Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,493,695 A→C 7.0% L184R (CTG→CGG)  PP_3097 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,493,6950AC 7.0% 202.1 / 6.3 71L184R (CTG→CGG) PP_3097hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (32/34);  new base C (3/2);  total (35/36)
Fisher's exact test for biased strand distribution p-value = 6.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.48e-01

AGCCCACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCA  >  NC_002947/3493546‑3493840
                                                                                                                                                     |                                                                                                                                                 
aGCCCACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCa                                                                                                                                                   <  2:485654/150‑1 (MQ=255)
  cccACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCCgg                                                                                                                                                 <  2:1511077/150‑1 (MQ=255)
  cccAAGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGGAGCTCAGCGTGGCCTTGGCGAGGGCGTTGAACAGCAGATCGTACAGCTGCAGCATCAGGGTGGCGTCGCAGTCGGAGAATAAGCGCAgg                                                                                                                                                 >  2:562249/1‑150 (MQ=255)
   ccACGGTTTTCAGGGCATCGGCCTTCAGCTCCACCTCGCGTCTGCGGCCCTGGTCGTCTAAGCTCAGCGTGGCCTTTGCGAGGTTGTTGAACATCAGTTCGTACAGCTTTAGCATCAGGGTCGCTTCGCCGTCTAGGAATAACCGTAGGc                                                                                                                                                <  2:1156754/150‑1 (MQ=255)
    cACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCg                                                                                                                                               >  2:582928/1‑150 (MQ=255)
      cGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCCTGCGGt                                                                                                                                             >  2:236017/1‑150 (MQ=255)
          tttCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCg                                                                                                                                               <  1:1057275/144‑1 (MQ=255)
          tttCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCg                                                                                                                                               >  2:1057275/1‑144 (MQ=255)
          tttCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTcct                                                                                                                                         <  1:1355430/150‑3 (MQ=255)
          tttCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCAt                                                                                                                                         >  1:711078/1‑150 (MQ=255)
           ttCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCCTGCGGTTcttc                                                                                                                                        <  1:236017/150‑4 (MQ=255)
            tCAGGGCATCGGCCGACAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGt                                                                                                                                       <  2:1143225/150‑1 (MQ=255)
                                  cACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATc                                                                                                                 <  1:827817/150‑1 (MQ=255)
                                   aCCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATcc                                                                                                                >  1:664543/1‑149 (MQ=255)
                                          ggCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTgg                                                                                                         <  1:712384/150‑1 (MQ=255)
                                            cTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCt                                                                                                       <  1:1529076/150‑1 (MQ=255)
                                                  cccTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAgg                                                                                                 >  1:43808/1‑150 (MQ=255)
                                                   ccTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGc                                                                                                >  2:1401313/1‑150 (MQ=255)
                                                   ccTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGc                                                                                                <  2:1248195/150‑1 (MQ=255)
                                                            cgAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAgg                                                                                                                      <  2:1244226/119‑1 (MQ=255)
                                                            cgAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAgg                                                                                                                      >  1:1244226/1‑119 (MQ=255)
                                                               aGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGAc                                                                                    <  1:269876/150‑1 (MQ=255)
                                                                         ggCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAg                                                                          <  1:854432/150‑1 (MQ=255)
                                                                            cTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGAt                                                                                            >  2:788579/1‑129 (MQ=255)
                                                                            cTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGAt                                                                                            <  1:788579/129‑1 (MQ=255)
                                                                             ttGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCg                                                                      >  1:1521705/1‑150 (MQ=255)
                                                                                     gttgttGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCa                                                                                                             <  1:732279/103‑1 (MQ=255)
                                                                                     gttgttGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCa                                                                                                             >  2:732279/1‑103 (MQ=255)
                                                                                     gttgttGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCg                                                                                               <  1:1528850/117‑1 (MQ=255)
                                                                                     gttgttGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCg                                                                                               >  2:1528850/1‑117 (MQ=255)
                                                                                            aaCAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTg                                                       >  2:242437/1‑150 (MQ=255)
                                                                                             aCAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGt                                                                                                                                             <  1:499373/63‑1 (MQ=255)
                                                                                             aCAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGt                                                                                                                                             >  2:499373/1‑63 (MQ=255)
                                                                                             aCAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAgg                                                                                                                      >  2:291051/1‑86 (MQ=255)
                                                                                             aCAGCAGTTCGTACAGCTGCAGCATCAGGGGCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAgg                                                                                                                      <  1:291051/86‑1 (MQ=255)
                                                                                                 cagTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGc                                                  <  2:1521705/150‑1 (MQ=255)
                                                                                                   gTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCtgt                                                               <  1:41293/135‑1 (MQ=255)
                                                                                                   gTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCtgt                                                               <  1:41292/135‑1 (MQ=255)
                                                                                                   gTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCtgt                                                               >  2:41292/1‑135 (MQ=255)
                                                                                                   gTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCtgt                                                               >  2:41293/1‑135 (MQ=255)
                                                                                                    ttCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGa                                               <  1:422119/150‑1 (MQ=255)
                                                                                                        tgcAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGt                                           >  2:239383/3‑150 (MQ=255)
                                                                                                         aCAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAATGCCGAGCGtg                                          <  2:1425649/150‑2 (MQ=255)
                                                                                                            gCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCa                                       <  1:562249/150‑1 (MQ=255)
                                                                                                             cTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAg                                                                                      <  2:1643961/102‑1 (MQ=255)
                                                                                                             cTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAg                                                                                      >  1:1643961/1‑102 (MQ=255)
                                                                                                              tGCAGCATCAGGGTCGCTTAACCGTCGAGGAAGAACCGCAGGCGGGTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCAtt                                     >  2:558434/1‑150 (MQ=255)
                                                                                                                     tCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGa                              >  2:1627796/1‑150 (MQ=255)
                                                                                                                       aGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAAc                            <  1:1242371/150‑1 (MQ=255)
                                                                                                                         ggTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGa                          >  2:1598238/1‑150 (MQ=255)
                                                                                                                            cGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGNGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGc                       <  1:1461604/150‑1 (MQ=255)
                                                                                                                                    cGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGc                                                                                                <  1:207230/69‑1 (MQ=255)
                                                                                                                                    cGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGc                                                                                                >  2:207230/1‑69 (MQ=255)
                                                                                                                                    cGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGtt                                          >  2:6035/1‑123 (MQ=255)
                                                                                                                                    cGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGtt                                          <  1:6035/123‑1 (MQ=255)
                                                                                                                                     gTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAAAAGGGCACCGCAAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCAc              <  1:1601633/150‑1 (MQ=255)
                                                                                                                                        gAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGc           >  2:375984/1‑150 (MQ=255)
                                                                                                                                         gacatgaaCCGCCTGCGGTTCTTGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCa          >  2:1475360/6‑150 (MQ=255)
                                                                                                                                         gacatgaaCCGCCTGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCa          >  1:1229324/6‑150 (MQ=255)
                                                                                                                                          ggAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGa                                                      >  1:1195619/1‑105 (MQ=255)
                                                                                                                                          ggAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGa                                                      <  2:1195619/105‑1 (MQ=255)
                                                                                                                                          ggAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGa                          >  2:1379753/1‑133 (MQ=255)
                                                                                                                                          ggAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGa                          <  1:1379753/133‑1 (MQ=255)
                                                                                                                                           gaagaaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGTCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAAt        >  2:378752/1‑150 (MQ=255)
                                                                                                                                           gaagaaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAg                         <  1:977087/133‑1 (MQ=255)
                                                                                                                                           gaagaaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAg                         >  2:977087/1‑133 (MQ=255)
                                                                                                                                           gaagaaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCact        >  2:780208/1‑148 (MQ=255)
                                                                                                                                           gaagaaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAAt        >  2:1047559/1‑150 (MQ=255)
                                                                                                                                               aaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGc    <  2:43808/150‑1 (MQ=255)
                                                                                                                                               aaCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGc    <  1:242437/150‑1 (MQ=255)
                                                                                                                                                 ccGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCca  >  1:1022826/1‑150 (MQ=255)
                                                                                                                                                 ccGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCca  <  2:711078/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
AGCCCACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCA  >  NC_002947/3493546‑3493840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑