| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 413,108 | C→G | 7.9% | R687G (CGC→GGC) | glnE → | glutamate‑ammonia‑ligase adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 413,108 | 0 | C | G | 7.9% | 238.8 / 10.5 | 76 | R687G (CGC→GGC) | glnE | glutamate‑ammonia‑ligase adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (31/39); new base G (2/4); total (33/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.23e-01 | |||||||||||
CCATTTCAAGCTGGCCCACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCATGACGGCGATCCGCAGGCGG > NC_002947/412960‑413252 | ccATTTCAAGCTGGCCCACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGCCCGTGGCCCg > 1:8874/1‑150 (MQ=255) tCAAGCTGGCCCACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCGGGCCACg > 2:129358/1‑150 (MQ=255) aGCTGGCCCACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCGGGCCACggtc < 1:129358/150‑3 (MQ=255) ttgCCCACATCCTGCGCGTCGCAGCCTAGCAAGACTGCGGCAATCCGGCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCGGGCCACggtctgg < 2:429691/148‑6 (MQ=255) tGGCCCACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGGCCGTGGCGGGCCACggtctgg < 2:478557/150‑6 (MQ=255) gCCCACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAAccc > 1:389685/1‑150 (MQ=255) ccACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCaa > 1:468871/1‑150 (MQ=255) cacaGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAg < 2:436325/150‑1 (MQ=255) cacaGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAg > 1:275744/1‑150 (MQ=255) gccgccTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGc < 2:1512278/150‑1 (MQ=255) ccgccTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGcc > 2:1054585/1‑150 (MQ=255) ccgccTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGcc > 1:699762/1‑150 (MQ=255) tCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCgg < 1:1054585/150‑1 (MQ=255) tCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGAT‑ACCAAGGCGGGGGCGCCAGACCGTGGCCCGCCACGGCCAACCACAGCCACCCGACGGCAGCCTGTGCGTCCCgg > 1:1593911/1‑150 (MQ=255) gCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGtt < 2:64242/150‑1 (MQ=255) ggCAACCTGCCGTTGATGAAAGTCGGCCACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGTGTGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTtc < 1:359927/150‑1 (MQ=255) aaCCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTtcatc < 2:960989/150‑1 (MQ=255) aaCCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTtcatc > 1:9855/1‑150 (MQ=255) aCCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTtcatca < 2:1030382/150‑1 (MQ=255) ccGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATc < 2:1355864/150‑1 (MQ=255) cGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCg < 2:1388265/150‑1 (MQ=255) cGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCg < 2:699762/150‑1 (MQ=255) gaAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACgg > 2:1363379/1‑150 (MQ=255) aaGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCa < 1:1056902/150‑1 (MQ=255) gACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGggc < 2:275744/150‑1 (MQ=255) tACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGggcggc > 2:330347/1‑150 (MQ=255) tACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGggcggc > 1:716331/1‑150 (MQ=255) cctgacctgGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGt > 2:252398/1‑115 (MQ=255) cctgacctgGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGt < 1:252398/115‑1 (MQ=255) ctgacctgGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTg > 1:103744/1‑150 (MQ=255) gacctgGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGa < 2:963001/150‑1 (MQ=255) tggctggcTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGAt > 1:1267689/1‑134 (MQ=255) tggctggcTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGAt < 2:1267689/134‑1 (MQ=255) gggctggctGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGGCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCTTTATCGGTTACGGCTAGATGGGCGGCCTGGAGCTc < 2:669485/149‑1 (MQ=255) gctggctgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTAc < 2:637214/124‑1 (MQ=255) gctggctgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTAc > 1:637214/1‑124 (MQ=255) tggctgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGcc > 2:960620/1‑150 (MQ=255) gctgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCa > 2:1121811/1‑85 (MQ=255) gctgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCa < 1:1121811/85‑1 (MQ=255) ctgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACg < 1:1285596/150‑1 (MQ=255) tgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCg < 2:855146/143‑1 (MQ=255) tgAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCg > 1:855146/1‑143 (MQ=255) aaGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGtt < 1:1303131/150‑1 (MQ=255) gCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGggc < 2:621543/126‑1 (MQ=255) gCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGGTGCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCg > 2:110836/1‑150 (MQ=255) gCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACACGGGTTTCATCATTATCGGTTACGGCAAGATGggc > 1:621543/1‑126 (MQ=255) tCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggacc > 1:3797/1‑150 (MQ=255) ccTGGACCGGGTGATGTGCCGGGC‑CTGGCGCGAGACGGGGGCGCGGCGGGGGCAACGGAAGCGCAGGGACGGCAGCCTGTGCGGCTCGGGTTTCATCATGATCGGGTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggacct < 2:666596/150‑1 (MQ=255) ccTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggacct < 1:960620/150‑1 (MQ=255) cGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggacctgga < 2:9855/150‑1 (MQ=255) aCCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCt > 1:1212587/1‑73 (MQ=255) aCCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCt < 2:1212587/73‑1 (MQ=255) aGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGacctggacctgg < 2:468871/150‑1 (MQ=255) aGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGCGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGacctggacctgg < 2:1182756/150‑1 (MQ=255) ggTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTa > 1:190116/1‑99 (MQ=255) ggTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTa < 2:190116/99‑1 (MQ=255) tGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCt < 2:103744/150‑1 (MQ=255) ctggccctggc‑cTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggac > 1:506797/1‑135 (MQ=255) ctggccctggc‑cTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggac < 2:506797/135‑1 (MQ=255) ctggccctggc‑cTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTc < 1:330347/150‑1 (MQ=255) ctggccctggc‑cTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTc < 2:8874/150‑1 (MQ=255) ccctggc‑cTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggacctggacc < 2:1469502/138‑1 (MQ=255) ccctggc‑cTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggacctggacc > 1:1469502/1‑138 (MQ=255) ctggc‑ctggcGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCCCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCAt < 1:1363379/150‑1 (MQ=255) gc‑ctggcGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggac > 2:1374602/1‑126 (MQ=255) gc‑ctggcGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCggac < 1:1374602/126‑1 (MQ=255) ctggcGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCg > 1:822864/1‑80 (MQ=255) ctggcGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCg < 2:822864/80‑1 (MQ=255) ggcGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCATGACGGCg > 2:179813/1‑150 (MQ=255) gcCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCATTACGGCGATc > 1:1483667/1‑150 (MQ=255) aGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATc < 2:610388/134‑1 (MQ=255) aGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCAGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATc > 1:610388/1‑134 (MQ=255) gccGTGGCGGGCCACGGTCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTa < 2:163647/66‑1 (MQ=38) gccGTGGCGGGCCACGGTCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTa > 1:163647/2‑67 (MQ=38) cGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCATGACGGCGATCCGCAGGc < 1:179813/150‑1 (MQ=255) tGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGAACTGGTCTTCATCCATGACGGCGATCCGCAGGCgg > 1:421789/1‑150 (MQ=255) cccGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCATGACGGCGATCCGCAGGc < 1:319579/145‑1 (MQ=255) cccGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCATGACGGCGATCCGCAGGc > 2:319579/1‑145 (MQ=255) | CCATTTCAAGCTGGCCCACAGCCTGCGCGTGGCCGCCTCGGAAATCAGCGGCAACCTGCCGTTGATGAAAGTCAGCGACTACCTGACCTGGCTGGCTGAAGCCATCCTCGACCAGGTGCTGGCCCTGGC‑CTGGCGCCAGACCGTGGCCCGCCACGGCCAACCCAAGCGCAGCGACGGCAGCCTGTGCGACCCGGGTTTCATCATTATCGGTTACGGCAAGATGGGCGGCCTGGAGCTCGGCCACGGTTCGGACCTGGACCTGGTCTTCATCCATGACGGCGATCCGCAGGCGG > NC_002947/412960‑413252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |