                                                                                                         gagcctTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCa                                             >  1:4431/1‑150 (MQ=255)                                                                                                              ttCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCttt                                                                                         <  2:236522/101‑1 (MQ=255)                                                                                                              ttCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCttt                                                                                         >  1:236522/1‑101 (MQ=255)                                                                                                                           cTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCAGGTCGCGAGCTGCGCGGt                           <  2:812090/150‑1 (MQ=255)                                                                                                                            tt‑‑CGACGCGAGCCTGTTCACGGGCT‑Tcgtcgacaagctgaccgtgtgaaggctcaggctctggccgagatcgaacaggaactgaacagcgctaaagacgccctgcgtgcccaagtgggtgctctggccgttggtggtgctgaaaagatcc                          >  2:200464‑M2/1‑26 (MQ=255)                                                                                                                            tt‑‑CGACGCGAGCCTGTTCACGGGCT‑Tcgtcgaagctgaccgtgtgaaggctcaggctctggccgagatcgaacaggaactgaacagcgctaaagacgccctgcgt                                                                       <  2:1426297‑M2/105‑80 (MQ=255)                                                                                                                            tt‑‑CGACGCGAGCCTGTTCACGGGCT‑Tcgtcgaagctgaccgtgtgaaggctcaggctctggccgagatcgaacaggaactgaacagcgctaaagacgccctgcgt                                                                       >  1:1426297‑M2/1‑26 (MQ=255)                                                                                                                             t‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCAGGTCGCGAGCTGCGCGGTTg                         >  1:1603360/1‑150 (MQ=255)                                                                                                                                         ccTGTTCACGGGCT‑Tcgtcgaagctgaccgtgtgaaggctcaggctctggccgagatcgaacaggaactgaacagcgctaaagacgccctgcgtgcccaagtgggtgctctggccgttggtggtgctgaaaagatccttggcgccacaat               >  1:1146283‑M2/1‑15 (MQ=255)                                                                                                                                         ccTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCtt                                                         >  1:563038/1‑108 (MQ=255)                                                                                                                                         ccTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCtt                                                         <  2:563038/108‑1 (MQ=255)                                                                                                                                          cTGTTCACGGTCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCAGGTCGCGAGCTGCGCGGTTGGCAGCGTCCaa              <  2:336127/150‑1 (MQ=255)                                                                                                                                                    gCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTtc                                                             >  2:384924/1‑93 (MQ=255)                                                                                                                                                    gCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTtc                                                             <  1:384924/93‑1 (MQ=255)                                                                                                                                                      t‑tCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCAGGTCGCGAGCTGCGCGGTTGGCAGCGTCCAAGCCGTCGGCAAt  <  2:210679/150‑1 (MQ=255)                                                                                                                                                      t‑tCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCAGGTCGCGAGCTGCGCGGTTGGCAGCGTCCAAGCCGTCGGCAAt  >  1:433945/1‑150 (MQ=255)                                                                                                                                                        |                                                                                                                                                     GGCGCCAAGGATCTTTTCAGCACCACCAACGGCCAGAGCACCCACTTGGGCACGCAGGGCGTCTTTAGCGCTGTTCAGTTCCTGTTCGATCTCGGCCAGAGCCTGAGCCTTCACACGGTCAGCTT‑‑CGACGCGAGCCTGTTCACGGGCT‑TCGTCGACAAGCTGAGCAGCGCGTTTCTTGCTTTGCTCGATGATTTCGGCTGCTTGTGCTTTAGCTTCACGCAGTTGCTGACCCGCTTTCTCTTGGGCCAGCTCCAGGTCGCGAGCTGCGCGGTTGGCAGCGTCCAAGCCGTCGGCAAT  >  NC_002947/6179761‑6180057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.