| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 66,371 | G→A | 5.3% | G477S (GGT→AGT) | betA‑I → | choline dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 66,371 | 0 | G | A | 5.3% | 229.8 / 2.5 | 76 | G477S (GGT→AGT) | betA‑I | choline dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (39/33); new base A (2/2); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.20e-01 | |||||||||||
ATGCCATTCGCCTTACCCGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCACCCTGATGATCGCC > NC_002947/66222‑66517 | aTGCCATTCGCCTTACCCGGCGCATCGTCCTGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcg < 1:1495945/150‑1 (MQ=255)aTGCCATTCGCCTTACCCGGCGCATCGTCCTGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcg > 2:1495945/1‑150 (MQ=255) gCCATTCGCCTTACCCGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcggt > 2:541528/1‑150 (MQ=255) ccATTCGCCTTACACGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTa > 2:264359/1‑150 (MQ=255) cATTCGCCTTACCCGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTAc > 1:1406647/1‑150 (MQ=255) ccGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcggt < 1:1452743/136‑1 (MQ=255) ccGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcggt > 2:1452743/1‑136 (MQ=255) ccGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTAc > 1:56919/1‑138 (MQ=255) ccGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTAc < 2:56919/138‑1 (MQ=255) ccGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATggg > 1:939456/1‑150 (MQ=255) ccGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATggg < 1:480737/150‑1 (MQ=255) gcgcATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcgg < 1:732295/132‑1 (MQ=255) gcgcATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcgg > 2:732295/1‑132 (MQ=255) aTCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCAGTACCTGTCGc > 2:1453693/1‑138 (MQ=255) aTCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCAGTACCTGTCGc < 1:1453693/138‑1 (MQ=255) cGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGc < 2:1292417/150‑1 (MQ=255) gTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGcc > 2:947134/1‑150 (MQ=255) tCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcg < 2:252496/123‑1 (MQ=255) tCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCcggtcg > 1:252496/1‑123 (MQ=255) tCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCa > 1:1494183/1‑150 (MQ=255) cccTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACGTTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGt > 1:514378/1‑150 (MQ=255) cTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGAt > 2:1268126/1‑150 (MQ=255) tCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCAGTACCTGTCGCATGGGCAACGGTGCCAt < 2:1451025/136‑1 (MQ=255) tCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCAGTACCTGTCGCATGGGCAACGGTGCCAt > 1:1451025/1‑136 (MQ=255) ccgcTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAAcc < 1:96317/150‑1 (MQ=255) gcTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAg < 1:1268126/150‑1 (MQ=255) gAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTgcgc < 1:947134/150‑1 (MQ=255) gCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTTGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATaa < 2:895464/138‑1 (MQ=255) gCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATaa > 1:895464/1‑138 (MQ=255) gCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGt > 1:1491790/1‑150 (MQ=255) ccAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGc > 1:866666/1‑150 (MQ=255) cAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTgcgc < 2:769345/145‑1 (MQ=255) cAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTgcgc > 1:769345/1‑145 (MQ=255) cAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCa > 1:796426/1‑150 (MQ=255) cAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCa > 2:221045/1‑150 (MQ=255) aaGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTc < 1:122642/100‑1 (MQ=255) aaGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTc > 2:122642/1‑100 (MQ=255) aGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATg > 2:718238/1‑150 (MQ=255) ggAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATgg < 2:939456/150‑1 (MQ=255) ggAATATTTGCCGCGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCATGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGGCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATgg < 1:264359/150‑1 (MQ=255) aaTATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCa < 2:866666/150‑1 (MQ=255) ccGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTtgt > 1:557724/1‑116 (MQ=255) ccGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTtgt < 2:557724/116‑1 (MQ=255) gggCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGAt > 2:1555680/1‑118 (MQ=255) gggCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGAt < 1:1555680/118‑1 (MQ=255) gCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTAc < 2:1494183/150‑1 (MQ=255) gCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTAc < 2:1406647/150‑1 (MQ=255) cTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGcc < 1:212839/150‑1 (MQ=255) aaaGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATg < 2:1491790/150‑1 (MQ=255) gCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCtt < 1:37939/150‑1 (MQ=255) ttCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAg > 1:678814/1‑150 (MQ=255) ttCGAGGCCGCTGGCAAGATCGGAACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCg < 1:1012342/115‑1 (MQ=255) ctCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCg > 2:1012342/2‑115 (MQ=255) gCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATAGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATACACGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTcc < 2:640079/150‑1 (MQ=255) tGGCAAGATAGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCgg > 1:1506131/1‑150 (MQ=255) gCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCa > 2:674062/1‑150 (MQ=255) aaGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAAACAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAAt > 2:388321/1‑150 (MQ=255) aGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCg > 2:1302062/1‑144 (MQ=255) aGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCg < 1:1302062/144‑1 (MQ=255) tCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATgg > 2:1363168/1‑57 (MQ=255) tCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATgg < 1:1363168/57‑1 (MQ=255) tCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATgg > 2:1165554/1‑88 (MQ=255) tCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATgg < 1:1165554/88‑1 (MQ=255) tCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACgt > 1:976383/1‑150 (MQ=255) cGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGAt > 1:5788/1‑120 (MQ=255) cGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGAt < 2:5788/120‑1 (MQ=255) ggCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACgtgt > 1:241870/1‑150 (MQ=255) gCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGtt > 1:956978/1‑150 (MQ=255) accaccATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTcc > 1:1017240/1‑150 (MQ=255) cgccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTcccc > 2:122936/3‑150 (MQ=255) caccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCACCGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACgt < 1:647036/143‑1 (MQ=255) caccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACgt > 2:647036/1‑143 (MQ=255) accaTCTTCCACCCGGTCGGTACCCGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGc < 1:995272/81‑1 (MQ=255) accaTCTTCCACCCGGTCGGTACCCGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGc > 2:995272/1‑81 (MQ=255) ccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCt > 1:974587/1‑67 (MQ=255) ccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCt < 2:974587/67‑1 (MQ=255) ccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCa > 1:946255/1‑150 (MQ=255) ccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCa < 1:541528/150‑1 (MQ=255) ccaTCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCa < 1:122936/150‑1 (MQ=255) cACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATAc < 2:1196403/131‑1 (MQ=255) cACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATAc > 1:1196403/1‑131 (MQ=255) cACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTACGGGAGTAGTTGTTCCCCCACCCcgatt > 2:1198513/1‑149 (MQ=255) cccGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCACCCTgatgat < 2:796426/150‑1 (MQ=255) ccGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTgcgc < 2:1626692/60‑1 (MQ=255) ccGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTgcgc > 1:1626692/1‑60 (MQ=255) gtcggtACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCCCCCTGATGATCGcc < 2:956978/150‑1 (MQ=255) | ATGCCATTCGCCTTACCCGGCGCATCGTCCAGGCCCCTGCCCTCGCCGCTTTCGAGCCCAAGGAATATTTGCCGGGCCCGGCGCTGCAAAGCGAGGAAGACCTGTTCGAGGCCGCTGGCAAGATCGGCACCACCATCTTCCACCCGGTCGGTACCTGTCGCATGGGCAACGGTGCCATGGACGTTGTGGATAACCAGCTGCGCGTGCATGGCATCCCCGGTCTACGTGTAGCCGATGCTTCGATCATGCCGCAGATAACTTCCGGCAATACGTGTTCCCCCACCCTGATGATCGCC > NC_002947/66222‑66517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |