Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,632,134 C→T 6.0% L329L (CTG→TTG)  PP_5590 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,632,1340CT 6.0% 203.1 / 2.6 67L329L (CTG→TTG) PP_5590hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (28/35);  new base T (2/2);  total (30/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01

CGGCCACCGCCGGCGTCATGAGCTTCGATGAGCTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCTGGGCTG  >  NC_002947/3631988‑3632275
                                                                                                                                                  |                                                                                                                                             
cGGCCACCGCCGGCGTCATGAGCTTCGATGAGCTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCgctgc                                                                                                                                            <  2:631972/150‑1 (MQ=255)
  gCCACCGCCGGCGTCATTAGCTTCGATGAGCTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGctgctg                                                                                                                                          <  1:556022/150‑1 (MQ=255)
      tggccgGGGTCGTGAGCTTCGATGAGCTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGccc                                                                                                                                      <  2:411678/148‑1 (MQ=255)
      tggccgGGGTCGTGAGCTTCGATGAGCTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGccc                                                                                                                                      <  2:411591/148‑1 (MQ=255)
              gTCATGAGCTTCGATGAGCTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACACCGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCAc                                                                                                                              <  1:395889/150‑1 (MQ=255)
                                cTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATc                                                                                                            >  1:1182710/1‑150 (MQ=255)
                                         ttCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGTTGTTCACGGCCAGCAACGCCTAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAg                                                                                                   <  2:682384/150‑1 (MQ=255)
                                           cAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCGGGAgaac                                                                                                <  2:171987/150‑4 (MQ=255)
                                            aaCGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTg                                                                                                >  2:1389458/1‑150 (MQ=255)
                                            aaCGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTg                                                                                                >  2:369570/1‑150 (MQ=255)
                                            aaCGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTg                                                                                                >  1:58605/1‑150 (MQ=255)
                                            aaCGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGGGCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTg                                                                                                >  1:1342993/1‑150 (MQ=255)
                                                 tCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCg                                                                                           >  2:975946/1‑150 (MQ=255)
                                                    ccTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgt                                                                                        <  1:369570/150‑1 (MQ=255)
                                                    ccTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgt                                                                                        <  2:1047730/150‑1 (MQ=255)
                                                     cTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtg                                                                                       <  2:784335/150‑1 (MQ=255)
                                                     cTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtg                                                                                       >  2:1294367/1‑150 (MQ=255)
                                                        gACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      <  1:1315460/148‑1 (MQ=255)
                                                        gACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      >  2:1315460/1‑148 (MQ=255)
                                                            gCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTgtgggtgg                                                                                >  2:815316/1‑150 (MQ=255)
                                                               tCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGtggtgg                                                                             <  1:975946/150‑1 (MQ=255)
                                                                cGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGa                                                                            <  1:304466/150‑1 (MQ=255)
                                                                   gTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGcc                                                                                                               <  1:310044/112‑1 (MQ=255)
                                                                   gTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGcc                                                                                                               >  2:310044/1‑112 (MQ=255)
                                                                      gAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAGCGCCTCGGCGTTGCTGGcg                                                                                                                                       >  2:1364213/1‑84 (MQ=37)
                                                                      gAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAGCGCCTCGGCGTTGCTGGcg                                                                                                                                       <  1:1364213/85‑2 (MQ=37)
                                                                        aGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCTATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGc                                                                    <  2:281277/150‑1 (MQ=255)
                                                                              tggGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTgaaga                                                              >  2:871638/1‑150 (MQ=255)
                                                                                 gCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCTAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATg                                                           <  1:430966/150‑1 (MQ=255)
                                                                                 gCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATg                                                           <  1:871638/150‑1 (MQ=255)
                                                                                 gCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATg                                                           <  2:1182710/150‑1 (MQ=255)
                                                                                  cAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtg                                                                                         >  2:210880/1‑119 (MQ=255)
                                                                                  cAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtg                                                                                         <  1:210880/119‑1 (MQ=255)
                                                                                  cAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATgg                                                          <  2:109003/150‑1 (MQ=255)
                                                                                   aagaagGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGa                                                                                                    >  2:1514421/1‑107 (MQ=255)
                                                                                   aagaagGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGa                                                                                                    <  1:1514421/107‑1 (MQ=255)
                                                                                      aagGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAg                                                      >  2:1404499/1‑150 (MQ=255)
                                                                                       agGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      >  1:711753/1‑117 (MQ=255)
                                                                                       agGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      <  2:711753/117‑1 (MQ=255)
                                                                                       agGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAgc                                                     >  1:748088/1‑150 (MQ=255)
                                                                                         gagaTGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAgcgc                                                   <  1:103207/150‑1 (MQ=255)
                                                                                                aCATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      >  2:1205245/1‑108 (MQ=255)
                                                                                                aCATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      <  1:1205245/108‑1 (MQ=255)
                                                                                                  aTCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATg                                          >  1:1300442/1‑150 (MQ=255)
                                                                                                      ccTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGcc                                        <  1:641400/148‑1 (MQ=255)
                                                                                                      ccTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGcc                                        >  2:641400/1‑148 (MQ=255)
                                                                                                         aCAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGCGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCTATGTGATGCCGCGTa                                   >  2:1140400/1‑150 (MQ=255)
                                                                                                              gCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAAt                                                            <  1:236978/120‑1 (MQ=255)
                                                                                                              gCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAAt                                                            >  2:236978/1‑120 (MQ=255)
                                                                                                                    aaGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCa                                >  1:1643775/1‑142 (MQ=255)
                                                                                                                    aaGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCa                                <  2:1643775/142‑1 (MQ=255)
                                                                                                                      ggTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      <  1:1379815/86‑1 (MQ=255)
                                                                                                                      ggTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgtgt                                                                                      >  2:1379815/1‑86 (MQ=255)
                                                                                                                         gtTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGCGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTcga                   <  1:1140400/150‑1 (MQ=255)
                                                                                                                          ttCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTcgac                  <  1:1389458/150‑1 (MQ=255)
                                                                                                                            cACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTcgacga                <  2:1160791/150‑1 (MQ=255)
                                                                                                                             aCCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgt                                                                                        <  1:679564/77‑1 (MQ=255)
                                                                                                                             aCCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCgtgt                                                                                        >  2:679564/1‑77 (MQ=255)
                                                                                                                             aCCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGcc                                        <  1:1641798/125‑1 (MQ=255)
                                                                                                                             aCCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGcc                                        >  2:1641798/1‑125 (MQ=255)
                                                                                                                             aCCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGaa               <  2:1342993/150‑1 (MQ=255)
                                                                                                                              ttcccAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAg              >  1:1135603/4‑150 (MQ=255)
                                                                                                                                gCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCAc                               >  2:604240/1‑131 (MQ=255)
                                                                                                                                gCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCAc                               <  1:604240/131‑1 (MQ=255)
                                                                                                                                 ccAGCAGCGCCTCGGCGTTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATg                                                           >  2:1404765/1‑102 (MQ=255)
                                                                                                                                 ccAGCAGCGCCTCGGCGTTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATg                                                           <  1:1404765/102‑1 (MQ=255)
                                                                                                                                     cAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGtggtgg                                                                             <  1:1181035/80‑1 (MQ=255)
                                                                                                                                     cAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGtggtgg                                                                             >  2:1181035/1‑80 (MQ=255)
                                                                                                                                          ccGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCTGGGCTg  <  1:815316/150‑1 (MQ=255)
                                                                                                                                                  ctgctgGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCtactac                        <  2:1067432/120‑1 (MQ=255)
                                                                                                                                                  ctgctgGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCtactac                        >  1:1067432/1‑120 (MQ=255)
                                                                                                                                                  |                                                                                                                                             
CGGCCACCGCCGGCGTCATGAGCTTCGATGAGCTGTACGTGTTCAACGGTCGCCTCGACCGCTTCGAGTGGAAGCTGGTGGGCAAGAAGGAGATGTACATCCCCTACAACGCCAACAAGGTGTTCACCGCCAGCAACGCCGAGGCGCTGCTGGCCCCCCATCACCTGAACCCCGACGCCATCCGCTGGGAGCTGCACCGTGTGTGGGTGGTGGAGGCGACGCTGAAGAATGGCCAGCGCCATGTGATGCCGCGTAGCACCTACTACCTCGACGAAGACACCTGGGCTG  >  NC_002947/3631988‑3632275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: