| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 258,642 | A→G | 7.8% | K59R (AAG→AGG) | PP_0207 → | nitrate ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 258,642 | 0 | A | G | 7.8% | 229.0 / 7.3 | 77 | K59R (AAG→AGG) | PP_0207 | nitrate ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (35/36); new base G (3/3); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.50e-01 | |||||||||||
CTCGCGCTGGCGCTCACTGGCCTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGCCCATCTGGAT > NC_002947/258494‑258784 | cTCGCGCTGGCGCTCACTGGCCTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAg > 2:243519‑M2/1‑149 (MQ=255) gcTGGCGCTCACTGGCCTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACaa > 2:1355230/1‑150 (MQ=255) gcgcTCACTGGCCTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGAc < 1:1429492/150‑1 (MQ=255) tCACCGGCCTGAACGCCAGCGCCGAAACCATACGCAGCGCCTTCGGCACGCAGGGGACGACCATCAAGTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCa < 2:513598/150‑1 (MQ=255) aCTGGCCTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGTTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCAcc < 1:355669/150‑1 (MQ=255) cTGCACGCACGCGCAGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAg < 2:93449/150‑1 (MQ=255) cTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCaa > 2:441455/1‑128 (MQ=255) cTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCaa < 1:441455/128‑1 (MQ=255) cTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAg > 1:1374623/1‑150 (MQ=255) tGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAgg < 2:1374623/150‑1 (MQ=255) cccgcgcCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACCGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGt > 2:1574449/4‑150 (MQ=255) ccAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTCCCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGt < 2:640355/150‑1 (MQ=255) gcCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGgaag > 1:113764/1‑150 (MQ=255) gAAACCATACGCATCGCCATCGGCACCCAGGACACAACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAAc < 1:555714/150‑1 (MQ=255) tACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCaa > 2:5055/1‑106 (MQ=255) tACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCaa < 1:5055/106‑1 (MQ=255) cATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCgg < 2:1447684/150‑1 (MQ=255) aTCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCaa > 1:50342/1‑101 (MQ=255) aTCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCaa < 2:50342/101‑1 (MQ=255) aTCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGt > 1:93015/1‑150 (MQ=255) cGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTgc < 2:93015/150‑1 (MQ=255) gCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGgaag > 2:586533/1‑132 (MQ=255) gCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGgaag < 1:586533/132‑1 (MQ=255) gCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACTTGCCGT‑CGTGCGGCAGgtacttgtccagca > 2:80197‑M2/1‑91 (MQ=255) gCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACTTGCCGT‑CGTGCGGCAGgtacttgtccagca < 1:80197‑M2/105‑15 (MQ=255) ccAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGgaagaa < 1:396383/123‑1 (MQ=255) ccAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGgaagaa > 2:396383/1‑123 (MQ=255) ccAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCaa < 1:1294837/150‑1 (MQ=255) cAGGACACCACCATCAACTGCGCCACCGGGGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAAc > 2:1256164/1‑150 (MQ=255) accaccATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATg > 1:804523/1‑150 (MQ=255) cACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGa > 1:1213541/1‑150 (MQ=255) cACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGa < 1:1355230/150‑1 (MQ=255) ggCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGgc < 2:1597953/150‑1 (MQ=255) ctgctgATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGcc > 1:741810/1‑150 (MQ=255) tgctgATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTc < 1:708629/137‑1 (MQ=255) tgctgATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTc > 2:708629/1‑137 (MQ=255) tgctgATCCGTGAGCTGGGCCTGCTGAACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAg < 1:781069/80‑1 (MQ=255) tgctgATCCGTGAGCTGGGCCTGCTGAACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAg > 2:781069/1‑80 (MQ=255) gctgATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTAc < 2:362538/70‑1 (MQ=255) gctgATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTAc > 1:362538/1‑70 (MQ=255) ctgATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGACATGGTCGCCGGCAAGCTCGACTCCGGCGCCATg < 2:1257289/150‑1 (MQ=255) gATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGc < 2:1101157/150‑1 (MQ=255) ccGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGa < 2:967702/150‑1 (MQ=255) gTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACt > 1:790677/1‑150 (MQ=255) tGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACtt > 1:1158580/1‑150 (MQ=255) gggCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTATCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAgg > 1:1342773/1‑150 (MQ=255) tgGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATg < 1:1257998/98‑1 (MQ=255) tgGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATg > 2:1257998/1‑98 (MQ=255) gACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGATTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCGCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAAc < 1:1574449/150‑1 (MQ=255) gACAAGTACCTGCCGCACGA‑CGGCAAACATAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAAc < 1:1236330/150‑1 (MQ=255) aCAAGTACCTGCCGCACGA‑CGGCAAgtacttgtccagcaggcccagctcacggatcagcaggccaccggtggcgcagttgatggtggtgtcct < 2:695001‑M2/93‑69 (MQ=255) aCAAGTACCTGCCGCACGA‑CGGCAAgtacttgtccagcaggcccagctcacggatcagcaggccaccggtggcgcagttgatggtggtgtcct > 1:695001‑M2/1‑25 (MQ=255) aaGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCAt > 2:1356172/1‑142 (MQ=255) aaGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCAt < 1:1356172/142‑1 (MQ=255) gTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCAc < 2:1510010/63‑1 (MQ=255) gTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCAc > 1:1510010/1‑63 (MQ=255) aCCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAAc < 2:1128681/143‑1 (MQ=255) aCCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAAc < 2:1128501/143‑1 (MQ=255) aCCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAAc > 1:1128681/1‑143 (MQ=255) aCCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAAc > 1:1128501/1‑143 (MQ=255) ccTGCCGCACGA‑CGGCAGgtacttgtccagcaggcccagctcacggatcagcaggccaccggtggcgcagttgatg > 2:587460‑M2/1‑18 (MQ=255) ccTGCCGCACGA‑CGGCAGgtacttgtccagcaggcccagctcacggatcagcaggccaccggtggcgcagttgatg < 1:587460‑M2/76‑59 (MQ=255) ccTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGa < 1:740705/77‑1 (MQ=255) ccTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGa > 2:740705/1‑77 (MQ=255) cTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTc < 2:968298/108‑1 (MQ=255) cTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTc > 1:968298/1‑108 (MQ=255) cTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGcc > 1:614251/1‑150 (MQ=255) cTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCATCGGGATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGcc > 1:1251428/1‑150 (MQ=255) tGCCGCACGA‑CGGCAGgtacttgtccagcaggcccagctcacggatcagcaggccaccggtggcgcagttgatggtggtgtcctgggtgccgatggcgatgc < 2:462133‑M2/102‑87 (MQ=255) tGCCGCACGA‑CGGCAGgtacttgtccagcaggcccagctcacggatcagcaggccaccggtggcgcagttgatggtggtgtcctgggtgccgatggcgatgc > 1:462133‑M2/1‑16 (MQ=255) tGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGcgcc > 2:1468156/1‑70 (MQ=255) tGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGcgcc < 1:1468156/70‑1 (MQ=255) gCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGaaa > 2:1545512/1‑83 (MQ=255) gCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGaaa < 1:1545512/83‑1 (MQ=255) gCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATg < 1:855798/85‑1 (MQ=255) gCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATg > 2:855798/1‑85 (MQ=255) gCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGCCCATCt > 1:656554/1‑150 (MQ=255) acga‑cgGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGtt > 1:1116540/1‑140 (MQ=255) acga‑cgGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGtt < 2:1116540/140‑1 (MQ=255) cga‑cgGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGACATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGCCCATCTGGa > 1:608802/1‑150 (MQ=255) ga‑cgGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCGTTCAACGGCGTTGCCCATCTGGAt < 2:790677/150‑1 (MQ=255) ggCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGCCCATCt < 1:267017/143‑1 (MQ=255) ggCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGCCCATCt > 2:267017/1‑143 (MQ=255) | CTCGCGCTGGCGCTCACTGGCCTGAACGCCAGCGCCGAAACCATACGCATCGCCATCGGCACCCAGGACACCACCATCAACTGCGCCACCGGTGGCCTGCTGATCCGTGAGCTGGGCCTGCTGGACAAGTACCTGCCGCACGA‑CGGCAAGTACAAGGACGCCACCTACCAGGTCGAGTGGAAGAACTTCACCAGCGGTGCGCCGCTGACCAACGAAATGGTCGCCGGCAAGCTCGACTTCGGCGCCATGGCCGACTTCCCAGGGTCATTCAACGGCGTTGCCCATCTGGAT > NC_002947/258494‑258784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |