| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,993,647 | Δ1 bp | 7.8% | intergenic (+42/+56) | PP_1780 → / ← PP_1781 | mannosyltransferase/acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,993,647 | 0 | A | . | 7.8% | 248.3 / 17.3 | 90 | intergenic (+42/+56) | PP_1780/PP_1781 | mannosyltransferase/acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (37/41); new base . (4/3); total (44/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
CTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGGGA > NC_002947/1993507‑1993794 | cTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTg < 2:1830845/150‑1 (MQ=255) tACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGc > 2:950253/1‑150 (MQ=255) aCATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGC‑GCCGCACTGCa < 2:1221260/150‑1 (MQ=255) aCATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCa < 2:1211043/150‑1 (MQ=255) aCATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCa < 2:2129353/150‑1 (MQ=255) gAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCtt > 1:2200536/1‑150 (MQ=255) aaaGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGC‑GCCGCACTGCAgg < 1:1167163/141‑1 (MQ=255) aaaGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑TGCGCCGCACTGCAgg > 2:1167163/1‑141 (MQ=255) aGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCat < 1:2129729/150‑1 (MQ=255) aGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCat > 2:63295/1‑150 (MQ=255) tGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTGAAGGGCACGGATTGCGTGCGCTTGGCCGTCCATGAACCCTGCAGTGCGCC‑GCGGACGCACTGCAAGGCTTTTGCCatat > 2:620313/1‑150 (MQ=255) gCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATg > 1:654781/1‑150 (MQ=255) cTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACtt > 2:1655504/1‑150 (MQ=255) gAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGt < 1:1843184/150‑1 (MQ=255) aCTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTAt < 2:2177126/150‑1 (MQ=255) aCTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTCAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACCCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTAt < 1:453452/150‑1 (MQ=255) cTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGACATATGACTTGtggg > 1:1788907/1‑147 (MQ=255) cTGGTGTTGTATGTTACAGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGAACTGATTGCGTACGCTTGGACATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTAGGAGGCTCGCa < 2:674011/150‑1 (MQ=255) tGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCt > 2:1291071/1‑150 (MQ=255) ggAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCat > 2:1833323/1‑112 (MQ=255) ggAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCat < 1:1833323/112‑1 (MQ=255) ggAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCg < 1:1291071/150‑1 (MQ=255) ggAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCg > 2:1643673/1‑150 (MQ=255) aaTACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTa > 1:1378863/1‑150 (MQ=255) cTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGAACGCAGTAAACGCGCTTATCCGGCTACggg < 1:63295/150‑1 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGc < 2:586999/150‑1 (MQ=255) cAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGca < 2:654781/150‑1 (MQ=255) aGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGcac > 2:2147705/1‑150 (MQ=255) aGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg < 2:2104483/150‑1 (MQ=255) ggCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGc < 2:1212431/150‑1 (MQ=255) ggCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGc < 1:1655504/150‑1 (MQ=255) gcgcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCa < 2:1849112/108‑1 (MQ=255) gcgcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCa > 1:1849112/1‑108 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg < 2:2186994/131‑1 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg > 1:2186994/1‑131 (MQ=255) ccTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgc < 2:861134/150‑1 (MQ=255) tGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTTTTTTTTTTTTTGTATGAGGCACGCAGTAAACCCTCTAAGCCGGCCACGTTCACAGCCTGGTGGCGATGgcgt > 2:967147/1‑149 (MQ=255) gCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCa > 2:947388/1‑150 (MQ=255) cTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCa > 2:1613032/1‑67 (MQ=255) cTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCa < 1:1613032/67‑1 (MQ=255) tCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGa > 1:2064207/1‑150 (MQ=255) tCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGa > 1:1994676/1‑150 (MQ=255) tCAAGCGCACAGATCGCGTAAGCTTGGCCATCAATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACATGTATGAGGAACGCAGTAAACGCGATTATCCGGCTAAGGGCACAGCATGGCGACGCTGGCGCAGa > 2:1646578/1‑150 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCa > 2:294636/1‑98 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCa < 1:294636/98‑1 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGt < 1:446786/100‑1 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGt > 2:446786/1‑100 (MQ=255) aaGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATa > 1:2123419/1‑150 (MQ=255) gcACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGt > 1:1664316/1‑150 (MQ=255) taCTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑ACAGCAGCTTTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGtt < 1:1310782/149‑1 (MQ=255) cACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGtt > 2:878163/1‑150 (MQ=255) cACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGtt < 1:2092098/150‑1 (MQ=255) aCTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTg > 1:1880129/1‑150 (MQ=255) cTGATTGCGTACGCTTGGCCATCCACGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGa < 2:1994676/150‑1 (MQ=255) tGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCgg < 2:2200536/150‑1 (MQ=255) gTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg < 2:1627225/117‑1 (MQ=255) gTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg > 1:1627225/1‑117 (MQ=255) gTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCg > 1:357834/1‑150 (MQ=255) gTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCg > 2:1043036/1‑150 (MQ=255) ccatccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTccagccag > 1:934700/1‑150 (MQ=255) catccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCcagccagc > 1:1704302/1‑150 (MQ=255) atccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCg < 1:723263/150‑1 (MQ=255) atcaatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGa < 1:902613/130‑1 (MQ=255) atcaatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGa > 2:902613/1‑130 (MQ=255) atGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGc < 2:899219/98‑1 (MQ=255) atGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGc > 1:899219/1‑98 (MQ=255) atGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 2:2123419/150‑1 (MQ=255) tGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTggg > 1:822815/1‑150 (MQ=255) tGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTggg < 2:934700/150‑1 (MQ=255) gAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAgg > 2:1363118/1‑59 (MQ=255) gAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAgg < 1:1363118/59‑1 (MQ=255) aCCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCa > 1:848884/1‑150 (MQ=255) ccTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAAc < 2:848884/150‑1 (MQ=255) cTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACa < 2:822815/150‑1 (MQ=255) tGCAGTGCGGCTGC‑GCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGc > 1:1558168/1‑78 (MQ=37) tGCAGTGCGGCTGC‑GCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGa < 2:1482865/118‑1 (MQ=255) tGCAGTGCGGCTGC‑GCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGa > 1:1482865/1‑118 (MQ=255) tGCAGTGCGGCTGC‑GCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAg > 1:2163565/1‑150 (MQ=255) tGCAGTGCGGCTGC‑GCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAg > 2:2196763/1‑150 (MQ=255) tGCAGTGCGGC‑TGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGc < 2:1558168/78‑1 (MQ=37) tGCAGTGCGGC‑TGCGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAg > 2:223682/1‑150 (MQ=255) tGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg > 2:1693451/1‑142 (MQ=255) tGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 1:1693451/142‑1 (MQ=255) tGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAg < 1:620313/150‑1 (MQ=255) aGTGCGGC‑TGCGCCGCACTGCAGGGTTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGc < 1:1218274/110‑1 (MQ=255) tGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTa < 2:2064207/150‑1 (MQ=255) gc‑gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCgg < 2:1378863/150‑1 (MQ=255) gc‑gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCgg < 1:950253/150‑1 (MQ=255) c‑gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCggg > 2:2083333/1‑150 (MQ=255) gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGGGa < 2:690606/150‑1 (MQ=255) | CTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGGGA > NC_002947/1993507‑1993794 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |