| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,555,432 | Δ1 bp | 7.2% | intergenic (+28/+46) | sbcB → / ← PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,555,432 | 0 | G | . | 7.2% | 247.0 / 14.4 | 83 | intergenic (+28/+46) | sbcB/PP_1366 | exodeoxyribonuclease I/transcriptional regulator MvaT |
| Reads supporting (aligned to +/- strand): ref base G (38/37); new base . (4/2); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.52e-01 | |||||||||||
CGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGA > NC_002947/1555287‑1555572 | cGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGcc > 1:1603736/1‑150 (MQ=255)cGACTTCGAAAAGGAGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTTCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGcc < 2:664939/150‑1 (MQ=255) gACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCg > 2:1999542/1‑150 (MQ=255) gACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCg > 1:576565/1‑150 (MQ=255) aCTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCgg > 2:273984/1‑150 (MQ=255) ttCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCg > 1:616098/1‑150 (MQ=255) ttCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCg > 1:687649/1‑150 (MQ=255) tCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACAT‑TGCCGGCGt < 1:2173336/150‑1 (MQ=255) gAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGttt < 1:1621259/150‑1 (MQ=255) aaaaGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGtttt < 1:213700/150‑1 (MQ=255) aaaGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGttttt < 2:1603736/150‑1 (MQ=255) ggCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTttgtt < 2:687649/150‑1 (MQ=255) ggCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTttgtt < 1:1879400/150‑1 (MQ=255) cAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGaa > 1:307503/1‑150 (MQ=255) gCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGt > 2:320966/1‑134 (MQ=255) gCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGt < 1:320966/134‑1 (MQ=255) aaGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCaa > 1:504916/1‑150 (MQ=255) gCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCAGGCGTTTTTGTTGTGCGAAGCAaga < 1:661593/150‑1 (MQ=255) cgcCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCg < 2:123275/150‑1 (MQ=255) gcCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCgg > 2:1494761/1‑150 (MQ=255) acgaGGCAGGCAGGCGCGTGTGGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATaa > 2:2316544/1‑150 (MQ=255) ggcaggcGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCca < 2:1224511/150‑1 (MQ=255) gcgTGTTGGAGGCCTGGCAGCTGCATACTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGt > 2:2258667/1‑150 (MQ=255) gcgTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAgggc > 1:2025520/1‑149 (MQ=255) cgTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGtt < 1:1999542/150‑1 (MQ=255) tgtTGGAGGCCGGGCACGCGCATGATCGACATGTGCAGGAACGTTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGc < 2:504916/150‑1 (MQ=255) gAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCgg > 2:1511880/1‑123 (MQ=255) gAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCgg < 1:1511880/123‑1 (MQ=255) ggCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGTTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGt < 1:307566/115‑1 (MQ=255) ggCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGt > 2:307566/1‑115 (MQ=255) cTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCa > 1:882089/1‑125 (MQ=255) cTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCa < 2:882089/125‑1 (MQ=255) gCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCg < 1:1967767/114‑1 (MQ=255) gCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCg > 2:1967767/1‑114 (MQ=255) cTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATACAAAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCg > 2:2322028/1‑110 (MQ=255) cTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCg < 1:2322028/110‑1 (MQ=255) gCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTcg < 1:1494761/150‑1 (MQ=255) cATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTcgc > 2:2215242/1‑150 (MQ=255) gCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACAT‑TGCCGGCGttt < 1:346431/75‑1 (MQ=37) gCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCACAT‑TGCCGGCGttt > 2:346431/1‑75 (MQ=37) tagACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGccc < 1:6035/148‑1 (MQ=255) cGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGcccc > 2:2306213/1‑150 (MQ=255) cAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCtt < 1:2258667/150‑1 (MQ=255) aGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGt < 2:2016668/144‑1 (MQ=255) aGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGt > 1:2016668/1‑144 (MQ=255) aGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCttt > 2:1048395/1‑150 (MQ=255) ggAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTc > 1:1614174/1‑150 (MQ=255) cTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGccc < 2:1877623/109‑1 (MQ=255) cTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGccc > 1:1877623/1‑109 (MQ=255) ttCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGccc < 1:609165/106‑1 (MQ=255) ttCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGccc > 2:609165/1‑106 (MQ=255) ttCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTc > 1:1075704/1‑150 (MQ=255) ttCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTc > 2:739131/1‑150 (MQ=255) tCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCa < 2:576565/150‑1 (MQ=255) tCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCa < 2:307503/150‑1 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt < 2:48000/84‑1 (MQ=255) aaTCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt > 1:48000/1‑84 (MQ=255) tCGGCTGATGGGAGATAAACAAAACCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTGCGGGAGAGTTGCCCAGCTTTGAACCACGTCGCGGGCACAAGTGGCTTTGCGCTTTTTCAGGGt > 2:1070878/1‑150 (MQ=255) tCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTc < 2:920302/136‑1 (MQ=255) tCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTc > 1:920302/1‑136 (MQ=255) gCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt > 2:412457/1‑79 (MQ=255) gCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAAt < 1:412457/79‑1 (MQ=255) gATGGCAGAAAAACAAAACCGCCGGCT‑ATGCGTCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTtgtg < 1:1070878/150‑1 (MQ=255) tGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGt > 1:1242285/1‑150 (MQ=255) gCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTg > 2:287227/1‑150 (MQ=255) aTAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTg < 2:2075491/146‑1 (MQ=255) aTAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTg > 1:2075491/1‑146 (MQ=255) aaCAAAAACGCCGGCACAT‑TGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCtt > 1:38002/1‑150 (MQ=255) aCAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGATGGCGTATGCGGATAATCAGTCCAGCAGGGTTGTAATGATAGTAGCCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCttt > 1:1694723/1‑150 (MQ=255) aCAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGcc > 1:728697/1‑82 (MQ=255) aCAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGcc < 2:728697/82‑1 (MQ=255) aaaaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGt > 1:1454963/1‑109 (MQ=255) aaaaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGt < 2:1454963/109‑1 (MQ=255) aaaaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTgg > 1:213483/1‑111 (MQ=255) aaaaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTgg < 2:213483/111‑1 (MQ=255) aaaaCGCCGGCACAT‑TGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGt > 1:1859504/1‑150 (MQ=255) aaaaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGt < 2:1075704/150‑1 (MQ=255) aaCGCCGGCACAT‑TGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCaa > 1:2338374/1‑87 (MQ=38) aaCGCCGGCA‑CATTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCaa < 2:2338374/87‑1 (MQ=38) aaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGttt < 1:739131/150‑1 (MQ=255) aaCGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGttt < 2:1242285/150‑1 (MQ=255) aaCGCCGGCA‑ATCTGCCGGCGTTTTTGTTGTGCGAAGCAAGCAGAAGTCGGCATACGAGCTGTCCTGTTGTGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGttt < 1:273984/150‑1 (MQ=255) gCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGa < 1:2215242/150‑1 (MQ=255) | CGACTTCGAAAAGGCGCGCCAGCAAGCCTGGGAGGGCGCCGACGAGGCAGGCAGGCGCGTGTTGGAGGCCTGGCAACTGCATGCTCGACAATTGCAGGAACGCTATTCAATCGGCTGATGGCAGATAAACAAAAACGCCGGCA‑ATGTGCCGGCGTTTTTGTTGTGCGAAGCAAGAGGGCGTATGCGGATAATCAGTCCAGCAGGGTTGCCCAGCTTTCAACCACGTCGCCGCCCCAAGTGGCTTTCCACTCTTTCAGGGTCTTGTGGTTGCCGCCTTTGGTTTCGA > NC_002947/1555287‑1555572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |