Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 668,267 | A→C | 5.6% | F87C (TTC→TGC) ‡ | PP_0571 ← | membrane protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 668,267 | 0 | A | C | 5.6% | 267.0 / 5.8 | 90 | F87C (TTC→TGC) ‡ | PP_0571 | membrane protein |
Reads supporting (aligned to +/- strand): ref base A (45/39); new base C (2/3); total (47/43) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.64e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 |
CGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGAACAACC > NC_002947/668119‑668405 | cgAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGaa < 1:575913/150‑1 (MQ=255) gAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAAt > 1:94198/1‑150 (MQ=255) aGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATgc > 1:728224/1‑150 (MQ=255) gAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATTCATGcgcgc < 1:1389502/150‑2 (MQ=255) aaaGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGa > 1:585643/1‑150 (MQ=255) aaaGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGa > 2:533599/1‑150 (MQ=255) cTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATTCATGcgcgc > 2:1391380/1‑143 (MQ=255) cTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATTCATGcgcgc < 1:1391380/144‑2 (MQ=255) cTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGcc > 2:585176/1‑150 (MQ=255) cTGGGGCTGCTGTGCAGCACTGTCGCGCCGCTGGGCAGCAGCTGACCTGACCGTACTTATGAGTGGATCATGCAGCTCATCACCCACAGCCCCAGCACCAGCCAGCTGATTCCGCGGCTGATCGCGGCGCGTCTGTATGCGCTTATTgtt < 2:766319/150‑3 (MQ=255) cTGGCGCGGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCACACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGcc < 2:1432463/150‑1 (MQ=255) ggggCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGa < 1:404045/150‑1 (MQ=255) gctgctGTGCAGACCAGTGAGAACTCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTa < 2:94198/150‑1 (MQ=255) gctgTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAcag < 2:1516652/150‑1 (MQ=255) tgCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGAtt < 1:1159776/135‑1 (MQ=255) tgCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGAtt > 2:1159776/1‑135 (MQ=255) gCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAgcagca > 1:117018/1‑150 (MQ=255) gCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCa < 2:308531/150‑1 (MQ=255) gCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAg > 1:1501070/1‑150 (MQ=255) cAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAgg < 1:1004703/150‑1 (MQ=255) aaGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCCGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAca < 2:32720/126‑1 (MQ=255) aaGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTAca > 1:32720/1‑126 (MQ=255) aGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGc < 2:117018/150‑1 (MQ=255) ccACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAAt < 2:294910/97‑1 (MQ=255) ccACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAAt > 1:294910/1‑97 (MQ=255) ccACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGcgcg < 1:295874/102‑1 (MQ=255) ccACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGcgcg > 2:295874/1‑102 (MQ=255) ccACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCt > 1:924190/1‑150 (MQ=255) cacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGCTGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTc > 2:532479/1‑150 (MQ=255) cacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTc > 2:572447/1‑150 (MQ=255) cacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTc > 1:634010/1‑150 (MQ=255) aaaGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTcagc > 1:199581/1‑150 (MQ=255) aGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCgatg > 2:1026970/1‑127 (MQ=255) aGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCgatg < 1:1026970/127‑1 (MQ=255) gACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCagcagc < 2:924190/150‑1 (MQ=255) cgcgCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa < 1:533599/150‑1 (MQ=255) cgcgCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa < 2:199581/150‑1 (MQ=255) gcgcAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATc < 2:765530/113‑1 (MQ=255) gcgcAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATc > 1:765530/1‑113 (MQ=255) cgcAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACagcagc > 2:764936/1‑109 (MQ=255) cgcAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACagcagc < 1:764936/109‑1 (MQ=255) cgcAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAgt < 1:585176/150‑1 (MQ=255) gcAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAgtg > 1:839127/1‑150 (MQ=255) aTCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCa > 2:160748/1‑150 (MQ=255) aTCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCa > 2:672934/1‑150 (MQ=255) aGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAgg > 2:1145566/1‑125 (MQ=255) aGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAgg < 1:1145566/125‑1 (MQ=255) gTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGcc < 1:324587/150‑1 (MQ=255) gATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCaa > 2:725592/1‑150 (MQ=255) aTCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAg < 1:672934/150‑1 (MQ=255) cccAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGGTGATCGATGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGAAGATCAGGGCCAGGGTGCTCAGCAGCGAAGTGTCCATGCGCAAGGTgc > 1:378686/1‑150 (MQ=255) ccAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAg < 1:1183736/108‑1 (MQ=255) ccAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAg > 2:1183736/1‑108 (MQ=255) ccAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa > 2:969217/1‑130 (MQ=255) ccAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa < 1:969217/130‑1 (MQ=255) ccAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTg > 1:398549/1‑148 (MQ=255) ccAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTg < 2:398549/148‑1 (MQ=255) cAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGCCCATGCCCAAGGTgcgc < 2:839127/150‑1 (MQ=255) tcatcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACa < 1:52966/150‑1 (MQ=255) catcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAg < 2:1501070/150‑1 (MQ=255) atcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGTTTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTca < 2:638881/115‑1 (MQ=255) atcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTca > 1:638881/1‑115 (MQ=255) tcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGcc < 2:1453471/71‑1 (MQ=255) tcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGcc > 1:1453471/1‑71 (MQ=255) tcaCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGc > 2:1044217/1‑150 (MQ=255) aCCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCa > 2:1286532/1‑150 (MQ=255) ccACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTAAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATc > 1:582978/1‑150 (MQ=255) gCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGa > 1:763439/1‑150 (MQ=255) ccccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGaa < 1:572447/150‑1 (MQ=255) ccccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGaa > 1:1166233/1‑150 (MQ=255) cccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTcag < 1:573703/104‑1 (MQ=255) cccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTcag > 2:573703/1‑104 (MQ=255) cccAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAg > 2:261885/1‑150 (MQ=255) gccagATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCgg > 2:1048946/1‑150 (MQ=255) gccagATGATTCCGAGGATGATCGAGGCGCGCATGAACCACCGGCCAGAACTATTTAGCAACATCAGGCCGAGTATCAGGGCCAGGATGCTCAGGAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCgg > 1:445068/1‑150 (MQ=255) ccagATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa < 2:1614330/100‑1 (MQ=255) ccagATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGaa > 1:1614330/1‑100 (MQ=255) cagATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTgcgc < 2:1577545/120‑1 (MQ=255) cagATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTgcgc > 1:1577545/1‑120 (MQ=255) cagATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCa > 1:1210228/1‑150 (MQ=255) tgatTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTgg < 1:1048946/150‑1 (MQ=255) atTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGcc < 1:532479/150‑1 (MQ=255) ttCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCca < 2:585643/150‑1 (MQ=255) ttCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTAAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCca < 2:582978/150‑1 (MQ=255) gAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGc > 1:1476320/1‑134 (MQ=255) gAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGc < 2:1476320/134‑1 (MQ=255) aatccgcgcATTCATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGaac < 2:852438/143‑1 (MQ=255) aatccgcgcATTCATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGaac > 1:852438/5‑147 (MQ=255) aGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAgtgt < 1:937427/81‑1 (MQ=255) aGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAgtgt > 2:937427/1‑81 (MQ=255) aGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGAACAAcc > 1:93458/1‑150 (MQ=255) | CGAAGCTGAAAGCCTGGGGCTGCTGTGCAGCCCTGTCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAGCAGCGAAGTGTCCATGCCCAAGGTGCGCGACAGGCCATCGATGAAGTTGCCACCGGCATTGGCCAGCAGGTTGAACAACC > NC_002947/668119‑668405 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |