Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,568,739 T→G 5.3% E284D (GAA→GAC)  PP_2252 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,568,7390TG 5.3% 225.9 / 4.7 76E284D (GAA→GAC) PP_2252hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (42/30);  new base G (2/2);  total (44/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.61e-01

GCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTC  >  NC_002947/2568591‑2568885
                                                                                                                                                     |                                                                                                                                                  
gctCCACCGGCCGCGGCGCACTGTCCAGCAAGCTGTCCTCAACCTTCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAgttgtt                                                                                                                                                   <  1:305346/150‑1 (MQ=255)
  tCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCg                                                                                                                                                 >  2:206072/1‑150 (MQ=255)
    cACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGAc                                                                                                                                               >  1:93109/1‑150 (MQ=255)
             cggcgCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGATGGTCGAACAACTGCgg                                                                                                                                      <  2:455102/150‑1 (MQ=255)
                   aCTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTc                                                                                                                                >  2:444580/1‑150 (MQ=255)
                    cTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCa                                                                                                                               >  1:966201/1‑150 (MQ=255)
                     tGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCAc                                                                                                                              <  1:206072/150‑1 (MQ=255)
                      ggCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCA‑CACCATCCCGCACTAAGAGATAGAACTCCAGACGCAGTATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACg                                                                                                                             <  1:444580/150‑1 (MQ=255)
                       gCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACgg                                                                                                                            <  1:653938/150‑1 (MQ=255)
                        ccAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTACCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGt                                                                                                                           >  1:130975/1‑150 (MQ=255)
                         cAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGAc                                                                                                                                               >  2:518454/1‑129 (MQ=255)
                         cAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGAc                                                                                                                                               <  1:518454/129‑1 (MQ=255)
                           gCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCAt                                                                                                                        <  1:627011/150‑1 (MQ=255)
                             aaGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATgg                                                                                                                      >  1:1009414/1‑150 (MQ=255)
                                     cTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAc                                                                                                              >  1:288189/1‑150 (MQ=255)
                                      tCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAcc                                                                                                             <  1:550957/150‑1 (MQ=255)
                                            tGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTaa                                                                                                       <  1:1372712/150‑1 (MQ=255)
                                                ccGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCgg                                                                                                                                      >  2:1216385/1‑115 (MQ=255)
                                                ccGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCgg                                                                                                                                      <  1:1216385/115‑1 (MQ=255)
                                                     aGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGATGGTCGAACAACTGCgg                                                                                                                                      >  2:481045/1‑110 (MQ=255)
                                                     aGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGATGGTCGAACAACTGCgg                                                                                                                                      <  1:481045/110‑1 (MQ=255)
                                                       gTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGc                                                                                            >  2:206267/1‑150 (MQ=255)
                                                        tAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCa                                                                                           >  2:81928/1‑150 (MQ=255)
                                                          aTAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑ACCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAAt                                                                                         >  2:1190350/1‑150 (MQ=255)
                                                            aGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCg                                                                                       >  2:667455/1‑150 (MQ=255)
                                                             gACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTGCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGa                                                                                      >  1:501301/1‑150 (MQ=255)
                                                              aCCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGaa                                                                                     >  1:299243/1‑150 (MQ=255)
                                                               cccccGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGaaa                                                                                    <  2:1465810/150‑1 (MQ=255)
                                                                ccccGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAat                                                                                   >  2:1441264/1‑150 (MQ=255)
                                                                 cccGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAatc                                                                                  >  2:847727/1‑150 (MQ=255)
                                                                 cccGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAatc                                                                                  >  2:1085352/1‑150 (MQ=255)
                                                                  ccGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCGGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAatca                                                                                 >  1:926668/1‑150 (MQ=255)
                                                                    gCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGTTTCATCACCCCGTAACCGGCTGCGGCAATCGAAatcatc                                                                               <  1:723156/150‑1 (MQ=255)
                                                                      cATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTAAGGATCAACCGACGTTCTTCGACCATCTGCGGGTGGTCACGTTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGc                                                                             <  2:1420674/150‑1 (MQ=255)
                                                                           ccccGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAAGCATCGCCCCTg                                                                        <  2:966301/150‑1 (MQ=255)
                                                                            cccGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAccc                                                                                                            <  2:656349/113‑1 (MQ=255)
                                                                            cccGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCAccc                                                                                                            >  1:656349/1‑113 (MQ=255)
                                                                            cccGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGc                                                                       >  2:740830/1‑150 (MQ=255)
                                                                             ccGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGcc                                                                      >  1:1009821/1‑150 (MQ=255)
                                                                                   tGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTg                                                                <  1:667455/150‑1 (MQ=255)
                                                                                     gCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGcc                                                              >  1:1563424/1‑150 (MQ=255)
                                                                                     gCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGcc                                                              >  1:353363/1‑150 (MQ=255)
                                                                                              cATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGTCGa                                                     >  1:1439288/1‑150 (MQ=255)
                                                                                              cATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGa                                                     >  1:737941/1‑150 (MQ=255)
                                                                                               aTCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTg                                                                        >  2:1047872/1‑130 (MQ=255)
                                                                                               aTCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTg                                                                        <  1:1047872/130‑1 (MQ=255)
                                                                                               aTCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGAt                                                    <  2:299243/150‑1 (MQ=255)
                                                                                                tCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATg                                                   >  1:1407585/1‑150 (MQ=255)
                                                                                                    c‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCAc                                               <  1:206267/150‑1 (MQ=255)
                                                                                                      tCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCATTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACg                                              >  1:1613526/1‑150 (MQ=255)
                                                                                                      tCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACg                                              >  2:189764/1‑150 (MQ=255)
                                                                                                       ccTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACgg                                             <  1:1190350/150‑1 (MQ=255)
                                                                                                       ccTGCCATTCCTGGTTCAACGCCAAGCTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACgg                                             <  2:1613526/150‑1 (MQ=255)
                                                                                                           ccATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACt                                         >  1:813882/1‑150 (MQ=255)
                                                                                                            cATTCCTGCACCAACACCACGTTCAGGATCACCCGTAGTTGTTCGACCATCTGTGGGTGGTCACGGTCATGGGTCACCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTg                                        <  2:687377/150‑1 (MQ=255)
                                                                                                             aTTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTgg                                       >  1:995154/1‑150 (MQ=255)
                                                                                                             aTTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTgg                                       >  1:1589280/1‑150 (MQ=255)
                                                                                                              ttCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGc                                      <  1:189764/150‑1 (MQ=255)
                                                                                                                ccTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGa                                    <  1:985145/150‑1 (MQ=255)
                                                                                                                 cTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGAt                                   >  1:1206021/1‑150 (MQ=255)
                                                                                                                      tCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCcgc                              <  1:1047318/150‑1 (MQ=255)
                                                                                                                        aaCGCCACGTTCAGGATCACCCGCAGTTGTTCGTCCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGt                            <  1:1210020/150‑1 (MQ=255)
                                                                                                                        aaCGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGt                            >  1:727808/1‑150 (MQ=255)
                                                                                                                           gCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAACCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGACATGGCGATCCCGCATggg                         >  2:206959/1‑150 (MQ=255)
                                                                                                                             cACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGcc                                                              <  1:1234866/111‑1 (MQ=255)
                                                                                                                             cACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGcc                                                              >  2:1234866/1‑111 (MQ=255)
                                                                                                                                gTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAg                    <  1:81928/150‑1 (MQ=255)
                                                                                                                                    aGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTg                                        <  2:1444835/126‑1 (MQ=255)
                                                                                                                                    aGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTg                                        >  1:1444835/1‑126 (MQ=255)
                                                                                                                                        tCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGgcgc            >  1:1525510/1‑150 (MQ=255)
                                                                                                                                          aCCCGCAGATGGTCGAACAACTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCa          >  2:1173895/1‑150 (MQ=255)
                                                                                                                                           ccggCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGTGCCAGGGTGGCGCCaa         >  2:844469/4‑150 (MQ=255)
                                                                                                                                              gCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAAt                                                                                         <  2:178463/67‑1 (MQ=255)
                                                                                                                                              gCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAAt                                                                                         >  1:178463/1‑67 (MQ=255)
                                                                                                                                              gCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGc                                                               >  2:1021480/1‑93 (MQ=255)
                                                                                                                                              gCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGc                                                               <  1:1021480/93‑1 (MQ=255)
                                                                                                                                              gCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGgcgcgtcgtg      <  2:62564/150‑7 (MQ=255)
                                                                                                                                                 gttgttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAgg                   >  1:1305772/1‑134 (MQ=255)
                                                                                                                                                 gttgttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAgg                   <  2:1305772/134‑1 (MQ=255)
                                                                                                                                                  ttgttCGACCATCTGCGGGTGGTCACTGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTc  >  1:998898/1‑150 (MQ=255)
                                                                                                                                                  ttgttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGc                                      >  2:424242/1‑114 (MQ=255)
                                                                                                                                                  ttgttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGc                                      <  1:424242/114‑1 (MQ=255)
                                                                                                                                                  ttgttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTc  <  2:926668/150‑1 (MQ=255)
                                                                                                                                                  ttgttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTc  <  1:847727/150‑1 (MQ=255)
                                                                                                                                                  ttgttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTc  <  2:813882/150‑1 (MQ=255)
                                                                                                                                                    gttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTc  >  1:971779/1‑148 (MQ=255)
                                                                                                                                                    gttCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTc  <  2:971779/148‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
GCTCCACCGGCCGCGGCGCACTGGCCAGCAAGCTGTCCTCAACCTGCCCCGACAGGTAATAGACCCCCGCCATGGCCCCGCTCTGGCGGTTCTCCATCAAC‑TCCTGCCATTCCTGGTTCAACGCCACGTTCAGGATCACCCGCAGTTGTTCGACCATCTGCGGGTGGTCACGGTCATGGGTCATCACCCCGTAACCGGCTGCGGCAATCGAAATCATCGCCCCTGCCACCTTGCCCACTGCCGATGCCACGGCACTGGCGATCCCGCGTGGGGCCAGGGTGGCGCCAAGCTTTTC  >  NC_002947/2568591‑2568885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑