Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,883,615 C→G 8.3% A197G (GCC→GGC) ‡ PP_3428 → TPR repeat‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,883,6150CG 8.3% 188.7 / 7.6 60A197G (GCC→GGC) ‡PP_3428TPR repeat‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (33/22);  new base G (3/2);  total (36/24)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01

CGACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTG  >  NC_002947/3883466‑3883760
                                                                                                                                                     |                                                                                                                                                 
cGACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGGCTGAATATGCCGACGCCCAAGTGCGCTTGGCGCGCCTGTGCCTGCACGAAAGCGACTGCACGCACTCCGCTGCAGc                                                                                                                                                   >  2:1163196/1‑150 (MQ=255)
cGACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGc                                                                                                                                                   <  1:1583647/150‑1 (MQ=255)
    gCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCt                                                                                                                                                <  2:466680/149‑1 (MQ=255)
    gCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCt                                                                                                                                                >  1:466680/1‑149 (MQ=255)
      cATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCa                                                                                                                                             <  1:32157/150‑1 (MQ=255)
       aTCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGc                                                                                                                                                   >  2:354733/1‑143 (MQ=255)
       aTCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGc                                                                                                                                                   <  1:354733/143‑1 (MQ=255)
                    tCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCgg                                                                                                                               <  1:35435/150‑1 (MQ=255)
                                  tCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCa                                                                                                                                             >  2:233374/1‑122 (MQ=255)
                                  tCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCa                                                                                                                                             <  1:233390/122‑1 (MQ=255)
                                  tCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCa                                                                                                                                             <  1:233374/122‑1 (MQ=255)
                                  tCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCa                                                                                                                                             >  2:233390/1‑122 (MQ=255)
                                     gCCCTGGAGCAATACCAGCAAGCCCCGAACTCATCTCTAGATAGTGGCGACGCCCTAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTc                                                                                                              <  1:772810/150‑1 (MQ=255)
                                       ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGa                                                                                                            >  1:1237306/1‑150 (MQ=255)
                                       ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGACTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCCAGCGCTCGCGGTTGCCCCCGGCAACCTCGa                                                                                                            >  2:583647/1‑150 (MQ=255)
                                       ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGAGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCGGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGa                                                                                                            >  2:1184330/1‑150 (MQ=255)
                                       ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACACCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGa                                                                                                            >  1:302906/1‑150 (MQ=255)
                                       ccTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGACGCCGCTCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGa                                                                                                            >  2:638774/1‑150 (MQ=255)
                                               aaTACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTgg                                                                                                    >  2:1032649/1‑150 (MQ=255)
                                                    cAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGccc                                                                                                                         <  1:36030/124‑1 (MQ=255)
                                                    cAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGccc                                                                                                                         >  2:36030/1‑124 (MQ=255)
                                                    cAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACt                                                                                               >  1:220012/1‑150 (MQ=255)
                                                    cAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACt                                                                                               >  2:1199012/1‑150 (MQ=255)
                                                    cAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACt                                                                                               >  1:47888/1‑150 (MQ=255)
                                                    cAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACt                                                                                               >  1:792797/1‑150 (MQ=255)
                                                      gCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCa                                                                                             >  1:825869/1‑150 (MQ=255)
                                                       cAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAg                                                                                            <  2:1237306/150‑1 (MQ=255)
                                                        aaGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAgg                                                                                           <  2:290036/150‑1 (MQ=255)
                                                         aGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGt                                                                                          <  2:825869/150‑1 (MQ=255)
                                                             cTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGc                                                                                      <  2:792797/150‑1 (MQ=255)
                                                                  gCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCt                                                                                 >  2:1633811/1‑150 (MQ=255)
                                                                         ccTGAAGATGCCGACGCCCAAGTGCACCTGGCGAGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCACTGCAGCGAGCGCTCGAGGTTGCCCCCGGCAACATCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAgcgc                                                                          >  1:1036508/1‑150 (MQ=255)
                                                                                          ccAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGCGCGCCAGGGCCACCACGACGc                                                         >  1:646615/1‑150 (MQ=255)
                                                                                                   ccTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCa                                                >  2:751503/1‑150 (MQ=255)
                                                                                                    cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAg                                                                                            >  1:1324672/1‑105 (MQ=255)
                                                                                                    cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAg                                                                                            <  2:1324672/105‑1 (MQ=255)
                                                                                                    cTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAg                                               <  1:1563323/150‑1 (MQ=255)
                                                                                                     tGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGc                                                                                      <  1:7206/110‑1 (MQ=255)
                                                                                                     tGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGc                                                                                      >  2:7206/1‑110 (MQ=255)
                                                                                                           gcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGcca                                                                  >  1:1223707/1‑124 (MQ=255)
                                                                                                           gcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGcca                                                                  >  1:1223706/1‑124 (MQ=255)
                                                                                                           gcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGcca                                                                  <  2:1223707/124‑1 (MQ=255)
                                                                                                           gcCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGcca                                                                  <  2:1223706/124‑1 (MQ=255)
                                                                                                            ccTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTggg                                       <  1:295308/150‑1 (MQ=255)
                                                                                                             cTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGc                                      >  1:66780/1‑150 (MQ=255)
                                                                                                               gTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCaa                                    >  1:1556851/1‑150 (MQ=255)
                                                                                                                  ccTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGa                                                                              <  2:1487941/105‑1 (MQ=255)
                                                                                                                  ccTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGa                                                                              >  1:1487941/1‑105 (MQ=255)
                                                                                                                  ccTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGc                                 >  2:1535395/1‑150 (MQ=255)
                                                                                                                     gCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCt                              <  2:275626/150‑1 (MQ=255)
                                                                                                                       aCGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGTCGTGTCTACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTgg                            >  1:198624/1‑150 (MQ=255)
                                                                                                                             aCGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGa                      >  2:1181861/1‑150 (MQ=255)
                                                                                                                               gACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGTCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGc                    >  1:287319/1‑150 (MQ=255)
                                                                                                                                  tACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGcccc                 >  2:787039/1‑150 (MQ=255)
                                                                                                                                    cacgcacgCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGa               >  1:761711/1‑150 (MQ=255)
                                                                                                                                          gctcgcTGCAGGGCTGCAGCG‑GCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGcc        >  1:482300/4‑150 (MQ=255)
                                                                                                                                           gccgcTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGcc        >  1:805164/1‑150 (MQ=255)
                                                                                                                                           ctcgcTGCAGGGCTGCAGCG‑GCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCt       >  1:1256183/3‑150 (MQ=255)
                                                                                                                                            tcgcTGCAGGGCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCg           >  1:103356/2‑146 (MQ=255)
                                                                                                                                            tcgcTGCAGGGCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCg           <  2:103356/145‑1 (MQ=255)
                                                                                                                                             cgcTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCtt      <  1:1032649/150‑1 (MQ=255)
                                                                                                                                              gcTGCAGGGCTGCAGCG‑GCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTc    <  2:1256183/150‑1 (MQ=255)
                                                                                                                                               cTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCACCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTc    <  1:1199012/150‑1 (MQ=255)
                                                                                                                                                 gCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTg  <  2:220012/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CGACGCCATCGGCCTCTATTTCGGCCCCCTGCAGTCAGCCCTGGAGCAATACCAGCAAGCCCTGGAGCAACAGCCTGAAGATGCCGACGCCCAAGTGCACCTGGCGCGCCTGTACCTGCACGAAAACGACTACACGCACGCCGCTGCAGCCCTGCAGCGAGCGCTCGCGGTTGCCCCCGGCAACCTCGATGCCCTGGCGACTCAGGTACGCCTGCTCGAGCGCCAGGGCCACCACGACGCCTCCCGCCAGGTGCTGGGCAAAGCCCTGGCGCTGAGCCCCGACTCGGCCTTTCTG  >  NC_002947/3883466‑3883760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑