| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,599,764 | G→C | 6.6% | intergenic (‑17/+149) | PP_3175 ← / ← PP_3176 | ferredoxin reductase dioxygenase subunit/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,599,764 | 0 | G | C | 6.6% | 291.9 / 10.6 | 93 | intergenic (‑17/+149) | PP_3175/PP_3176 | ferredoxin reductase dioxygenase subunit/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base G (43/42); new base C (4/2); total (48/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.05e-01 | |||||||||||
AGTTGCCTTGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCGAATGCC > NC_002947/3599621‑3599912 | aGTTGCCTTGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCttt < 1:948780/150‑1 (MQ=255) gCCTTGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGaa > 2:897134/1‑150 (MQ=255) ccTTGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAAc < 2:1068098/150‑1 (MQ=255) cTTGATAAGCGTGTAGCTGCTCCCCTTGGCGGACGAGGGTGAGCTATTCGCTACCGGCCTGCACGCGCAAGGGGAGGTGTTCGTCGAGCTGGGCCCAGCGTGCCACGGCGTACTCGGACATGGGGCTTCTCCAAAGGGGCCTTTGGCAcc > 2:198895/1‑150 (MQ=255) cTTGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAAcc > 1:1137986/1‑150 (MQ=255) cTTGATAAGCGTGTACCTGCGCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAAcc < 1:1335729/150‑1 (MQ=255) ttGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGCCCCTTTGGagaag < 2:231554/150‑5 (MQ=255) ttGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGCCCCTTTGGagaag > 1:231554/1‑146 (MQ=255) cGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGc < 2:1154578/150‑1 (MQ=255) tGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCg > 1:698160/1‑150 (MQ=255) tCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGa > 1:1396698/1‑150 (MQ=255) ccTTTGCGGACTAGGATGATTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCAGAGGTTGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAgg < 1:107951/150‑1 (MQ=255) cTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAggg > 1:930276/1‑150 (MQ=255) ttGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAgggg < 1:375383/150‑1 (MQ=255) cGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGc > 1:51469/1‑150 (MQ=255) ggACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCg > 1:224273/1‑150 (MQ=255) ggACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCg > 1:223734/1‑150 (MQ=255) gACGAGGATGAGTTCTTCGCTACCGGCCTGCACGGGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGCGTCATGGCGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGTCGGGAAGCGGATGCGt < 2:932356/150‑1 (MQ=255) gACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGt > 2:1020276/1‑150 (MQ=255) gACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGt > 2:857565/1‑150 (MQ=255) aCGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCATTTGGAACTATTTGTCTCCTGGGGCGGGAAGGGGATGCGtt > 2:178798/1‑150 (MQ=255) cGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTg > 2:1268006/1‑150 (MQ=255) gAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGa < 2:1474894/150‑1 (MQ=255) ggATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGc > 1:71482/1‑150 (MQ=255) tGAGTTCTTCGCTACCGGCCTGCACGCGCAGGTGGCGGTGTTCGTCGAGCTGGGCCAAGGGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATGTGAGGCGTGGGGCGGGAAGGGGATGCGTTGAGCTGa > 2:196835/1‑150 (MQ=255) tGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGa > 2:1016738/1‑150 (MQ=255) aGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACg > 1:295436/1‑150 (MQ=255) cttcGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTGGACGCCTGGGGCGGGAAGGGGCTGCGTTGAGCTCACGagtg > 2:349044/1‑147 (MQ=255) ttcGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCgg > 2:1266863/1‑150 (MQ=255) cTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGACAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGa < 1:178798/150‑1 (MQ=255) tACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAg < 2:698160/150‑1 (MQ=255) aCCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAgg < 1:857565/150‑1 (MQ=255) cGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgt < 1:112928/150‑1 (MQ=255) cGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgt > 1:1101747/1‑150 (MQ=255) cGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgt > 2:1333200/1‑150 (MQ=255) cGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgt > 1:1344952/1‑150 (MQ=255) aCGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGCGGGTGTGG‑ATtg > 1:652266/1‑150 (MQ=255) cgcgCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATtgg < 2:1101747/150‑1 (MQ=255) gcgcAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATtggg < 2:1137986/150‑1 (MQ=255) cAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATtgggtgg < 2:295436/150‑1 (MQ=255) cGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCAt < 1:1333200/150‑1 (MQ=255) ggTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCAtt < 1:1261934/150‑1 (MQ=255) ggTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCAtt < 2:1091258/150‑1 (MQ=255) tgtTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGTCTGGGGCTGGAACGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGc < 1:198895/150‑1 (MQ=255) gtTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCa < 2:930276/150‑1 (MQ=255) gtcgAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCt > 1:39527/1‑150 (MQ=255) tcgAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCtt < 2:1396698/150‑1 (MQ=255) gggCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑a < 1:422772/119‑1 (MQ=255) gggCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑a > 2:422772/1‑119 (MQ=255) gCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAg > 2:855066/1‑150 (MQ=255) cGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAgg > 2:1558361/1‑150 (MQ=255) gCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGc > 2:1521087/1‑78 (MQ=255) gCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGc < 1:1521087/78‑1 (MQ=255) cACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAgggg > 2:1621969/1‑72 (MQ=255) cACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGa < 1:1558361/150‑1 (MQ=255) cACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGa > 2:1066331/1‑150 (MQ=255) cACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGAAGCCTGGGGCGGGAAgggg < 1:1621969/72‑1 (MQ=255) aCGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGATTCGCTGACGATC‑ATCGAGGCGGTGGTATTGGGTGGGTTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGaa < 1:1020276/150‑1 (MQ=255) gTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgtgt < 2:1037096/97‑1 (MQ=255) gTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgtgt > 1:1037096/1‑97 (MQ=255) gTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgtgt < 2:1451002/97‑1 (MQ=255) gTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGgtgt > 1:1451002/1‑97 (MQ=255) gTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCt > 2:1401149/1‑150 (MQ=255) aCTGGGTCATGGGGCTTCTCCAAAGTTGCCTTTGGAACCATTTGACGCCTGGGACGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTACATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCtgt < 1:1572512/150‑1 (MQ=255) aCTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCtgt < 1:1066331/150‑1 (MQ=255) tGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTgg > 2:914969/1‑150 (MQ=255) gggTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGT‑GGTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCACAGGTTTTCAAGCCTATggg < 2:223734/150‑1 (MQ=255) tCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGt < 2:39527/150‑1 (MQ=255) aTGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGTTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTgg < 1:196835/150‑1 (MQ=255) aTGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTgg < 1:1016738/150‑1 (MQ=255) aTGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTgg < 1:187424/150‑1 (MQ=255) aTGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGCGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTgg < 2:1059191/150‑1 (MQ=255) gggCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGa > 1:421209/1‑131 (MQ=255) gggCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGa < 2:421209/131‑1 (MQ=255) gCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGccc < 2:203002/113‑1 (MQ=255) gCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGccc > 1:203002/1‑113 (MQ=255) ttcCAAAGGCCCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCa < 1:814133/94‑1 (MQ=255) ttcCAAAGGCCCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCa > 2:814133/2‑95 (MQ=255) tcCAAAGGTGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGc > 2:1247905/1‑150 (MQ=255) tcCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTg > 2:903247/1‑105 (MQ=255) tcCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTg < 1:903247/105‑1 (MQ=255) ccAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCAtt < 2:1474244/95‑1 (MQ=255) ccAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCAtt > 1:1474244/1‑95 (MQ=255) ccAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGc < 1:2175/149‑1 (MQ=255) ccAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGc > 2:2175/1‑149 (MQ=255) ccAAAGGCCCCTTTGGAGCCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGAGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCg > 2:1343989/1‑150 (MQ=255) ccAAAGGCCCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCg > 1:821654/1‑150 (MQ=255) cAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAAc > 1:140409/1‑126 (MQ=255) cAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAAc < 2:140409/126‑1 (MQ=255) cAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCGa > 1:160992/1‑150 (MQ=255) cAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCGa > 1:1357441/1‑150 (MQ=255) cAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGGGGGAGTGGGCAATCCGGCGa > 1:796360/1‑150 (MQ=255) aaaGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCGaa < 2:1344952/150‑1 (MQ=255) ggggCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCGAATGc < 1:1268006/150‑1 (MQ=255) gggCCTTTGGAAGCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGGGGCGGGTGTGG‑AGTGGGGGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTGGAAAACCTGTGGGAGCGGGCAATCCGGCGAATGcc > 2:28981/1‑150 (MQ=255) | AGTTGCCTTGATAAGCGTGTACCTGCTCCCCTTGGCGGACGAGGATGAGTTCTTCGCTACCGGCCTGCACGCGCAGGGGGCGGTGTTCGTCGAGCTGGGCCAAGCGGGCCACGGCGTACTGGGTCATGGGGCTTCTCCAAAGGGGCCTTTGGAACCATTTGACGCCTGGGGCGGGAAGGGGATGCGTTGAGCTGACGATCGGTGGAGGGTGTGG‑ATTGGGTGGGCTTCATTGCAGGCTTGCCCGCGCCCATAGGCTTGAAAACCTGTGGGAGTGGGCAATCCGGCGAATGCC > NC_002947/3599621‑3599912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |