Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,383,806 C→G 11.1% G45A (GGC→GCC)  PP_2091 ← serine/threonine‑protein kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,383,8060CG11.1% 186.8 / 14.3 63G45A (GGC→GCC) PP_2091serine/threonine‑protein kinase
Reads supporting (aligned to +/- strand):  ref base C (26/30);  new base G (3/4);  total (29/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.72e-01

TGGGCGCGCAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAGCTCAGTTGCAGGCTCATCGGCG  >  NC_002947/2383659‑2383944
                                                                                                                                                   |                                                                                                                                          
tGGGCGCGCAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCg                                                                                                                                          >  1:335314/1‑150 (MQ=255)
     gcgcAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGc                                                                                                                                     >  1:1432560/1‑150 (MQ=255)
      cgcAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGcc                                                                                                                                    >  2:1187365/1‑150 (MQ=255)
       gcAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCa                                                                                                                                   >  2:197433/1‑150 (MQ=255)
        cAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAg                                                                                                                                  <  2:1095837/150‑1 (MQ=255)
        cAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGGCGGTACATTGGCCGACGGCGTCAGCCaa                                                                                                                                  <  2:598837/150‑2 (MQ=255)
         aaCCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCaat                                                                                                                                 <  1:912922/150‑3 (MQ=255)
         aaCCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAgg                                                                                                                                 >  1:527970/1‑150 (MQ=255)
         aaCCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAgg                                                                                                                                 <  1:1574703/150‑1 (MQ=255)
          aCCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAggg                                                                                                                                <  1:1187365/150‑1 (MQ=255)
            cAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCg                                                                                                                              >  2:573419/1‑150 (MQ=255)
             aGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGa                                                                                                                             >  2:96601/1‑150 (MQ=255)
                 gTTGTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCAAGGTGGCCGCCGTCGCGTCGTTCTCCCGGTCCGGTGGGTGGAGGCTGGCGTTCGCCCTCAGGGCGTCGTCGGTACATTGGTTGACGCCGGCGGCCAGGGCGAACAg                                                                                                                         <  2:596793/150‑1 (MQ=255)
                  ttttGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAgg                                                                                                                        >  2:843000/1‑150 (MQ=255)
                              agcagGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCCGACGGCGTCAGc                                                                                                                                     <  1:51059/125‑1 (MQ=255)
                              agcagGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCCGACGGCGTCAGc                                                                                                                                     >  2:51059/1‑125 (MQ=255)
                                cagGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTggc                                                                                                          <  2:729193/150‑1 (MQ=255)
                                cagGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTggc                                                                                                          >  2:511989/1‑150 (MQ=255)
                                   gCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGCCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTggcggc                                                                                                       >  1:1572577/1‑150 (MQ=255)
                                         gAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTc                                                                                                 >  2:1288371/1‑150 (MQ=255)
                                             gCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGt                                                                                             <  1:1451636/150‑1 (MQ=255)
                                              ccTGGGCCACGCGCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTg                                                                                            >  2:1432678/1‑150 (MQ=255)
                                               cTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGc                                                                                           >  1:201161/1‑150 (MQ=255)
                                                ggggCCCCGCTTCAGGTGGCCGGCGTTGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCGGCCAGGGCGCCGTCGGTACGTTGGCTGACGCCGTCGGCGAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGcc                                                                                          <  2:30543/149‑1 (MQ=255)
                                                     cACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGt                                                                                     >  2:206817/1‑150 (MQ=255)
                                                          tCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCa                                                                                >  1:247410/1‑150 (MQ=255)
                                                                  gCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAgg                                                                        <  1:1309114/150‑1 (MQ=255)
                                                                  gCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAgg                                                                        <  1:1125110/150‑1 (MQ=255)
                                                                    cGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCg                                                                                                                                       <  2:707839/85‑1 (MQ=255)
                                                                    cGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCg                                                                                                                                       >  1:707839/1‑85 (MQ=255)
                                                                    cGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCCGACGGCGTCAGCCaa                                                                                                                                  >  1:1315723/1‑89 (MQ=255)
                                                                    cGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCCGACGGCGTCAGCCaa                                                                                                                                  <  2:1315723/90‑2 (MQ=255)
                                                                        gtggcgtAGTAATCCAGGGCCCGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTNTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTcc                                                                  <  1:286943/150‑1 (MQ=255)
                                                                         tggcgtAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCtt                                                                                                                 <  1:833292/102‑1 (MQ=255)
                                                                         tggcgtAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCtt                                                                                                                 >  2:833292/1‑102 (MQ=255)
                                                                               agtaATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGc                                                                                                                    >  2:1540792/1‑93 (MQ=255)
                                                                               agtaATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGc                                                                                                                    <  1:1540792/93‑1 (MQ=255)
                                                                               agtaATCCAGGGCCAGCGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGtttt                                                           <  2:906716/150‑1 (MQ=255)
                                                                                 taATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTcc                                                         <  1:908839/150‑1 (MQ=255)
                                                                                 taATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTcc                                                         <  2:335314/150‑1 (MQ=255)
                                                                                   aTCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAgg                                                                                                                        <  1:854775/85‑1 (MQ=255)
                                                                                   aTCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAgg                                                                                                                        >  2:854775/1‑85 (MQ=255)
                                                                                    tCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCcgcg                                                      >  2:1404794/1‑150 (MQ=255)
                                                                                       aGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGaa                                                                                                                            >  1:229452/1‑77 (MQ=255)
                                                                                       aGGGCCAGTGCCTGCAGGCTGGCGAGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGaa                                                                                                                            <  2:229452/77‑1 (MQ=255)
                                                                                        gggCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCcgcgcgcg                                                  <  1:96601/150‑1 (MQ=255)
                                                                                           ccAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTg                                                                                               >  2:1272774/1‑102 (MQ=255)
                                                                                           ccAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTg                                                                                               <  1:1272774/102‑1 (MQ=255)
                                                                                               tGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGt                                           <  2:1432560/150‑1 (MQ=255)
                                                                                               tGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGt                                           <  1:1404794/150‑1 (MQ=255)
                                                                                                  cTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGgc                                        <  2:464313/150‑1 (MQ=255)
                                                                                                  cTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGgc                                        >  1:858114/1‑150 (MQ=255)
                                                                                                       ggCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCGAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGACGCCGGGTgcgcgcga                                   <  2:565233/150‑8 (MQ=255)
                                                                                                           ggCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTg                               <  1:1288371/150‑1 (MQ=255)
                                                                                                            gcgcgcgcCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTgg                              <  1:511989/150‑1 (MQ=255)
                                                                                                                  gccgccAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAg                        <  1:843000/150‑1 (MQ=255)
                                                                                                                    cgccAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAGCt                      <  2:247410/150‑1 (MQ=255)
                                                                                                                     gccAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCCAAGCTTCGTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAGCTc                     >  1:100355/1‑150 (MQ=255)
                                                                                                                              ccgTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAGCTCAGTTGCAgg            <  2:1572577/150‑1 (MQ=255)
                                                                                                                                 tCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAGCTCAGTTGCAGGCTc         >  2:1371117/1‑150 (MQ=255)
                                                                                                                                        aTTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAGCTCAGTTGCAGGCTCATCGGCg  >  1:733649/1‑150 (MQ=255)
                                                                                                                                         ctGGCCGACGGCGTCAGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGtt                                                             >  1:1495809/2‑90 (MQ=255)
                                                                                                                                         ctGGCCGACGGCGTCAGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGtt                                                             <  2:1495809/89‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                          
TGGGCGCGCAACCAGCGGTTTTGCGCCAGCAGCAGGCGGTCGAGGGCCTGGGCCACGCTCCAGGTGGCCGGCGTGGCGTAGTAATCCAGGGCCAGTGCCTGCAGGCTGGCGCGCGCCGCCAGGCCGCCGTCGGTACATTGGCTGACGCCGTCGGCCAGGGCGAACAGGTAGCCTTTGCTGGCGGCCAGTTCTGGTGCCGGCGTGACCAGGCGCAGGGCGTCCTGGTTTTCCGCGCGCGGCCCGGTGGCGCTGGCTTGGGCAAAGCTCAGTTGCAGGCTCATCGGCG  >  NC_002947/2383659‑2383944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: