Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,845,973 C→A 6.1% S62S (TCG→TCT)  PP_2497 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,845,9730CA 6.1% 210.9 / 3.3 66S62S (TCG→TCT) PP_2497hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (35/27);  new base A (2/2);  total (37/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.44e-01

CGGATCAGGCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCATGGCGTGATGGAA  >  NC_002947/2845825‑2846113
                                                                                                                                                    |                                                                                                                                             
cGGATCAGGCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATAccg                                                                                                                                              >  2:278884/1‑150 (MQ=255)
  gATCAGGCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATAccgag                                                                                                                                            <  2:1600779/150‑1 (MQ=255)
    tCAGGCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATAccgagcc                                                                                                                                          <  2:458458/150‑1 (MQ=255)
      aGGCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATAccgagccga                                                                                                                                        <  1:809716/150‑1 (MQ=255)
        gCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAgg                                                                                                                                      >  2:987497/1‑150 (MQ=255)
        gCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAgg                                                                                                                                      >  1:1462773/1‑150 (MQ=255)
         ccGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAggg                                                                                                                                     <  1:278884/150‑1 (MQ=255)
             cAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGAt                                                                                                                                 <  2:994144/150‑1 (MQ=255)
                      gCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGGGATGCCGACAgg                                                                                                                        >  2:53383/1‑150 (MQ=255)
                         gTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGcc                                                                                                                     >  1:1565765/1‑150 (MQ=255)
                         gTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACAGAGCCGAGGGTGATGCCGACAGGGcc                                                                                                                     >  2:252858/1‑150 (MQ=255)
                         gTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACAGAGCCGAGGGTGATGCCGACAGGGcc                                                                                                                     >  2:252913/1‑150 (MQ=255)
                             ccACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCg                                                                                                                 >  1:248342/1‑150 (MQ=255)
                              cacaGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGa                                                                                                                >  2:1589050/1‑150 (MQ=255)
                                caGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCACCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGAtt                                                                                                              >  2:583067/1‑150 (MQ=255)
                                 agagTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTa                                                                                                             <  2:1511052/150‑1 (MQ=255)
                                 agagTAGGCAGAGGTTGTGGGCCAGGACAGGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTa                                                                                                             <  1:414993/150‑1 (MQ=255)
                                     tAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGcc                                                                                                         <  2:1565765/150‑1 (MQ=255)
                                       ggCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGAGGCAATCGCACAAGCACCGACTCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGa                                                                                                       >  1:1265974/1‑150 (MQ=255)
                                           gagGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCACGAGTGATGCCGACAGGGCCGGCGATTAGGCCGAGtgc                                                                                                   >  1:1319780/1‑150 (MQ=255)
                                            agGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGtgct                                                                                                  <  1:987497/150‑1 (MQ=255)
                                              gTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGtgctgc                                                                                                >  1:1302024/1‑150 (MQ=255)
                                                         ggACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTgc                                                                                    <  1:575277/150‑1 (MQ=255)
                                                          gACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTgcc                                                                                   >  2:1629226/1‑150 (MQ=255)
                                                               gACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTg                                                                              >  1:1023948/1‑150 (MQ=255)
                                                                aCGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGc                                                                             >  2:490139/1‑150 (MQ=255)
                                                                    tCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCaga                                                                         <  2:1302024/150‑1 (MQ=255)
                                                                     ccAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACAGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCagag                                                                        <  1:252913/150‑1 (MQ=255)
                                                                     ccAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACAGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCagag                                                                        <  1:252858/150‑1 (MQ=255)
                                                                      cAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGagc                                                                       <  2:848195/150‑1 (MQ=255)
                                                                      cAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGagc                                                                       >  1:134647/1‑150 (MQ=255)
                                                                       aGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGagca                                                                      >  1:1340583/1‑150 (MQ=255)
                                                                             tCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTg                                                                                     <  1:1176719/129‑1 (MQ=255)
                                                                             tCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTg                                                                                     >  2:1176719/1‑129 (MQ=255)
                                                                               gCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGAc                                                              <  2:374384/150‑1 (MQ=255)
                                                                                  gAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCCAAGAAGCACTGACGcc                                                           >  2:780581/1‑150 (MQ=255)
                                                                                  gAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGcc                                                           >  2:282343/1‑150 (MQ=255)
                                                                                        cgcgcCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCAGGGGCTTCGGCAACATGAAGCAC‑GCGCTTTTCCGCGTGCTGGAGGAGCGCTGACGTCACGTGc                                                     <  2:16644/150‑1 (MQ=255)
                                                                                         gcgcCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGATTTTTTCGGAGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCg                                                    >  1:1263867/1‑150 (MQ=255)
                                                                                          cgcCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGa                                                   <  1:1448868/150‑1 (MQ=255)
                                                                                          cgcCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCG‑GTGCAGCACTCGGCCt                                                                                       >  1:972390/1‑114 (MQ=255)
                                                                                          cgcCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCG‑GTGCAGCACTCGGCCt                                                                                       <  2:972390/114‑1 (MQ=255)
                                                                                              aaTCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCagag                                                                        >  1:1485752/1‑125 (MQ=255)
                                                                                              aaTCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCagag                                                                        <  2:1485752/125‑1 (MQ=255)
                                                                                               aTCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCt                                              >  1:1499886/1‑150 (MQ=255)
                                                                                                      aaCCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATAccgagcc                                                                                                                                          >  2:763780/1‑52 (MQ=255)
                                                                                                      aaCCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATAccgagcc                                                                                                                                          <  1:763780/52‑1 (MQ=255)
                                                                                                      aaCCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAg                                       >  2:1467469/1‑150 (MQ=255)
                                                                                                          accGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGGGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGcc                                   >  2:1090030/1‑150 (MQ=255)
                                                                                                          accGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGcc                                   >  2:749544/1‑150 (MQ=255)
                                                                                                           ccGACGCTTCCGGCCAGGCCGCCGATAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCg                                  >  2:1335858/1‑150 (MQ=255)
                                                                                                            cGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGa                                 <  1:1402686/150‑1 (MQ=255)
                                                                                                              aCGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGt                                                                                                     >  1:99716/1‑81 (MQ=255)
                                                                                                              aCGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGt                                                                                                     <  2:99716/81‑1 (MQ=255)
                                                                                                              aCGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGGCGATg                               >  1:1098197/1‑150 (MQ=255)
                                                                                                                     cGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCa                                                                           >  2:1618760/1‑99 (MQ=255)
                                                                                                                     cGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCa                                                                           <  1:1618760/99‑1 (MQ=255)
                                                                                                                      ggCCAGGCCGCCGAGAATGGCGACGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGcc                       <  2:1319780/150‑1 (MQ=255)
                                                                                                                       gCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCg                      >  1:611605/1‑150 (MQ=255)
                                                                                                                        ccAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCgg                     <  2:1462773/150‑1 (MQ=255)
                                                                                                                        ccAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCgg                     <  1:678784/150‑1 (MQ=255)
                                                                                                                          aGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGtgctg                                                                                                 <  2:1417740/73‑1 (MQ=255)
                                                                                                                          aGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGtgctg                                                                                                 >  1:1417740/1‑73 (MQ=255)
                                                                                                                              cgccgAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCa               >  1:469283/1‑150 (MQ=255)
                                                                                                                               gccgAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCAt              >  1:1497736/1‑150 (MQ=255)
                                                                                                                               gccgAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCAt              <  1:572349/150‑1 (MQ=255)
                                                                                                                                ccgAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCATg             <  2:611605/150‑1 (MQ=255)
                                                                                                                                 cgAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGAt                                <  2:1219339/130‑1 (MQ=255)
                                                                                                                                 cgAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGAt                                >  1:1219339/1‑130 (MQ=255)
                                                                                                                                      aTGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCATGGCGTGa       >  2:1001877/1‑150 (MQ=255)
                                                                                                                                       tGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCATGGCGTGAt      <  1:309469/150‑1 (MQ=255)
                                                                                                                                           gcCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCATGGCGTGATGGaa  <  1:490139/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
CGGATCAGGCCGGCAGGTTGAAGCGGTGACCACAGAGTAGGCAGAGGTTGTGGGCCAGGACATGACGGTCCAGCGACTCGCCGAGCTGCGCGCCAATCGCACAACCACCGACGCTTCCGGCCAGGCCGCCGAGAATGGCGCCGGATACCGAGCCGAGGGTGATGCCGACAGGGCCGGCGATTAGGCCGAGTGCTGCAC‑CGGCCTTGCCGCCTGCCAGAGCAGCGCTGACGCCACGTGCGAGGCCTCCGACAGCGCCGATGGCCGCGCCGGCTTTCATGGCGTGATGGAA  >  NC_002947/2845825‑2846113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑