Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,799,429 | T→C | 6.2% | V97A (GTG→GCG) | PP_3359 → | hydroxycinnamic acid degradation regulator |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,799,429 | 0 | T | C | 6.2% | 192.9 / 2.3 | 64 | V97A (GTG→GCG) | PP_3359 | hydroxycinnamic acid degradation regulator |
Reads supporting (aligned to +/- strand): ref base T (28/32); new base C (2/2); total (30/34) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 |
CCATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGATGACGAAAGGACTGAA > NC_002947/3799280‑3799574 | ccATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCc‑gt > 1:1324585/1‑150 (MQ=255) ccATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCc‑gt > 1:578854/1‑150 (MQ=255) tGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTgcg < 1:479920‑M2/150‑4 (MQ=255) cTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCc‑gtgcgcgtg > 2:1518591/1‑150 (MQ=255) cAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCg < 1:513246/150‑1 (MQ=255) aaTTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCgg > 1:1181240/1‑150 (MQ=255) ttCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACaa < 2:629968/150‑1 (MQ=255) ttCCGCCCTGCCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACaa < 2:901558/150‑1 (MQ=255) cGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAgcg < 1:1342852/150‑1 (MQ=255) cTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCACGGCCA‑GCgcgcgctcttccagtttgttcagcattgg < 1:899664‑M2/148‑30 (MQ=255) cTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCAC‑GGCCAGCgcgcgctcttccagtttgttcagcattgg > 2:899664‑M2/1‑119 (MQ=255) tGGCGATCATAAAGATGAGCCCCGGGCCGAGACCTGCCCACCTGGCGCGTGCGTTGTCAATCGCCCCCCCGCAAGTAGTGCCAATGCTTAACAGACTGGAAGAGCGCGCGCGGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGt < 2:300282/150‑1 (MQ=255) tcatcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAAGGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGa > 1:108089/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCCATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 1:31589/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 2:1366626/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 1:381576/1‑150 (MQ=255) tcGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGAttt > 1:180439/1‑150 (MQ=255) ccAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt < 2:381576/150‑1 (MQ=255) ccAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt > 2:970330/1‑150 (MQ=255) ccAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt < 1:1366626/150‑1 (MQ=255) gAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAg < 2:1181240/150‑1 (MQ=255) gAACACCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAg > 2:533979/1‑150 (MQ=255) aTGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAg < 2:578854/150‑1 (MQ=255) tGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAgg > 1:1516186/1‑150 (MQ=255) gCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑c > 2:223235/1‑150 (MQ=255) ggCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑cc > 2:1389159/1‑148 (MQ=255) ggCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑cc < 1:1389159/148‑1 (MQ=255) gCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCt < 1:751690/149‑1 (MQ=255) gCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCt > 2:751690/1‑149 (MQ=255) cgcgTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGt < 2:1069192/150‑1 (MQ=255) tgcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCACGGCCA‑GCgcgcgctcttccagtttgtt < 1:885419‑M2/89‑21 (MQ=255) tgcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCACGGCCA‑GCgcgcgctcttccagtttgtt > 2:885419‑M2/1‑69 (MQ=255) gcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAACTCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAg < 1:1311802/150‑1 (MQ=255) gcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAg < 1:1143742/150‑1 (MQ=255) gcgtTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAg < 1:1143743/150‑1 (MQ=255) ttGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGcac < 2:689619/150‑1 (MQ=255) tGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGcaca > 1:1214575/1‑150 (MQ=255) cAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATcg > 1:1497519/1‑150 (MQ=255) aaTCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAATCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGTAGTTGAAGGACATcgc > 1:516169/1‑150 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAgcgc < 1:1521951/81‑1 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAgcgc > 2:1521951/1‑81 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt < 2:1582983/98‑1 (MQ=255) cccccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCt > 1:1582983/1‑98 (MQ=255) cccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGc < 1:1526545/134‑1 (MQ=255) cccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGc > 2:1526545/1‑134 (MQ=255) ccGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGc > 2:1152890/1‑150 (MQ=255) gTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAg > 1:841873/1‑150 (MQ=255) gCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGc < 2:841873/150‑1 (MQ=255) aaTGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGa > 1:280180/1‑132 (MQ=255) aaTGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGa < 2:280180/132‑1 (MQ=255) aaTGCGGACCAAACTGGAAGAGCGCTCGCTGGCC‑GTTCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGATCAAATCGGGCTAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGAc < 2:702414/150‑1 (MQ=255) gCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATc < 2:1214575/150‑1 (MQ=255) cTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTAt < 2:1072982/66‑1 (MQ=255) cTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTAt > 1:1072982/1‑66 (MQ=255) tGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGTCGACAGCGATCACCAGGCGACATCCa > 2:1362272/1‑150 (MQ=255) aaCAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAAc > 2:617887/1‑150 (MQ=255) aaCAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAAc < 1:970330/150‑1 (MQ=255) aaaCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACctc > 1:840160/1‑150 (MQ=255) aaCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACctct > 1:1398778/1‑150 (MQ=255) aCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACa < 2:871868/122‑1 (MQ=255) aCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACa > 1:871868/1‑122 (MQ=255) aCTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCGGAGCAAATCGAGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCTATCACCAGGCGACATCCAACCtctc < 2:180439/150‑1 (MQ=255) gAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGAt > 2:125922/1‑150 (MQ=255) gAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGAt < 2:108089/150‑1 (MQ=255) agCGCGCGCTGGCC‑GTgcgcgtgcgctcttccagtttgttcagcattggcacgacttgcggggggtcgattgccaacgcacgcgccaggtcggcctgcatcagcccggggttctggtcgatgatcgccagggcggaaaattgggccgggc < 1:1234058‑M2/150‑135 (MQ=255) cTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTTAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGATGACGAAAGGACt < 2:31589/150‑1 (MQ=255) gCC‑GTGCGCGTGCGGTGCAAACCGGACACGCGCGCGTATGTGATTTGCCTGAGCAAATCGGGCTCCCATTCT‑TTGATGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGATGACGAAAGGACTGaa < 1:1518591/150‑1 (MQ=255) | CCATGACCTGCGCCCGGCCCAATTTTCCGCCCTGGCGATCATCGACCAGAACCCCGGGCTGATGCAGGCCGACCTGGCGCGTGCGTTGGCAATCGACCCCCCGCAAGTCGTGCCAATGCTGAACAAACTGGAAGAGCGCGCGCTGGCC‑GTGCGCGTGCGGTGCAAACCGGACAAGCGCTCGTATGGGATTTTCCTGAGCAAATCGGGCGAGG‑CCCTGTTGAAGGAGTTGAAGCACATCGCCGCCGACAGCGATCACCAGGCGACATCCAACCTCTCGGATGACGAAAGGACTGAA > NC_002947/3799280‑3799574 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |