Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,367,453 A→C 9.9% Q76H (CAA→CAC gdhB → NAD‑specific glutamate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,367,4530AC 9.9% 155.7 / 11.2 61Q76H (CAA→CACgdhBNAD‑specific glutamate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (27/28);  new base C (2/4);  total (29/32)
Fisher's exact test for biased strand distribution p-value = 6.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.46e-01

CCCTGCCACAAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCA  >  NC_002947/2367308‑2367599
                                                                                                                                                 |                                                                                                                                                  
cccTGCCACAAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGc                                                                                                                                                <  2:1300544/150‑1 (MQ=255)
  cTGCCACAAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCgg                                                                                                                                              <  2:876856/150‑1 (MQ=255)
  cTGCCACAAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCgg                                                                                                                                              <  1:623045/150‑1 (MQ=255)
  cTGCCACAAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCAGAATACCCGCAAGTGCgg                                                                                                                                              <  2:112791/150‑1 (MQ=255)
       acaAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCACTTGCGGgtatt                                                                                                                                         >  1:618560/1‑147 (MQ=255)
       acaAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAACACCCGCACTTGCGGgtatt                                                                                                                                         <  1:421270/150‑4 (MQ=255)
          ggTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCACTTGCGGgtattcgg                                                                                                                                      <  2:445004/149‑7 (MQ=255)
          aGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCACTTGCGGgtattcgg                                                                                                                                      <  2:618560/150‑7 (MQ=255)
              gcgcTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCt                                                                                                                                  >  1:330989/1‑150 (MQ=255)
                   gTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCACTTGCGGgtattcg                                                                                                                                       >  1:136583/1‑135 (MQ=255)
                   gTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCACTTGCGGgtattcg                                                                                                                                       <  2:136583/140‑6 (MQ=255)
                   gTTCGCCGAGCAGGTCTTCGGCATCATCGCTCTGGACGAACTCACGGTGCTCTGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTTGCGCATCATCGAGCGTTTCTACTCCGAATACCCGCAAGTGCGGGTGTTCAACCCTGATTa                                                                                                                             >  2:229439/1‑150 (MQ=255)
                   cttCGCCGAGCAGTTTTTCTGCATCATCCCTCTGCACGAACTCACCACGCGCAGGTTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATGATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTa                                                                                                                             <  2:156728/149‑1 (MQ=255)
                    ttCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTAc                                                                                                                            <  1:705746/150‑1 (MQ=255)
                    ttCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTAc                                                                                                                            >  2:587780/1‑150 (MQ=255)
                       gCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGaa                                                                                                                         >  1:174270/1‑150 (MQ=255)
                        ccGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAAc                                                                                                                        <  2:1305740/150‑1 (MQ=255)
                                           catcTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGAc                                                                                                     <  2:218004/150‑1 (MQ=255)
                                            atcTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGAcc                                                                                                    >  1:278061/1‑150 (MQ=255)
                                              ctctctGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCa                                                                                                           <  1:1332616/141‑1 (MQ=255)
                                              ctctctGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCa                                                                                                           >  2:1332616/1‑141 (MQ=255)
                                                   tGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGAGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACACCCCTGATTACGAACGCAATGGCTGGCATTCGACCCATACCg                                                                                             >  1:1011359/1‑150 (MQ=255)
                                                     gACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATa                                                                                                >  2:1333318/1‑145 (MQ=255)
                                                     gACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATa                                                                                                <  1:1333318/145‑1 (MQ=255)
                                                     gACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTg                                                                                           <  1:1061794/150‑1 (MQ=255)
                                                        gAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAAtggctgg                                                                                                             >  1:1031598/1‑129 (MQ=255)
                                                        gAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAAtggctgg                                                                                                             <  2:1031598/129‑1 (MQ=255)
                                                        gAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTc                                                                                        >  2:918170/1‑150 (MQ=255)
                                                          aCTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGa                                                                                      >  1:336604/1‑150 (MQ=255)
                                                                                gACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAg                                                                                    <  2:673879/130‑1 (MQ=255)
                                                                                gACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAg                                                                                    >  1:673879/1‑130 (MQ=255)
                                                                                     ggCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCt                                                           <  1:33438/150‑1 (MQ=255)
                                                                                      gCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTg                                                          <  2:174270/150‑1 (MQ=255)
                                                                                      gCCGGCTCCACCCGGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTg                                                          <  2:41085/150‑1 (MQ=255)
                                                                                              cACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTg                                                                                           <  2:1332840/109‑1 (MQ=255)
                                                                                              cACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTg                                                                                           >  1:1332840/1‑109 (MQ=255)
                                                                                              cACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAg                                                                                    >  1:174237/1‑116 (MQ=255)
                                                                                              cACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAg                                                                                    <  2:174237/116‑1 (MQ=255)
                                                                                              cACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTc                                                  >  1:122524/1‑150 (MQ=255)
                                                                                               aCCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCg                                                 >  2:525422/1‑150 (MQ=255)
                                                                                                 ccTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAAcc                                                                                                                                    >  1:854567/1‑65 (MQ=255)
                                                                                                 ccTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAAcc                                                                                                                                    <  2:854567/65‑1 (MQ=255)
                                                                                                 ccTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCt                                                                                                                                  <  2:1318713/67‑1 (MQ=255)
                                                                                                 ccTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCt                                                                                                                                  >  1:1318713/1‑67 (MQ=255)
                                                                                                 ccTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGt                                               <  2:330989/150‑1 (MQ=255)
                                                                                                         ccTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTgg                                                                                          <  2:857312/99‑1 (MQ=255)
                                                                                                         ccTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTgg                                                                                          >  1:857312/1‑99 (MQ=255)
                                                                                                          cTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATAc                                                                                               <  1:726330/93‑1 (MQ=255)
                                                                                                          cTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATAc                                                                                               >  2:726330/1‑93 (MQ=255)
                                                                                                              cgcATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTc                                  <  1:796949/150‑1 (MQ=255)
                                                                                                                    atcGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAAccgc                            >  1:1573567/1‑150 (MQ=255)
                                                                                                                       gAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGt                         >  2:1328925/1‑150 (MQ=255)
                                                                                                                       gAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGt                         >  2:1526190/1‑150 (MQ=255)
                                                                                                                              tCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACa                  <  1:1328925/150‑1 (MQ=255)
                                                                                                                                   cccGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATc             <  1:587780/150‑1 (MQ=255)
                                                                                                                                   cccGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATc             >  2:892332/1‑150 (MQ=255)
                                                                                                                                      gAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCcac          <  1:1526190/150‑1 (MQ=255)
                                                                                                                                             cGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCcaca         >  2:1339853/1‑144 (MQ=255)
                                                                                                                                             cGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCcaca         <  1:1339853/144‑1 (MQ=255)
                                                                                                                                             cGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGc   >  2:426783/1‑150 (MQ=255)
                                                                                                                                              gCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCa  >  1:273475/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CCCTGCCACAAGTGGCGCTGTTCGCCGAGCAGTTCTTCGGCATCATCTCTCTGGACGAACTCACCCAGCGCAGGCTTTCCGACCTGGCCGGCTGCACCCTGTCAGCCTGGCGCATCATCGAGCGTTTCGACCCCGAATACCCGCAAGTGCGGGTGTACAACCCTGATTACGAACGCAATGGCTGGCAGTCGACCCATACCGTGGTCGAAGTGCTGCACCATGACCTGCCGTTCCTGGTCGACTCGGTGCGCACCGAGCTCAACCGCCGTGGCTACAGCATCCACACCCTGCA  >  NC_002947/2367308‑2367599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: