| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,609,479 | C→T | 5.5% | T420M (ACG→ATG) | PP_4080 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,609,479 | 0 | C | T | 5.5% | 216.1 / 2.4 | 72 | T420M (ACG→ATG) | PP_4080 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (34/34); new base T (2/2); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
TCGAATCCTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGCAGTCGATGCTT > NC_002947/4609332‑4609628 | tCGAATCCTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACgg > 1:1485182/1‑150 (MQ=255) cGAATCCTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGc < 2:1377163/150‑1 (MQ=255) cGAATCCTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGc < 1:1396789/150‑1 (MQ=255) cTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGATGGCCAAcgg > 1:649683/1‑150 (MQ=255) cTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGATGGCCAAcgg > 1:649294/1‑150 (MQ=255) cTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAAcgg > 1:1242437/1‑150 (MQ=255) cTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAAcgg > 2:436164/1‑150 (MQ=255) ttGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAAcggc > 1:643341/1‑150 (MQ=255) aaTGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGATGGCCAAcggcttc < 2:649683/150‑1 (MQ=255) aaTGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGATGGCCAAcggcttc < 2:649294/150‑1 (MQ=255) gACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATTCGGGCTTCAGCTACTTCGAACTGGACCGCCCTGCCCCCGCCTGGGCCTGCTTGAAGTCGGCCACcgtcttcggc < 2:1225463/150‑1 (MQ=255) cAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGt < 1:436164/150‑1 (MQ=255) aCTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGa < 2:705844/150‑1 (MQ=255) aCTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGa > 2:1213380/1‑150 (MQ=255) cagcGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGt > 1:876056/4‑150 (MQ=255) cGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTg > 2:1568141/1‑150 (MQ=255) ctgctgCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGaa < 1:782986/150‑1 (MQ=255) gcCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGCCCCCGCCTGGGCCTGCATGAAGACGGCCAACCGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCCGGGCTTGAACTGCa > 2:99524/1‑150 (MQ=255) ccccTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCtt < 1:507353/141‑1 (MQ=255) ccccTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCtt > 2:507353/1‑141 (MQ=255) ccccTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTAGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCaa > 2:529441/1‑149 (MQ=255) cccTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGa < 1:1194801/142‑1 (MQ=255) cccTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGa > 2:1194801/1‑142 (MQ=255) cTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACggcttcggcttc < 2:680810/111‑1 (MQ=255) cTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACggcttcggcttc > 1:680810/1‑111 (MQ=255) ccGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTgg > 2:1346668/1‑150 (MQ=255) accacGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGc < 2:6531/125‑1 (MQ=255) accacGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGc > 1:6531/1‑125 (MQ=255) ccacGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCTAGGGCTTGAACTGCAGTTCTGGGCGATCAgg < 2:1009957/150‑1 (MQ=255) ccacGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAgg < 2:1242437/150‑1 (MQ=255) cacGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGCGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGCCTTAAACTGCAGTTCTGCGCGCTCAgcg > 2:686620/1‑148 (MQ=21) gACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGaa < 1:1346668/150‑1 (MQ=255) tGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGat > 2:619041/1‑150 (MQ=255) cccTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACt < 2:385620/119‑1 (MQ=255) cccTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACt > 1:385620/1‑119 (MQ=255) cccTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAAt > 1:729277/1‑145 (MQ=255) cccTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAAt < 2:729277/145‑1 (MQ=255) ccTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATg < 1:619041/150‑1 (MQ=255) tGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACa > 2:977206/1‑150 (MQ=255) ggcgcgcCTCATCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACa < 2:1242786/149‑1 (MQ=255) gCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGTCTTAAACTGCAGTGCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAac < 2:876056/150‑1 (MQ=255) cTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATgg < 1:1112941/138‑1 (MQ=255) cTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATgg > 2:1112941/1‑138 (MQ=255) aGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGtt > 2:249769/1‑75 (MQ=255) aGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGtt < 1:249769/75‑1 (MQ=255) tACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAaccctaccct > 2:69380/1‑150 (MQ=255) tACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAaccctaccct > 2:957114/1‑150 (MQ=255) ttCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCaa < 1:957114/150‑1 (MQ=255) gAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACt < 2:667487/92‑1 (MQ=255) gAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACt > 1:667487/1‑92 (MQ=255) aCTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCa > 2:1579425/1‑93 (MQ=255) aCTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCa < 1:1579425/93‑1 (MQ=255) gACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTg < 2:485585/95‑1 (MQ=255) gACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTg > 1:485585/1‑95 (MQ=255) gACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGc < 2:1485182/150‑1 (MQ=255) cccGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAggg > 2:1120006/1‑94 (MQ=255) cccGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAggg < 1:1120006/94‑1 (MQ=255) cccGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGa > 1:332680/1‑150 (MQ=255) ccGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTggg > 2:901658/1‑84 (MQ=255) ccGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTggg < 1:901658/84‑1 (MQ=255) ccGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGaa > 1:737461/1‑150 (MQ=255) gCCTGGGCCGGCATGAAGACGGCCAACGGCTTCGGCTGCCACGTTGCAGGTGAGTTCCCAGGGCTTAAACTGCAGGTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCGTACCCTCAACGACGCGAAGCACGTTGCGGAAAc < 1:686620/150‑1 (MQ=255) cTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATg < 2:1410801/101‑1 (MQ=255) cTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATg > 1:1410801/1‑101 (MQ=255) gggCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGAt < 1:1568141/150‑1 (MQ=255) ggCCTGCCTGAAGACTGCCAACGGCTTCGGCTTCCACGTTTCAGGTCAATACGCACGGGATCGTCAACGGTGCTTGAACATAAGGGGTGAATGATATGGAAAACAGTAACCCTACCCGCAACGACGCGAAGCACGTTGCGGAAACGGAtt < 1:529441/150‑1 (MQ=255) tGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGCa > 2:681585/1‑150 (MQ=255) gCATGAAGACTGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGCAg < 1:69380/150‑1 (MQ=255) gCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGCAg > 1:9916/1‑150 (MQ=255) cATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGCAGt < 1:977206/150‑1 (MQ=255) gACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGc > 1:1540679/1‑141 (MQ=255) gACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGc < 2:1540679/141‑1 (MQ=255) cGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGCAGTCGATGCtt < 1:1213380/150‑1 (MQ=255) | TCGAATCCTTGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCATGCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCACGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGATATGGAAAACAGTAACCCTACCCTCAACGACGCGAAGCACGTTGCGGAAACGGATTTGCAGTCGATGCTT > NC_002947/4609332‑4609628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |