| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,771,201 | G→C | 5.3% | intergenic (‑16/‑143) | lpxOA ← / → PP_2424 | Fe(2+)/alpha‑ketoglutarate‑dependent dioxygenase/2'‑5' RNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,771,201 | 0 | G | C | 5.3% | 246.6 / 4.7 | 76 | intergenic (‑16/‑143) | lpxOA/PP_2424 | Fe(2+)/alpha‑ketoglutarate‑dependent dioxygenase/2'‑5' RNA ligase |
| Reads supporting (aligned to +/- strand): ref base G (35/37); new base C (2/2); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.31e-01 | |||||||||||
AGGAAGCTGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGTTTGTATGAT > NC_002947/2771055‑2771348 | aGGAAGCTGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGaaa > 2:288881/1‑150 (MQ=255) ggAAGCTGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGaaaa > 2:464201/1‑150 (MQ=255) gAAGCTGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGaaaaa > 1:1053129/1‑150 (MQ=255) aGCTGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATg < 2:1648409/150‑1 (MQ=255) tGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGcc > 1:453304/1‑150 (MQ=255) tGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGGGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGcc > 1:297141/1‑150 (MQ=255) ttGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCAt < 1:1217376/150‑1 (MQ=255) ggggCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCg > 2:479197/1‑150 (MQ=255) gCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAgg < 2:800277/150‑1 (MQ=255) ccAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGc < 2:453304/150‑1 (MQ=255) gAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATTGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGa < 1:796055/150‑1 (MQ=255) gAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGa > 2:575571/1‑150 (MQ=255) gAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGa > 1:1386547/1‑150 (MQ=255) aaGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAg < 2:475434/150‑1 (MQ=255) aaGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAg < 1:464201/150‑1 (MQ=255) tGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCg > 2:942697/1‑150 (MQ=255) gTCGCCCAGCTGAAGAGTCTGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCAt > 2:146286/1‑150 (MQ=255) cccAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAAc < 1:288881/150‑1 (MQ=255) ccAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATAGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACa > 2:233333/1‑150 (MQ=255) aGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCGTGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAAt < 2:592264/150‑1 (MQ=255) gCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATc < 1:233333/150‑1 (MQ=255) tGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCAt < 2:1631753/150‑1 (MQ=255) tGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCAt > 2:1392660/1‑150 (MQ=255) tGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCAt < 1:938121/150‑1 (MQ=255) gCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATg > 2:269799/1‑150 (MQ=255) ccGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATgg < 1:334779/150‑1 (MQ=255) ccGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATgg < 1:575571/150‑1 (MQ=255) tgGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTAc < 1:966150/150‑1 (MQ=255) tgGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTAc > 2:698777/1‑150 (MQ=255) gCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATggggg < 2:570978/138‑1 (MQ=255) gCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATggggg > 1:570978/1‑138 (MQ=255) gCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCCAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACtt > 2:625540/1‑150 (MQ=255) gCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCCAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACtt > 2:625567/1‑150 (MQ=255) cGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTa < 2:1053129/150‑1 (MQ=255) gTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTAt > 2:497854/1‑140 (MQ=255) gTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTAt < 1:497854/140‑1 (MQ=255) tGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCggg < 1:1166340/150‑1 (MQ=255) tGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCCAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCggg < 1:625567/150‑1 (MQ=255) tGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCCAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCggg < 1:625540/150‑1 (MQ=255) gAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCa > 1:1298125/1‑102 (MQ=255) gAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCAAGCa < 2:1298125/102‑1 (MQ=255) aaCATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGc < 1:942697/150‑1 (MQ=255) cagaGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGa > 1:1646416/4‑150 (MQ=255) aTAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCa < 1:859803/95‑1 (MQ=255) aTAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCa > 2:859803/1‑95 (MQ=255) gCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTg > 1:150400/1‑150 (MQ=255) gCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTg < 1:479197/150‑1 (MQ=255) gCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTg < 2:297141/150‑1 (MQ=255) agaagaCGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAAt > 1:1480719/1‑150 (MQ=255) gAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTAc > 2:1645575/1‑150 (MQ=255) aTAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGaaa < 1:447987/116‑1 (MQ=255) aTAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGaaa > 2:447987/1‑116 (MQ=255) aaGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCtt < 2:1386547/150‑1 (MQ=255) gTACGAGTGCAATTTTCATGGACGTTTACTTGTCGCAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATggg < 1:36465/86‑1 (MQ=255) gTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATggg > 2:36465/1‑86 (MQ=255) tACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTgcg < 1:269799/150‑1 (MQ=255) gaCGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGCAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTgcg > 2:1125767/2‑150 (MQ=255) aaTTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGttt > 2:1285134/1‑150 (MQ=255) aTTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTc < 1:1392660/150‑1 (MQ=255) ttttCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCa < 2:1646416/150‑1 (MQ=255) aTGGACGTTTACTTTTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGttt < 1:903245/143‑1 (MQ=255) aTGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGttt > 2:903245/1‑143 (MQ=255) aTGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCa > 2:302813/1‑150 (MQ=255) aTGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCa > 2:676018/1‑150 (MQ=255) tGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCt > 1:1270875/1‑122 (MQ=255) tGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCt < 2:1270875/122‑1 (MQ=255) ggACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCgggg < 1:1326253/101‑1 (MQ=255) ggACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCgggg > 2:1326253/1‑101 (MQ=255) ggACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAgg > 2:1122750/1‑150 (MQ=255) ttACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGttt < 1:146286/150‑1 (MQ=255) tACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGttt < 1:1459883/149‑1 (MQ=255) tACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGttt > 2:1459883/1‑149 (MQ=255) aCTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGTTTGt > 1:521142/1‑150 (MQ=255) cTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGTTTGTa < 1:676018/150‑1 (MQ=255) gTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGTTTGTACGa < 1:1645575/150‑1 (MQ=255) tCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGTTTGTATGAt > 1:1402702/1‑150 (MQ=255) | AGGAAGCTGTTGATCGGGGCCAGGAAGCTGGAGTGGTCGCCCAGCTGCCGAGTCAGCTTGTGGCGAACCCGACCGCGCAGGTGAACATAGGCGATCGAGAAGACGAAGATAAGTACGAGTGCAATTTTCATGGACGTTTACTTGTCGAAAAATGGCCATGCGCCGAGGCATGAGCCCGCCAGCATAAACAATCATGGGGGCAGTTTGTACTTATTGTTATGAAACTGCGGGGCGACATTGGTGTAATACCCTACCGTCTTGCGCAAACGTTTCATGTCAGGGAGTTTGTATGAT > NC_002947/2771055‑2771348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |