BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_002947	6,098,326	(CAAGCTGCG)_2→1	coding (811‑819/867 nt)	PP_5350 ←	RpiR family transcriptional regulator

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	6098315	6098323	9	232 [0]	[0] 234	PP_5350	RpiR family transcriptional regulator

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6098324 =	0 (0.000)	219 (1.150)	119/264	0.1	100%	coding (821/867 nt)	PP_5350	RpiR family transcriptional regulator
*	?	NC_002947	= 6098314	0 (0.000)	219 (1.150)	119/264	0.1	100%	coding (831/867 nt)	PP_5350	RpiR family transcriptional regulator

Only 100 of 234 total aligned reads displayed.

CGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACGTCGATC  >  NC_002947/6098177‑6098473

cggcctcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGc                                                                                                                                                     <  2:1649905‑M1/3‑1 (MQ=255)

cggcctcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGc                                                                                                                                                     <  1:4297604‑M1/3‑1 (MQ=255)

 ggcctcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCa                                                                                                                                                    >  2:1603343‑M1/147‑150 (MQ=255)

   cctcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAg                                                                                                                                                  <  1:111629‑M1/6‑1 (MQ=255)

     tcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCt                                                                                                                                                <  1:513307‑M1/8‑1 (MQ=255)

       ttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaaccggccagtacagggtgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGc                                                                                                                                              <  1:2002184‑M1/10‑1 (MQ=255)

       ttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGc                                                                                                                                              <  2:3269426‑M1/10‑1 (MQ=255)

          gcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGtt                                                                                                                                           <  2:2040117‑M1/13‑1 (MQ=255)

          gcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGtt                                                                                                                                           >  1:4623215‑M1/138‑150 (MQ=255)

            gggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTc                                                                                                                                         >  2:2700242‑M1/136‑150 (MQ=255)

             ggcttgccccgttcacacaggaattgcaccgatttatagacgtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCa                                                                                                                                        >  2:3378666‑M1/135‑150 (MQ=255)

             ggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCa                                                                                                                                        <  2:562838‑M1/16‑1 (MQ=255)

                ttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGc                                                                                                                                     <  1:2901482‑M1/19‑1 (MQ=255)

                  gcccggttcaaactggatttgcacgtatttttatagttgcactgtacctgtgggtgggggcaagcccgcgaacaggccagtacagtttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGctc                                                                                                                                   >  1:135121‑M1/130‑150 (MQ=255)

                  gccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGctc                                                                                                                                   <  1:2932415‑M1/21‑1 (MQ=255)

                   ccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGctct                                                                                                                                  <  1:2037575‑M1/22‑1 (MQ=255)

                   ccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGctct                                                                                                                                  <  1:3643493‑M1/22‑1 (MQ=255)

                    cccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCtt                                                                                                                                 <  1:138886‑M1/23‑1 (MQ=255)

                     ccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggcccgtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTc                                                                                                                                <  2:1853380‑M1/24‑1 (MQ=255)

                      cgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCa                                                                                                                               >  2:3998687‑M1/126‑150 (MQ=255)

                      cgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCa                                                                                                                               <  2:2806690‑M1/25‑1 (MQ=255)

                       gttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAg                                                                                                                              <  2:2160348‑M1/26‑1 (MQ=255)

                         tcacacaggaattgcacctatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggt                                                                                                                            >  1:1920679‑M1/123‑150 (MQ=255)

                         tcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggt                                                                                                                            >  1:2819883‑M1/123‑150 (MQ=255)

                           acacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggtgg                                                                                                                          >  1:1823654‑M1/121‑150 (MQ=255)

                             acaggaattgcaccgatttatagaagtgcacagtacctgttggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                        <  2:2182860‑M1/32‑1 (MQ=255)

                             acaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                        <  2:1514619‑M1/32‑1 (MQ=255)

                             acaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                        <  2:3333830‑M1/32‑1 (MQ=255)

                             acaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                        >  2:2449455‑M1/119‑150 (MQ=255)

                                ggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGAc                                                                                                                     >  1:3370082‑M1/116‑150 (MQ=255)

                                 gaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGAcc                                                                                                                    <  2:1963317‑M1/36‑1 (MQ=255)

                                   attgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAg                                                                                                                  <  1:1150429‑M1/38‑1 (MQ=255)

                                      gcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCt                                                                                                               >  1:172416‑M1/110‑150 (MQ=255)

                                        accgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAg                                                                                                             <  1:3179508‑M1/43‑1 (MQ=255)

                                        accgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAg                                                                                                             <  1:424913‑M1/43‑1 (MQ=255)

                                                 tagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCcgcgcg                                                                                                    <  1:4362215‑M1/52‑1 (MQ=255)

                                                  agaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCgcgcgc                                                                                                   >  2:513307‑M1/98‑150 (MQ=255)

                                                    aagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCa                                                                                                 <  1:391460‑M1/55‑1 (MQ=255)

                                                       tgcactgtacctgtgggagcggccaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATgg                                                                                              >  1:1564262‑M1/93‑150 (MQ=255)

                                                        tgcaattcctgtgtgaacggggcaagcccgcgaagaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGc                                                                                             <  1:1583671‑M1/59‑1 (MQ=255)

                                                         cacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCa                                                                                            <  2:3032054‑M1/60‑1 (MQ=255)

                                                          acagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCaa                                                                                           <  1:4542128‑M1/61‑1 (MQ=255)

                                                          acagtaccggtgggagcgggcaagcccgcgaacaggccagtacgggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCaa                                                                                           >  2:3629272‑M1/90‑150 (MQ=255)

                                                           cagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAAc                                                                                          >  1:3269426‑M1/89‑150 (MQ=255)

                                                           cagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAAc                                                                                          <  1:3109352‑M1/62‑1 (MQ=255)

                                                              tacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGcc                                                                                       >  1:4134030‑M1/86‑150 (MQ=255)

                                                               acctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGccc                                                                                      <  1:869041‑M1/66‑1 (MQ=255)

                                                                cctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCa                                                                                     <  2:3150203‑M1/67‑1 (MQ=255)

                                                                 ctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCAt                                                                                    <  2:1071071‑M1/68‑1 (MQ=255)

                                                                    tgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCa                                                                                                                   >  2:4129601‑M1/80‑116 (MQ=255)

                                                                    tgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGc                                                                                 >  1:2125510‑M1/80‑150 (MQ=255)

                                                                    tgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGc                                                                                 >  1:706910‑M1/80‑150 (MQ=255)

                                                                    tgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGc                                                                                 <  2:4151758‑M1/71‑1 (MQ=255)

                                                                    tgggagcgggcaagcccgcgaacaggccaggacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacataCGCAAGCTGCGTTTCACGCTCTTCAGTTGGTTGACCAGGCTAGGCCCGCGCGACATGGCAACGCCCATGGc                                                                                 <  2:723308‑M1/71‑1 (MQ=255)

                                                                           gggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGcc                                                                                                  <  1:400945‑M1/54‑1 (MQ=255)

                                                                           gggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGcc                                                                                                  >  2:400945‑M1/73‑126 (MQ=255)

                                                                                agcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGAt                                                                     >  2:2284465‑M1/68‑150 (MQ=255)

                                                                                agcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGAt                                                                     >  1:1650329‑M1/68‑150 (MQ=255)

                                                                                 gcccgcgaaccggccagtacaggttgaattcagtcgtcggtagccttgatcgactggggcgacagtCGCACGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATc                                                                    >  2:3117484‑M1/67‑150 (MQ=255)

                                                                                 gcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATc                                                                    >  2:1362787‑M1/67‑150 (MQ=255)

                                                                                 gcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATc                                                                    <  2:1489628‑M1/84‑1 (MQ=255)

                                                                                   ccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATcac                                                                  >  1:2374665‑M1/65‑150 (MQ=255)

                                                                                           aggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGt                                                          >  2:1284184‑M1/57‑150 (MQ=255)

                                                                                             gccagtacaggttgaattcagtcgtcggtagccttgatcgacttgtgcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTgg                                                        <  1:3196302‑M1/96‑1 (MQ=255)

                                                                                             gccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTgg                                                        <  1:2493395‑M1/96‑1 (MQ=255)

                                                                                                 gtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGcc                                                                                       <  2:3772149‑M1/65‑1 (MQ=255)

                                                                                                   acaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATa                                                  <  2:2552198‑M1/102‑1 (MQ=255)

                                                                                                       gttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATAcgcg                                              <  1:835373‑M1/106‑1 (MQ=255)

                                                                                                        ttgaattcagtcttctgtagcattgatcgacttgggcgacagaCGCAAGCTGAGTTTCAAGCTCTTCATGTGGTTGACCAGGCTAGGCCCTCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGa                                             >  2:2493395‑M1/44‑150 (MQ=255)

                                                                                                        ttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGa                                             >  1:809778‑M1/44‑150 (MQ=255)

                                                                                                        ttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGa                                             >  2:4249962‑M1/44‑150 (MQ=255)

                                                                                                        ttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGa                                             >  2:1125471‑M1/44‑150 (MQ=255)

                                                                                                        ttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGa                                             >  1:3503786‑M1/44‑150 (MQ=255)

                                                                                                             ttcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCa                                        <  1:4398620‑M1/112‑1 (MQ=255)

                                                                                                               cagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGt                                      >  1:4075366‑M1/37‑150 (MQ=255)

                                                                                                                agtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTgg                                                        >  1:2687634‑M1/36‑131 (MQ=255)

                                                                                                                agtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTg                                     >  2:139037‑M1/36‑150 (MQ=255)

                                                                                                                agtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTg                                     >  2:391460‑M1/36‑150 (MQ=255)

                                                                                                                agtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTg                                     <  1:1397265‑M1/115‑1 (MQ=255)

                                                                                                                 gtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTgg                                    >  2:2734306‑M1/35‑150 (MQ=255)

                                                                                                                  tcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTggg                                                       >  1:2092965‑M1/34‑130 (MQ=255)

                                                                                                                  tcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTggg                                   >  1:3782751‑M1/34‑150 (MQ=255)

                                                                                                                  tcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTggg                                   >  1:2376026‑M1/34‑150 (MQ=255)

                                                                                                                      cggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGgtgt                               >  2:1936672‑M1/30‑150 (MQ=255)

                                                                                                                       ggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTa                              >  2:869041‑M1/29‑150 (MQ=255)

                                                                                                                           gccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGAtc                          >  1:1514619‑M1/25‑150 (MQ=255)

                                                                                                                             cttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGAtctc                        <  2:888128‑M1/128‑1 (MQ=255)

                                                                                                                             cttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGAtctc                        >  2:4297604‑M1/23‑150 (MQ=255)

                                                                                                                             cttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGAtctc                        >  1:3760765‑M1/23‑150 (MQ=255)

                                                                                                                             cttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGAtctc                        <  1:4630440‑M1/128‑1 (MQ=255)

                                                                                                                             cttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGAtctc                        >  1:971259‑M1/23‑150 (MQ=255)

                                                                                                                              ttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCg                       >  1:626601‑M1/22‑150 (MQ=255)

                                                                                                                                gatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGgt                     <  2:4544980‑M1/131‑1 (MQ=255)

                                                                                                                                gatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGACAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGgt                     >  2:75617‑M1/20‑150 (MQ=255)

                                                                                                                                 atcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGgtg                    <  1:3313297‑M1/132‑1 (MQ=255)

                                                                                                                                  tcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCa                                                                               <  1:1008973‑M1/73‑1 (MQ=255)

                                                                                                                                                 gaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACGTCGa    <  1:2168857‑M1/148‑1 (MQ=255)

                                                                                                                                                  aCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACGTCGAt   >  2:1673604‑M1/2‑150 (MQ=255)

                                                                                                                                                   CGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACGTCGATc  >  1:3060783‑M1/1‑150 (MQ=255)

                                                                                                                                                   CGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACGTCGATc  <  2:668535‑M1/150‑1 (MQ=255)

CGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACGTCGATC  >  NC_002947/6098177‑6098473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`