| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,602,232 | T→A | 8.9% | D434V (GAT→GTT) | PP_4924 ← | subtilase family serine protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,602,232 | 0 | T | A | 8.9% | 239.9 / 13.3 | 79 | D434V (GAT→GTT) | PP_4924 | subtilase family serine protease |
| Reads supporting (aligned to +/- strand): ref base T (36/36); new base A (4/3); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.50e-01 | |||||||||||
TACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTACCGTTGTCATGCA > NC_002947/5602084‑5602379 | tACCGGCTCGACCGGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATc > 2:274633/1‑150 (MQ=255) gCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCCTGCTACTGCACTGAGGTTATGTCACCCGCATCGGCACGTTCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGt < 1:774419/150‑1 (MQ=255) cTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGtt > 2:182962/1‑150 (MQ=255) tCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTATCAGGCATCGGCACGCCCGTCGTGGTTGCCATAGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTg < 1:268875/150‑1 (MQ=255) ccTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGt > 2:930393/1‑150 (MQ=255) ccTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCATTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGt < 2:1182668/150‑1 (MQ=255) cTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTc > 2:1483926/1‑150 (MQ=255) cGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAacac > 1:992935/1‑150 (MQ=255) aGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGGTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACtt < 2:1121659/150‑1 (MQ=255) ttGAACTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGcc < 1:435419/150‑1 (MQ=255) aTCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAgg > 1:338858/1‑150 (MQ=255) tCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAggg > 1:915516/1‑150 (MQ=255) cTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGggc > 1:696671/1‑150 (MQ=255) ggCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCAACGCCGATGGCGTc < 1:663346/133‑1 (MQ=255) ggCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCAACGCCGATGGCGTc > 2:663346/1‑133 (MQ=255) tAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGa > 1:687946/1‑150 (MQ=255) tGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGc < 2:915516/150‑1 (MQ=255) gCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGcc < 1:1181313/150‑1 (MQ=255) gCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCt > 1:774294/1‑150 (MQ=255) cTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGaa > 1:680310/1‑150 (MQ=255) cTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGaa < 2:774294/150‑1 (MQ=255) tGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATcc > 1:364042/1‑144 (MQ=255) tGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATcc < 2:364042/144‑1 (MQ=255) tGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAAc < 2:680310/150‑1 (MQ=255) tGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAAc < 1:72914/150‑1 (MQ=255) aTGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCg < 2:338858/150‑1 (MQ=255) cgcTTAGCTGACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGttt > 2:814397/3‑150 (MQ=255) ccTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGggcgg > 2:1436905/1‑125 (MQ=255) ccTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGggcgg < 1:1436905/125‑1 (MQ=255) ccTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCAACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGCACGGCGTTTc < 2:502792/150‑1 (MQ=255) cTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCa > 1:967196/1‑150 (MQ=255) cTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCAACGCCGATGGCGTCa < 2:26064/108‑1 (MQ=255) cTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCAACGCCGATGGCGTCa > 1:26064/1‑108 (MQ=255) ttAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCAc < 2:696671/150‑1 (MQ=255) cACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGc > 1:1418638/1‑150 (MQ=255) gCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAaca > 2:1259132/1‑99 (MQ=255) gCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAaca < 1:1259132/99‑1 (MQ=255) gCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCa < 1:1483926/150‑1 (MQ=255) cGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCActgcct < 1:274633/150‑1 (MQ=255) cgtcgtGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTgcctgcct < 1:1552557/150‑1 (MQ=255) tGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGCTTCACCAGAGCTGCCATCACTACCTGCCTTgccc > 2:1488617/1‑149 (MQ=255) ggTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTgccgc > 1:293673/1‑150 (MQ=255) gTTGCCATCGACCCACACCTTCAATTGCGCCCAGGCGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGATCTGCCATCACTGCCTGCCTTgccgcc > 1:1237788/1‑150 (MQ=255) gTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTgccgcc > 2:476188/1‑150 (MQ=255) gCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgta < 1:182962/150‑1 (MQ=255) ccATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgtag < 2:28835/150‑1 (MQ=255) cATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCgtagt > 1:1514820/1‑150 (MQ=255) gACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACAAGAGCTGCCAGCACTGCCTGCCTTGCCGCCGTAGGATTc > 2:353356/1‑150 (MQ=255) caCCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACTGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTc < 2:687946/149‑1 (MQ=255) acCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCActgc < 1:405882/121‑1 (MQ=255) acCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCActgc > 2:405882/1‑121 (MQ=255) cTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCAc > 2:934719/1‑101 (MQ=255) cTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCAc < 1:934719/101‑1 (MQ=255) tCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAgct > 1:93891/1‑150 (MQ=255) cAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAgctg < 1:814397/150‑1 (MQ=255) aaTTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAgctgg < 2:167003/150‑1 (MQ=255) aaTTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAgct > 2:838512/1‑148 (MQ=255) aaTTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAgct < 1:838512/148‑1 (MQ=255) cgcCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGTCGGCGAAGCCATCCTTGCACGGCGTTTCACCAGAACTGCCATGGCTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGAc < 1:1266000/150‑1 (MQ=255) ccAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCg < 2:1612282/83‑1 (MQ=255) ccAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCg > 1:1612282/1‑83 (MQ=255) ccAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCAt > 2:1616412/1‑101 (MQ=255) ccAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCAt < 1:1616412/101‑1 (MQ=255) cTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGc > 2:1428951/1‑150 (MQ=255) tCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCg < 1:476188/150‑1 (MQ=255) aCGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTa > 2:1366479/1‑150 (MQ=255) gTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGggcgg > 1:74993/1‑44 (MQ=255) gTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGggcgg < 2:74993/44‑1 (MQ=255) ttGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTACCg > 1:426293/1‑150 (MQ=255) tgttgaCGCCAACGCCGATGGCGTCATCACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTACCGt > 1:327811/4‑150 (MQ=255) tgatgaCGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGaa > 1:1546352/1‑115 (MQ=255) tgatgaCGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGaa < 2:1546352/115‑1 (MQ=255) gttgaCGCCAACGCCGATGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTc < 2:76840/106‑1 (MQ=255) gttgaCGCCAACGCCGATGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTc > 1:76840/3‑108 (MQ=255) gatgaCGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTACCGtt < 2:293673/150‑1 (MQ=255) ccATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTACCGTTGTCATGc < 2:1514820/150‑1 (MQ=255) cATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTACCGTTGTCATGCa > 2:1394121/1‑150 (MQ=255) aTCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAgctgg > 2:793209/1‑112 (MQ=255) aTCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAgctgg < 1:793209/112‑1 (MQ=255) | TACCGGCTCGACCTGGCCGAGCTTGATCTGGCTAATGCCATGCTCCTGCAATGCCCTTAGCTCACCGGCATCGGCACGCCCGTCGTGGTTGCCATCGACCCACACCTTCAATTGCGCCCAGACGGCGTCTTCAACGTTGATGACGCCATCGGCGTTGGCGTCAACACTTGCCAGGGCGGCGAAGCCATCCTTGAACGGCGTTTCACCAGAGCTGCCATCACTGCCTGCCTTGCCGCCGTAGTATTCGGAGAACAGCTGGCTGACGTTGCTCACCTGGCCGGTACCGTTGTCATGCA > NC_002947/5602084‑5602379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |