| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,896,142 | C→A | 6.7% | R216L (CGG→CTG) | PP_3439 ← | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,896,142 | 0 | C | A | 6.7% | 238.2 / 5.3 | 75 | R216L (CGG→CTG) | PP_3439 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (34/36); new base A (3/2); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.67e-01 | |||||||||||
AGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGTCACTGCGATGGG > NC_002947/3895994‑3896283 | aGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCg > 2:1386577/1‑150 (MQ=255) ggAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCgg < 2:521560/150‑1 (MQ=255) ggAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCgg < 2:1212125/150‑1 (MQ=255) ccAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGtt > 1:1071022/1‑150 (MQ=255) ggCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCa > 2:1210327/1‑150 (MQ=255) gCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCAc > 1:1292393/1‑150 (MQ=255) gCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACgcgc > 2:353748/1‑150 (MQ=255) cGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGt < 2:1450938/150‑1 (MQ=255) aTTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGAGTCATCTGCAGTTTCAGCAAGGGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAg > 1:192549/1‑150 (MQ=255) cTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAgg < 1:353748/150‑1 (MQ=255) cTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAgg < 1:740036/150‑1 (MQ=255) tGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGt > 1:518428/1‑150 (MQ=255) tGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGt > 2:276742/1‑150 (MQ=255) tAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAg > 2:1274795/1‑150 (MQ=255) ccccGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCgg < 1:1272338/115‑1 (MQ=255) ccccGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCgg > 2:1272338/1‑115 (MQ=255) cccGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATgc < 1:1025792/150‑1 (MQ=255) ggTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATgcggc < 2:1323810/150‑1 (MQ=255) ggTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATgcggc < 2:1292393/150‑1 (MQ=255) ggTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATgcggc < 2:1071022/150‑1 (MQ=255) gccgccAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCGGGCGCAGTTGCGCCAGGGc > 2:1121931/1‑107 (MQ=255) gccgccAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCGGGCGCAGTTGCGCCAGGGc < 1:1121931/107‑1 (MQ=255) ccgccAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGc < 1:1386577/150‑1 (MQ=255) cAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGaa > 1:396837/1‑150 (MQ=255) gCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCGGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGtt < 1:1231285/150‑1 (MQ=255) cTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTg < 1:1274795/150‑1 (MQ=255) tGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAg > 1:1618946/1‑119 (MQ=255) tGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAg < 2:1618946/119‑1 (MQ=255) tGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTgg < 1:1622671/150‑1 (MQ=255) tGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTgg < 1:669160/150‑1 (MQ=255) tttGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCgg > 2:1283845/1‑91 (MQ=255) tttGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCgg < 1:1283845/91‑1 (MQ=255) tttGAATGCCCGCTGCAGGTGTGCACGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGATAGCCATGCGGCGTCAGGCCGAAGCGTTGGCg > 1:1205651/1‑150 (MQ=255) gAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGaaa < 1:1210327/150‑1 (MQ=255) aaTGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGc < 1:336167/145‑1 (MQ=255) aaTGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGc > 2:336167/1‑145 (MQ=255) aaTGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAg > 1:1420068/1‑150 (MQ=255) aTGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTg < 1:1155691/103‑1 (MQ=255) aTGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTg > 2:1155691/1‑103 (MQ=255) tGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGc < 2:1032457/150‑1 (MQ=255) gtgtGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGGGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCCGCGTCAGGCCGAAGCGTTGGCGGACGGCACGAATCACGTa > 1:839882/1‑150 (MQ=255) tgtgCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAg < 1:1311705/150‑1 (MQ=255) gCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAc > 2:1161255/1‑150 (MQ=255) ccTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAcc > 2:1362454/1‑150 (MQ=255) cTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCg > 2:856838/1‑150 (MQ=255) tGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCa > 1:174074/1‑91 (MQ=255) tGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCa < 2:174074/91‑1 (MQ=255) tGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCga < 1:1362454/150‑1 (MQ=255) aTCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCgagc > 2:763811/1‑149 (MQ=255) aGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAg < 1:431322/150‑1 (MQ=255) cGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGc < 1:763811/150‑1 (MQ=255) gAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGaaa > 2:941144/1‑120 (MQ=255) gAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGaaa < 1:941144/120‑1 (MQ=255) gAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGcc < 2:936189/150‑1 (MQ=255) ccGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCaa < 1:1161255/150‑1 (MQ=255) ctGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCa > 1:939059/1‑150 (MQ=255) ctGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCa > 2:568068/1‑150 (MQ=255) tgCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGAt > 2:1373258/1‑150 (MQ=255) gCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAgg < 1:349298/150‑1 (MQ=255) aTTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTg > 1:1398942/1‑150 (MQ=255) ttGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAcc < 2:879740/111‑1 (MQ=255) ttGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAcc > 1:879740/1‑111 (MQ=255) gCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCgg < 2:192549/150‑1 (MQ=255) tggCCCGGGCGCAGTTGCGCCAGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCggg > 1:233473/2‑150 (MQ=255) gCCCGGGCGCAGTTGCGCCAGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGTc > 2:649314/1‑150 (MQ=255) cccTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAc < 1:1602732/102‑1 (MQ=255) cccTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAc > 2:1602732/1‑102 (MQ=255) cTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAc > 1:1451829/1‑100 (MQ=255) cTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGAc < 2:1451829/100‑1 (MQ=255) cTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAgg > 1:1280123/1‑136 (MQ=255) cTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAgg < 2:1280123/136‑1 (MQ=255) cTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGTCACt > 1:991309/1‑150 (MQ=255) aaCTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCggg < 1:1565639/138‑1 (MQ=255) aaCTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCggg > 2:1565639/1‑138 (MQ=255) gttGCGCCAGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGTCACTGCGATggg < 2:233473/148‑1 (MQ=255) ccGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAgg < 1:1015478/79‑1 (MQ=255) ccGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAgg > 2:1015478/1‑79 (MQ=255) | AGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGAAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGTCACTGCGATGGG > NC_002947/3895994‑3896283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |