| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,389,315 | T→A | 5.1% | L926Q (CTG→CAG) | dld2 → | D‑lactate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,389,315 | 0 | T | A | 5.1% | 316.2 / 6.9 | 100 | L926Q (CTG→CAG) | dld2 | D‑lactate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (50/44); new base A (2/3); total (52/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.56e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
AGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGT > NC_002947/5389166‑5389463 | aGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCCGCCGCACCTGCTAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCt < 2:144193/150‑1 (MQ=255)aGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTACAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCt > 2:913235/1‑150 (MQ=255) ggCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTg < 1:537963/150‑1 (MQ=255) gCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTgg < 2:180689/150‑1 (MQ=255) gCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTgg > 1:840870/1‑150 (MQ=255) gCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTgg < 1:747070/150‑1 (MQ=255) ttACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTgg > 2:651988/1‑147 (MQ=255) ttACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTgg < 1:651988/147‑1 (MQ=255) caccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCAGGTAGAcca < 1:1538309/150‑2 (MQ=255) caccCACGAGCAGAACGCCCACTCGTGGCGCAGCCGGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACcg > 2:1334852/1‑150 (MQ=255) accCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCAGGTAGAccag > 2:123097/1‑148 (MQ=255) cccccGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCAGGTAGAccagg < 1:123097/150‑4 (MQ=255) ccccGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGt > 1:809604/1‑150 (MQ=255) ccGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCa > 2:90431/1‑150 (MQ=255) cGAGCTGAACGCCCACTCGTTGCGCAGCCTGAACGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCAc < 2:739137/150‑1 (MQ=255) aGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCAccc < 2:968816/150‑1 (MQ=255) cTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCgg > 1:1241691/1‑150 (MQ=255) cACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAGGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGCGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACACAGc < 2:1183254/150‑1 (MQ=255) cACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGc < 2:325313/150‑1 (MQ=255) aCTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGcc > 2:285712/1‑150 (MQ=255) cTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCg < 2:1629825/138‑1 (MQ=255) cTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCg > 1:1629825/1‑138 (MQ=255) cTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCct > 1:614377/1‑150 (MQ=255) tCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCctc < 1:1156998/150‑1 (MQ=255) gTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTa > 2:1540153/1‑150 (MQ=255) gcAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAAcgcg < 2:1417112/150‑1 (MQ=255) aGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGtt < 2:417291/150‑1 (MQ=255) aGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGACTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCCGCCTCTAACGCGtt < 2:1297747/150‑1 (MQ=255) ccTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGcc < 2:433448/137‑1 (MQ=255) ccTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGcc > 1:433448/1‑137 (MQ=255) ccTGAAGGACGCCGTGCAGTATTGCAGCCAAGGTATTTGCACCAGCCGCACCTGAAACATTGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGa < 1:838160/150‑1 (MQ=255) gAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGatat > 2:1223631/1‑150 (MQ=255) aaGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGAtata > 1:1209826/1‑150 (MQ=255) gACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGata < 1:425642/145‑1 (MQ=255) gACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGata > 2:425642/1‑145 (MQ=255) gCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCATGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTggg > 2:1238457/1‑150 (MQ=255) gTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAAc < 2:802496/130‑1 (MQ=255) gTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAAc > 1:802496/1‑130 (MQ=255) gTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACAACGGCCTGGTC‑TACGTATTAGACCGCGTCACACGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAg > 1:430723/1‑150 (MQ=255) tGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAgc > 2:670099/1‑150 (MQ=255) gTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCGCGGCCTGGTC‑TACCAGGTAGAcca > 1:1343697/1‑98 (MQ=255) gTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCGCGGCCTGGTC‑TACCAGGTAGAcca < 2:1343697/99‑2 (MQ=255) tATTACAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGc < 1:913235/150‑1 (MQ=255) ttGCAGCGAAGGTATTTCCACCAGCAGCAACTACAACTTAAGCCAGTCTATCTACATCGGCATCGACTAGAATGGAATCGTCGTTCTTGATTG‑CCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGTGCGCTGCGt > 1:1192127/1‑150 (MQ=255) aGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGa > 2:1393336/1‑150 (MQ=255) ggTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGt < 2:255647/150‑1 (MQ=255) gTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg > 1:969096/1‑148 (MQ=255) tttCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTAc > 2:489652/1‑150 (MQ=255) ccaccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg < 2:610259/142‑1 (MQ=255) ccaccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACAACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg > 1:610259/1‑142 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTgg > 2:50990/1‑71 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTgg < 1:50990/71‑1 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGa > 1:55580/1‑136 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGa < 2:55580/136‑1 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCcgc > 1:729176/1‑150 (MQ=255) accaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCcgcg > 1:1488889/1‑150 (MQ=255) ccGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTCACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAagag < 1:285712/150‑1 (MQ=255) gCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGGGTGAATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGc > 2:863389/1‑150 (MQ=255) gaTAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAagag < 2:1176481/138‑1 (MQ=255) gaTAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAagag > 1:1176481/1‑138 (MQ=255) aTAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TGCCCACCAGGCCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCctgctg < 1:1334852/150‑1 (MQ=39) aGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGc < 2:809604/150‑1 (MQ=255) ccACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCcccaccc > 1:761348/1‑150 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGc > 2:1295869/1‑95 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGc < 1:1295869/95‑1 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAg > 2:450866/1‑99 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAg < 1:450866/99‑1 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCgg > 1:234488/1‑126 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCccacccac > 2:1381385/1‑150 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCccacccac < 1:489652/150‑1 (MQ=255) caGCGGCATCGACTACCATGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACt < 1:1238457/150‑1 (MQ=255) tCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGc > 2:1018682/1‑114 (MQ=255) tCGACTACCACGGCCTGGTC‑TACCTGGTAGAACGCGTCACCCGTCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGc < 1:1018682/114‑1 (MQ=255) gACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCa < 2:1192127/150‑1 (MQ=255) gACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCa < 2:1241691/150‑1 (MQ=255) gACTACCACGGCCTGGCC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCa > 2:1488811/1‑150 (MQ=255) aCTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAg < 1:670099/150‑1 (MQ=255) cTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAgc > 2:543438/1‑77 (MQ=255) cTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCAACGCAGCCTCTAACGCGTTGATATAGGTGGGGAgc < 1:543438/77‑1 (MQ=255) cACGGCCTGGTC‑TACCTGGTAGAACGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGccacc > 2:193275/1‑150 (MQ=255) cGGCCTGGTC‑TACCTGGTAGACCGCGTCCCCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCcaccac < 1:1381385/150‑1 (MQ=255) cGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCcaccac > 1:1552146/1‑150 (MQ=255) tGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCa < 1:1054667/36‑1 (MQ=255) tGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCa > 2:1054667/1‑36 (MQ=255) gTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCAtcc > 2:1316327/1‑148 (MQ=255) gTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTc > 2:757127/1‑150 (MQ=255) gTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTc > 1:468352/1‑150 (MQ=255) c‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTcgc > 2:584311/1‑150 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTcgcg > 2:146859/1‑150 (MQ=255) aCCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCgg < 2:729176/150‑1 (MQ=255) aCCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCgg < 1:146859/150‑1 (MQ=255) aCCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCgg < 2:840870/150‑1 (MQ=255) aCCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCgg < 1:1223631/150‑1 (MQ=255) ccTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATccc > 2:1175083/1‑112 (MQ=255) ccTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATccc < 1:1175083/112‑1 (MQ=255) cTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAg < 2:1226432/67‑1 (MQ=255) cTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAg > 1:1226432/1‑67 (MQ=255) cTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGt > 1:1409207/1‑150 (MQ=255) tGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTAc < 2:157284/78‑1 (MQ=255) tGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTAc > 1:157284/1‑78 (MQ=255) | AGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTC‑TACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGT > NC_002947/5389166‑5389463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |