Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,366,334 G→A 7.2% V90V (GTC→GTT ftsH ← integral membrane ATP‑dependent zinc metallopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,366,3340GA 7.2% 191.1 / 5.3 69V90V (GTC→GTTftsHintegral membrane ATP‑dependent zinc metallopeptidase
Reads supporting (aligned to +/- strand):  ref base G (34/30);  new base A (2/3);  total (36/33)
Fisher's exact test for biased strand distribution p-value = 6.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.60e-01

AGCTCATCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGACCTGCTG  >  NC_002947/5366189‑5366483
                                                                                                                                                 |                                                                                                                                                     
aGCTCATCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGACCATCCAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCa                                                                                                                                                   <  1:100225/150‑1 (MQ=255)
   tCATCGGCCCGCCCTTGCCGCCCGCGCCAACTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGt                                                                                                                                                >  2:403028/1‑150 (MQ=255)
        ggCCCGCCCTTGTCCGCCACGCGACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTg                                                                                                                                           >  2:1303009/1‑150 (MQ=255)
         gcccgcccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGtcgt                                                                                                                                          >  2:437280/1‑147 (MQ=255)
          cccgcccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTgg                                                                                                                                              <  1:517916/145‑1 (MQ=255)
          cccgcccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTgg                                                                                                                                              >  2:517916/1‑145 (MQ=255)
             gcccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGTCGTCGaa                                                                                                                                      <  1:475661/150‑2 (MQ=255)
             gcccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGTCGTCGaa                                                                                                                                      <  1:437280/150‑2 (MQ=255)
                      gcccgcGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCTCGTGGTTGTCGACCAGATCGcc                                                                                                                             <  2:501093/150‑1 (MQ=255)
                       cccgcGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCg                                                                                                                            <  2:1450328/150‑1 (MQ=255)
                         cgcgCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGAt                                                                                                                          >  2:297772/1‑150 (MQ=255)
                                  ttGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCAtt                                                                                                                 >  2:242865/1‑150 (MQ=255)
                                  ttGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCAtt                                                                                                                 >  1:357244/1‑150 (MQ=255)
                                       tCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCgg                                                                                                            >  1:646685/1‑150 (MQ=255)
                                       tCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCgg                                                                                                            <  1:981084/150‑1 (MQ=255)
                                          ggCGAATGAAGAGCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGa                                                                                                         <  2:655241/150‑1 (MQ=255)
                                                  aagaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCCGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCggg                                                                                                 <  1:384242/150‑1 (MQ=255)
                                                    gaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGAc                                                                                                                                      >  1:778405/1‑111 (MQ=255)
                                                    gaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGAc                                                                                                                                      <  2:778405/111‑1 (MQ=255)
                                                    gaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGgcg                                                                                               >  2:1139905/1‑150 (MQ=255)
                                                    gaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGgcg                                                                                               >  2:1047350/1‑150 (MQ=255)
                                                       cATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATg                                                                                                       >  1:942923/1‑139 (MQ=255)
                                                       cATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATg                                                                                                       <  2:942923/139‑1 (MQ=255)
                                                       cATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGcac                                                                                            >  1:527329/1‑150 (MQ=255)
                                                           aaCACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGtc                                                                                                                                            >  2:1600701/1‑97 (MQ=255)
                                                           aaCACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGtc                                                                                                                                            <  1:1600701/98‑2 (MQ=255)
                                                             cacGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCtt                                                                                      <  1:203397/150‑1 (MQ=255)
                                                                ggCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGaa                                                                                   >  1:65165/1‑150 (MQ=255)
                                                                ggCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGaa                                                                                   >  1:203126/1‑150 (MQ=255)
                                                                ggCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGaa                                                                                   <  1:43823/150‑1 (MQ=255)
                                                                   aaTGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGAcc                                                                                                                                                    >  1:740753/1‑82 (MQ=255)
                                                                   aaTGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGAcc                                                                                                                                                    <  2:740753/82‑1 (MQ=255)
                                                                     tGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGt                                                                              >  2:1373806/1‑150 (MQ=255)
                                                                      gATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTc                                                                             <  2:527329/150‑1 (MQ=255)
                                                                        tCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACCCAACAAGAAACCATATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCAAAGTCTTGAGGTTGTCGc                                                                           >  1:1349865/1‑150 (MQ=255)
                                                                          aCCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGAcc                                                                                                                                     >  2:289963/1‑90 (MQ=255)
                                                                          aCCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGAcc                                                                                                                                     <  1:289963/90‑1 (MQ=255)
                                                                            cAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGTTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTg                                                                                                          >  2:1463814/1‑115 (MQ=255)
                                                                            cAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTg                                                                                                          <  1:1463814/115‑1 (MQ=255)
                                                                             aGGATCGGGAAGCCCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTTTCGCCATCg                                                                      <  1:403028/150‑1 (MQ=255)
                                                                              ggATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCCCAGGCTGCTTGCCTTCGACGACCACGTgg                                                                                                                                              <  1:1156025/77‑1 (MQ=255)
                                                                              ggATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCCCAGGCTGCTTGCCTTCGACGACCACGTgg                                                                                                                                              >  2:1156025/1‑77 (MQ=255)
                                                                                         cTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCa                                                          <  1:1047350/150‑1 (MQ=255)
                                                                                         cTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCa                                                          <  1:297772/150‑1 (MQ=255)
                                                                                            gCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTa                                                       >  2:1493965/1‑150 (MQ=255)
                                                                                             ccaccaGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTaa                                                      >  2:616106/1‑150 (MQ=255)
                                                                                               accaGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAatg                                                    >  1:1256289/1‑150 (MQ=255)
                                                                                                ccaGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTTTCGCCATCGGTGCGCTTGCCAGTAatga                                                   >  1:954078/1‑150 (MQ=255)
                                                                                                ccaGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAatga                                                   <  2:203126/150‑1 (MQ=255)
                                                                                                ccaGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAatga                                                   >  2:343985/1‑150 (MQ=255)
                                                                                                  aGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTCCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAatgatg                                                 >  2:947079/1‑150 (MQ=255)
                                                                                                    cAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTa                                               <  2:673031/150‑1 (MQ=255)
                                                                                                           gTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCg                                        >  2:205374/1‑150 (MQ=255)
                                                                                                               aGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACgg                                    <  1:1493965/150‑1 (MQ=255)
                                                                                                                   gCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTcac                                >  2:17574/1‑150 (MQ=255)
                                                                                                                      ctGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACg                             <  1:1139905/150‑1 (MQ=255)
                                                                                                                       tGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCg                                                                      >  2:1378642/1‑108 (MQ=255)
                                                                                                                       tGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCg                                                                      <  1:1378642/108‑1 (MQ=255)
                                                                                                                         ttGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTc                          <  2:646685/150‑1 (MQ=255)
                                                                                                                            cTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGc                                                            <  1:754111/113‑1 (MQ=255)
                                                                                                                            cTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGc                                                            >  2:754111/1‑113 (MQ=255)
                                                                                                                            cTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGAc                       <  1:343985/150‑1 (MQ=255)
                                                                                                                               aGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCa                                                                         <  2:811243/97‑1 (MQ=255)
                                                                                                                               aGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCa                                                                         >  1:811243/1‑97 (MQ=255)
                                                                                                                                 gctgctTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTCGCCATCGACGGTCACACGCTCGACCTTGc                  <  2:1256289/150‑1 (MQ=255)
                                                                                                                                   tgctTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCa                >  2:1155461/1‑150 (MQ=255)
                                                                                                                                    gctTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTCGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCAt               >  2:474977/1‑150 (MQ=255)
                                                                                                                                      ttGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACCGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACgg                                    <  1:225376/127‑1 (MQ=255)
                                                                                                                                      ttGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACgg                                    >  2:225376/1‑127 (MQ=255)
                                                                                                                                                 gacCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCCGTAATGAGGTAGCCGTCGCCGGTGACACGCTGTACCTGGCCATCCTTGACctgctg  <  1:205374/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
AGCTCATCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGACCTGCTG  >  NC_002947/5366189‑5366483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: