Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,340,1260CT48.0% 40.3 / 137.4 98intergenic (+67/‑264)ribAB‑II/PP_38143,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base C (28/23);  new base T (23/24);  total (51/47)
Fisher's exact test for biased strand distribution p-value = 6.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

CGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAG  >  NC_002947/4339977‑4340270
                                                                                                                                                     |                                                                                                                                                 
cgccgcTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGac                                                                                                                                                   <  2:951061/150‑1 (MQ=255)
     cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                              <  2:467417/150‑1 (MQ=255)
     cTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGAcaccac                                                                                                                                              <  2:142238/150‑1 (MQ=255)
        aaaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGa                                                                                                                                           <  2:3422533/150‑1 (MQ=255)
        aaaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGa                                                                                                                                           <  1:3102613/150‑1 (MQ=255)
         aaTACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc                                                                                                                                          <  1:3930432/150‑1 (MQ=255)
           tACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAcac                                                                                                                                        <  1:4476340/150‑3 (MQ=255)
           tACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGc                                                                                                                                        <  1:2024804/150‑1 (MQ=255)
           tACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGc                                                                                                                                        <  1:2514455/150‑1 (MQ=255)
            aCGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCTCCGACGCa                                                                                                                                       <  1:615057/150‑1 (MQ=255)
              gcgGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCAtt                                                                                                                                     <  2:3084848/150‑1 (MQ=255)
               cgGGGCGGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTc                                                                                                                                    <  1:4453460/150‑1 (MQ=255)
                 gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                  <  1:1230813/150‑1 (MQ=25)
                 gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                  <  1:1655486/150‑1 (MQ=25)
                 gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                  <  2:2886980/150‑1 (MQ=255)
                 gggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCGGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                  <  1:3646456/150‑1 (MQ=25)
                  ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                 <  1:910485/150‑1 (MQ=25)
                  ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                 <  2:3813889/150‑1 (MQ=25)
                  ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcg                                                                                                                                 <  2:4429962/150‑1 (MQ=25)
                  ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                 <  1:203354/150‑1 (MQ=255)
                  ggCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                 <  1:2019111/150‑1 (MQ=255)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgcga                                                                                                                                <  2:177056/150‑2 (MQ=25)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                <  2:2794092/150‑1 (MQ=25)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                <  2:2335904/150‑1 (MQ=25)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                <  2:2003333/150‑1 (MQ=25)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                <  2:1649730/150‑1 (MQ=25)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                <  2:4671811/150‑1 (MQ=25)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                <  1:1260422/150‑1 (MQ=25)
                   gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg                                                                                                                                <  1:4485196/150‑1 (MQ=255)
                       gCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                <  2:849907/146‑1 (MQ=25)
                       gCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCgg                                                                                                                                >  1:849907/1‑146 (MQ=25)
                        cGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCGGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTaaa                                                                                                                           <  1:4601164/150‑1 (MQ=255)
                         gggCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑c                                                                                                                         <  2:3340405/150‑1 (MQ=255)
                             tATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGc                                                                                                                     <  2:4518846/150‑1 (MQ=255)
                                          tggtgCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                  >  1:2750780/1‑125 (MQ=21)
                                          tggtgCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                  <  2:2750780/125‑1 (MQ=21)
                                                agagCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                  <  2:3975377/119‑1 (MQ=255)
                                                agagCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgc                                                                                                                                  >  1:3975377/1‑119 (MQ=255)
                                                        ccGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                  >  1:2722383/1‑111 (MQ=18)
                                                        ccGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTcgc                                                                                                                                  <  2:2722383/111‑1 (MQ=18)
                                                                                 gctaaCACCCATTCATTTGATTTTGCGGGGCCCTGTTGGCGGGGTTTTCCCCGGGAATGCGAGTGTGACACCACCGCGGCTTTCG‑GGGTAAACCCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGccc                                                                 <  2:2468730/147‑1 (MQ=255)
                                                                                                aTTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                 >  1:888606/1‑72 (MQ=255)
                                                                                                aTTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg                                                                                                                                 <  2:888606/72‑1 (MQ=255)
                                                                                                aTTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑c                                                                                                                         <  1:2961301/79‑1 (MQ=255)
                                                                                                aTTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑c                                                                                                                         >  2:2961301/1‑79 (MQ=255)
                                                                                                                       gAGCGGGTTTAACCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCAAACCTCTTGCCAAAATCTTGGAATACCATAatatta                           >  2:280485/1‑148 (MQ=255)
                                                                                                                         gCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGata                         >  2:2834629/1‑150 (MQ=255)
                                                                                                                           gggTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATc                       >  2:4500882/1‑150 (MQ=255)
                                                                                                                             gTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATAcc                                    >  2:196697/1‑135 (MQ=21)
                                                                                                                             gTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATAcc                                    <  1:196697/135‑1 (MQ=21)
                                                                                                                             gTTTACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATccc                     >  1:4533795/1‑150 (MQ=25)
                                                                                                                              tttACCCGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCg                    >  2:1792924/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGcccc                                                                <  1:2034055/101‑1 (MQ=17)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGcccc                                                                >  2:2034055/1‑101 (MQ=17)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCtt                                                       <  1:65296/110‑1 (MQ=18)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCtt                                                       >  2:65296/1‑110 (MQ=18)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCtt                                            <  1:1697319/121‑1 (MQ=18)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCtt                                            >  2:1697319/1‑121 (MQ=18)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCt                                             <  2:660120/120‑1 (MQ=18)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCt                                             >  1:660120/1‑120 (MQ=18)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                           <  1:3662725/122‑1 (MQ=21)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTg                                           >  2:3662725/1‑122 (MQ=21)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTa                  <  1:3648789/147‑1 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTa                  >  2:3648789/1‑147 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  2:3920352/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  2:2425469/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  1:1072580/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCCTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  1:956991/1‑150 (MQ=25)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCCAAATCTTGGAATACCAGAATATGATATCCCGTAGAc               >  1:2604071/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATg                            <  2:2905845/137‑1 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATg                            >  1:2905845/1‑137 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  1:1620148/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  1:1183014/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  2:4336088/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  2:2748484/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  1:3639201/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  1:3585995/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAc               >  1:1768541/1‑150 (MQ=255)
                                                                                                                                   ccGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCGTGCCAAAATCTTGGACTACCATAATATGAGATCCCGTAGAc               >  2:4426589/1‑150 (MQ=255)
                                                                                                                                    cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACctc                                                         <  1:4215496/107‑1 (MQ=17)
                                                                                                                                    cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACctc                                                         >  2:4215496/1‑107 (MQ=17)
                                                                                                                                    cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc              >  2:3557999/1‑150 (MQ=25)
                                                                                                                                    cgcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc              >  2:1383094/1‑150 (MQ=25)
                                                                                                                                    cgcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAcc              >  2:4431245/1‑150 (MQ=255)
                                                                                                                                     gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGAccg             >  2:3196155/1‑149 (MQ=25)
                                                                                                                                     gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt             >  2:1288037/1‑150 (MQ=25)
                                                                                                                                     gcgAATGCGTCGGTGGTGTCACCCTCGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt             >  2:887195/1‑150 (MQ=25)
                                                                                                                                     gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGcc                                                                  <  2:3828878/97‑1 (MQ=255)
                                                                                                                                     gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGcc                                                                  >  1:3828878/1‑97 (MQ=255)
                                                                                                                                     gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt             >  1:3456353/1‑150 (MQ=255)
                                                                                                                                     gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt             >  1:3456357/1‑150 (MQ=255)
                                                                                                                                     gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt             >  1:3843104/1‑150 (MQ=255)
                                                                                                                                     gcgAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCt             >  1:1079691/1‑150 (MQ=255)
                                                                                                                                        aaTGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGa          <  2:1768541/150‑1 (MQ=255)
                                                                                                                                          tGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGt        >  2:80959/1‑150 (MQ=255)
                                                                                                                                           gCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTc       >  1:223292/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAGTATGATATCCCGTAGACCTTGAGTCTg     >  2:2897168/1‑150 (MQ=255)
                                                                                                                                             gAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTg     >  2:1926243/1‑150 (MQ=255)
                                                                                                                                              aGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGc    >  1:4044300/1‑150 (MQ=255)
                                                                                                                                                ggTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCGTGAGTCTGCAg  >  2:4678605/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGGGTAAA‑CCCGCTCCTACAGGGCCCTTGGTGCTTTTGACAGGGCGGAGTGATGGCCGGTCGCCCCATACCTCTTGCCAAAATCTTGGAATACCATAATATGATATCCCGTAGACCTTGAGTCTGCAG  >  NC_002947/4339977‑4340270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑