| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,422,853 | Δ1 bp | 7.3% | coding (968/2211 nt) | PP_3038 → | TraC domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,422,853 | 0 | C | . | 7.3% | 331.2 / 21.5 | 110 | coding (968/2211 nt) | PP_3038 | TraC domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (50/49); new base . (4/4); total (55/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.19e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TGCTGCGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGCGC > NC_002947/3422707‑3422998 | tgctgcGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑c > 2:1492423/1‑150 (MQ=255)tgctgcGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑c > 2:544461/1‑150 (MQ=255) tgcGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCgg < 1:2006994/150‑1 (MQ=255) ggtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGG‑TAGCCGGTGGCtt < 2:1931022/150‑2 (MQ=255) gtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTgg > 2:1740756/1‑150 (MQ=255) tgtgGGTGGCAAGGTAGTCGGCCCGATCTGCTCGGCTGAGAGTGGGGTTAAATGGACCGACTTCAACTACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGGTCAAGCCACGGGCTA‑CCGGTGGCTGTaa < 2:510768/150‑1 (MQ=255) gtgggtggCCAGGTAGTCGGCCAGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAg < 1:599041/150‑1 (MQ=255) ggggtggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAgg < 1:1932562/149‑1 (MQ=255) tggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCCGGAAGGACAt < 1:967738/150‑1 (MQ=255) gTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATg > 2:932469/1‑144 (MQ=255) gTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATg < 1:932469/144‑1 (MQ=255) gTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGcc < 1:182064/150‑1 (MQ=255) tCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGa < 2:1183478/150‑1 (MQ=255) cGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGAc < 1:1740756/150‑1 (MQ=255) ggCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGa < 1:696177/134‑1 (MQ=255) ggCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGa > 2:696177/1‑134 (MQ=255) gCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTg > 1:926177/1‑150 (MQ=255) cccGATATTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTAAACGCCCTCCATTGCGCTGACTGCCTTGAGGCCGTTCCCCGGGAAGCCACGGAAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCCGGCCAGGACTgg < 2:586987/150‑2 (MQ=255) ccGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTgag > 2:1340935/1‑150 (MQ=255) gATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGagag < 2:1318351/150‑1 (MQ=255) tcttctCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtg < 1:1492423/150‑1 (MQ=255) tcttctCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtg < 2:1099826/150‑1 (MQ=255) ttctCGGCTGAGCGTGAGTTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtggt < 1:230254/150‑1 (MQ=255) tctcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCCAGCCACCGG‑TAGCCGGTGGCt < 2:898487/117‑1 (MQ=255) tctcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCCAGCCACCGG‑TAGCCGGTGGCt > 1:898487/1‑117 (MQ=255) ggCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCt < 1:842728/150‑1 (MQ=255) gCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGc < 1:1633678/150‑1 (MQ=255) cGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGcc < 2:421651/150‑1 (MQ=255) cGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGcc > 1:307177/1‑150 (MQ=255) gTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGccc > 1:1232145/1‑150 (MQ=255) gTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGccc > 2:924189/1‑150 (MQ=255) gTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGccc > 2:693967/1‑150 (MQ=255) gTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCCTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGccc < 1:1005040/150‑1 (MQ=255) ggTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑c < 1:449392/93‑1 (MQ=255) ggTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑c > 2:449392/1‑93 (MQ=255) ggTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCatat < 1:544461/150‑1 (MQ=255) gTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGAc < 1:1207170/108‑1 (MQ=255) gTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGAc > 2:1207170/1‑108 (MQ=255) gTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATg > 2:1563987/1‑150 (MQ=255) ttAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGACTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGc > 2:561671/1‑150 (MQ=255) tAAATGGACCGTCGTCAACGTCCTTCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGACCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCa < 2:444657/150‑1 (MQ=255) aaaTGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAg < 2:1525589/150‑1 (MQ=255) aaTGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CAGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGa > 1:343851/1‑150 (MQ=255) aTGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGaa > 1:1928131/1‑150 (MQ=255) tGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAAc < 1:1498808/150‑1 (MQ=255) tGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAAc < 2:926177/150‑1 (MQ=255) gACCGACTTCAACGACCTGCATTGCGCTGAAAGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCACGCCCAGGGATG‑TACACACCGCCAGTTACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCGCATATGCAGAACGt > 1:2280505/1‑150 (MQ=255) aCCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGGTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTc < 2:358559/150‑1 (MQ=255) aCCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTc > 1:1456372/1‑150 (MQ=255) gACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGaa < 2:1689103/150‑1 (MQ=255) aCTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAAc > 1:959030/1‑150 (MQ=255) aCTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAAc > 1:1052595/1‑150 (MQ=255) ttCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTg > 1:1339919/1‑150 (MQ=255) ttCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGCTGCCCTGATCGCCTATATGCAGAACGTCGAACTg > 1:1337213/1‑150 (MQ=255) tCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGa < 2:1453758/91‑1 (MQ=255) tCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGa > 1:1453758/1‑91 (MQ=255) tCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGa > 2:2076947/1‑150 (MQ=255) cAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGAt > 2:84183/1‑150 (MQ=255) cGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCt > 1:1663973/1‑150 (MQ=255) aCCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTgg < 2:1339919/150‑1 (MQ=255) cTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGcc > 2:1162335/1‑150 (MQ=255) tcATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCaa < 2:963155/149‑1 (MQ=255) gcTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGt < 1:949387/63‑1 (MQ=255) gcTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGt > 2:949387/1‑63 (MQ=255) gcTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTg > 1:1272051/1‑81 (MQ=255) gcTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTg < 2:1272051/81‑1 (MQ=255) tGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAgcg > 1:1437543/1‑150 (MQ=255) aaGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCt > 2:2241577/1‑150 (MQ=255) ggCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGGGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTgg > 1:1429248/1‑150 (MQ=255) gCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGa > 1:971544/1‑150 (MQ=255) gCCTTCAGGCCGTCCTCCGGCAAGTCACGGCAGTGATCAAGCCAGAGGCTA‑CCGGTGCCTGAAAGGATATGCTGGCCAGGACTGAGAGTGATGCCCTGCTTGTCCATATGCAGAACGTAGAACTTATCCTGGCCAATGATGAGCGCTGGa < 2:959030/150‑1 (MQ=255) cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtg < 1:302235/88‑1 (MQ=255) cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtg > 2:302235/1‑88 (MQ=255) cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAg > 2:1250970/1‑141 (MQ=255) cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAg < 1:1250970/141‑1 (MQ=255) cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGc > 1:616011/1‑150 (MQ=255) gCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTg > 2:2058666/1‑150 (MQ=255) gTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGaa < 2:2290915/53‑1 (MQ=255) gTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGaa > 1:2290915/1‑53 (MQ=255) ccGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTa < 2:1456372/150‑1 (MQ=255) aaGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACg > 2:1972101/1‑150 (MQ=255) gTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGcc < 2:2280505/150‑1 (MQ=255) tCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCt > 1:97849/1‑150 (MQ=255) cttccaGCCACCGG‑TAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCggt < 2:643509/116‑2 (MQ=255) ttccaGCCACCGGTAG‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCgg < 2:1312533/124‑1 (MQ=255) ttccaGCCACCGG‑TAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACTTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCgg > 1:1312533/5‑128 (MQ=255) aTCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAatgat < 1:50887/105‑1 (MQ=255) aTCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAatgat > 2:50887/1‑105 (MQ=255) aGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCa > 1:1501684/1‑150 (MQ=255) aGCCACCGG‑TAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGt > 1:1588301/1‑125 (MQ=255) aGCCACCGG‑TAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGt < 2:1588301/125‑1 (MQ=255) ccACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTcc > 1:1803976/1‑141 (MQ=255) ccACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTcc < 2:1803976/141‑1 (MQ=255) ccACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATg < 1:2076947/150‑1 (MQ=255) cACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCaa > 1:1045395/1‑94 (MQ=255) aCCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATc > 1:2151181/1‑85 (MQ=255) aCCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATc < 2:2151181/85‑1 (MQ=255) ccGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGCCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATgcgc < 2:2284946/150‑1 (MQ=255) gCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTg > 1:1932757/1‑101 (MQ=255) gCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTg < 2:1932757/101‑1 (MQ=255) | TGCTGCGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTA‑CCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGCGC > NC_002947/3422707‑3422998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |