| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,241,968:1 | +T | 9.8% | intergenic (+27/+31) | grxD → / ← bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,241,968 | 1 | . | T | 9.8% | 338.2 / 33.2 | 92 | intergenic (+27/+31) | grxD/bfr‑II | monothiol glutaredoxin/bacterioferritin |
| Reads supporting (aligned to +/- strand): ref base . (44/39); new base T (5/4); total (49/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.71e-01 | |||||||||||
CTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAGC > NC_002947/1241822‑1242116 | cTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GAt > 1:1921069/1‑150 (MQ=255)cTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GAt > 1:1655416/1‑150 (MQ=255) tggTACCCAGTGAGCTGGTTGGCGTCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTCATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGc < 1:932946/149‑1 (MQ=255) gatctggTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCggg < 2:635937/145‑1 (MQ=255) cGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttt < 2:106816/150‑1 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGCAATGTTTGAGAGGCGTGAACCGCAAACCCTGAGCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtagatc > 1:635937/1‑145 (MQ=255) gTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt < 2:1655416/150‑1 (MQ=255) gAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTa < 1:435431/150‑1 (MQ=255) tGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATg‑gg > 2:1751012/1‑150 (MQ=255) ttGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGTTTTTTTATgcttgc < 1:1653574/150‑6 (MQ=39) ggcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAg < 1:30821/150‑1 (MQ=255) gcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt < 1:1504063/135‑1 (MQ=255) gcAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGtttttt > 2:1504063/1‑135 (MQ=255) tcatGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCg < 1:567221/150‑1 (MQ=255) catGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATATTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGc < 1:92042/150‑1 (MQ=255) atGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGcc > 2:1466467/1‑150 (MQ=255) tGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttttttt < 1:924428/124‑1 (MQ=255) tGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttttttt > 2:924428/1‑124 (MQ=255) gCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCa > 1:1101136/1‑150 (MQ=255) tGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTAt < 2:826715/123‑1 (MQ=255) tGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTAt > 1:826715/1‑123 (MQ=255) gAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCcgc > 1:762631/1‑102 (MQ=255) gAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCcgc < 2:762631/102‑1 (MQ=255) gAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCAAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTATTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTg > 2:429682/1‑150 (MQ=255) gTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACt > 1:219682/1‑150 (MQ=255) gagaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGATTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAg > 1:1665713/1‑150 (MQ=255) gaAGGGTGAGCTGCAACCCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGt < 2:726698/150‑1 (MQ=255) gaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTa < 2:1828354/124‑1 (MQ=255) gaAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTa > 1:1828354/1‑124 (MQ=255) gTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGATTCTGAAGTCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTtc < 1:2200474/150‑1 (MQ=255) tGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTtct > 2:2039518/1‑150 (MQ=255) gCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttt < 1:1901566/97‑1 (MQ=38) gCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttt > 2:1901566/1‑97 (MQ=38) gCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGa < 1:783003/150‑1 (MQ=255) cTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttt < 2:758924/96‑1 (MQ=38) cTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttt > 1:758924/1‑96 (MQ=38) cTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGAt > 2:724691/1‑150 (MQ=255) tGCAAACCCTGATCCCGGACGCGCCTGCCACCACCCAGCCACCCCAAGCCGGATCTTCCGGCAGTCATAATAAAACCCGC‑GATCACCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGAtc > 2:266434/1‑149 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttttt < 2:1026967/95‑1 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGttttt > 1:1026967/1‑95 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATa < 2:1921069/150‑1 (MQ=255) tGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGA‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATa > 2:1241709/1‑150 (MQ=255) gCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATAc > 1:444877/1‑150 (MQ=255) cAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGAATGCAGGTAGTTCTCGATAcc > 2:2287573/1‑150 (MQ=255) aaaCCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCg < 1:724691/150‑1 (MQ=255) aCCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttt < 2:1852614/90‑1 (MQ=38) aCCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGCTGATC‑GCGGGttttt > 1:1852614/1‑90 (MQ=38) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTa > 1:1183726/1‑133 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTa < 2:1183726/133‑1 (MQ=255) ccTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCt > 2:1178564/1‑150 (MQ=255) cTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCtt < 2:559963/150‑1 (MQ=255) tGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCa > 2:649300/1‑115 (MQ=255) tGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCa < 1:649300/115‑1 (MQ=255) gATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGCTCTTCAGTTAAGAATAAAAACACCCGC‑GATCAGCGGGTTTTTTGATG‑GGGCGAATAGTTACTCTTCGCCCATCTTCGACTGCAGGTAGTTCTCGATACCGATCTTGt < 1:429682/150‑1 (MQ=255) tccaGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCg > 2:2209460/4‑150 (MQ=255) aaGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATC‑GGGCGGAAAGAAACTGGTCGCCCATCTGCGACTTCAGGTAGTTCTCGATACCGATCTTGTCGAt > 1:2273453/1‑150 (MQ=255) aGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATc > 1:1872670/1‑150 (MQ=255) ggACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGc > 1:1680300/1‑113 (MQ=255) ggACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGc < 2:1680300/113‑1 (MQ=255) ggCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCa > 1:877416/1‑150 (MQ=255) gccaaggccaagGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTg < 1:1751012/150‑1 (MQ=255) ccaatgccaaggCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg < 1:2209460/150‑1 (MQ=255) caaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTggg > 1:1742509/1‑150 (MQ=255) caaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTggg > 2:542953/1‑150 (MQ=255) aaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGt < 1:1351198/150‑1 (MQ=255) aaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAAGAGTAACTATTCGc > 2:1025284/1‑92 (MQ=255) aaggccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAAGAGTAACTATTCGc < 1:1025284/92‑1 (MQ=255) aaggccaaggcTTCTAAAGCTTCATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGt < 2:1887896/150‑1 (MQ=255) gccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAGCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg < 1:2276144/145‑1 (MQ=255) gccaaggcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAGCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTgg > 2:2276144/1‑145 (MQ=255) ccaaggaTTCAAACGGCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATTAG‑GGGTTCATCTAAGCGTGCTAGTACTTCCCCCTCGTCCATCTGAGAATGCCGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTcc < 1:1694563/150‑1 (MQ=255) gcTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTACTGGTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTccagcca > 1:1421695/1‑150 (MQ=255) ttCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGttt > 1:477325/1‑141 (MQ=255) ttCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGttt < 2:477325/141‑1 (MQ=255) gAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGAt < 1:1466467/150‑1 (MQ=255) cTGATCTTCCTGCAAGGATAACAGAACGCGC‑GATCAGCGGGGTTTTGTTTG‑GGGCGAATAGTTACCCTTCTCCCATCTGCTACTGCAGGGAGTTCTCGATACCGAGCTTCTCGTTCAGCCCCACTTGGGTTTCCAGCCAGTCGATGTGcg < 2:877416/150‑2 (MQ=255) tGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGctc < 1:1178564/150‑1 (MQ=255) gATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGctct > 1:691310/1‑150 (MQ=255) ggCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTGATCGGTCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGa > 1:2261067/1‑150 (MQ=255) cgatctcATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGa < 1:500800/144‑1 (MQ=255) aaGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTc > 1:1282213/1‑150 (MQ=255) cATAAAAAAACCCGCTGATC‑GCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg > 1:2198347/1‑150 (MQ=255) cATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg < 2:219682/150‑1 (MQ=255) aTAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAgg > 1:1101110/1‑150 (MQ=255) tAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGa > 1:1091917/1‑150 (MQ=255) aaaaaaCCCGCTGATC‑GCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 2:808303/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 1:933474/1‑150 (MQ=255) aaaaaaCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGata > 1:770324/1‑150 (MQ=255) aaaaaCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGatat > 1:1078622/1‑150 (MQ=255) aaaCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg < 2:1804715/143‑1 (MQ=255) aaaCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg > 1:1804744/1‑143 (MQ=255) aaaCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg > 1:1804715/1‑143 (MQ=255) aaaCCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAg < 2:1804744/143‑1 (MQ=255) ccGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGa < 2:1872670/150‑1 (MQ=255) gc‑gATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTTCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAGc < 1:2175129/150‑1 (MQ=255) | CTGTGGGTAGCCGGTGAGCTGGTTGGCGGCAGCGACATCATGCTGGAAATGTTCGAGAAGGGTGAGCTGCAAACCCTGATCAAGGACGCGGCTGCCAAGGCCAAGGCTTCTGAAGCCTGATCTTCCGGCAAGCATAAAAAAACCCGC‑GATCAGCGGGTTTTTTTATG‑GGGCGAATAGTTACTCTTCGCCCATCTGCGACTGCAGGTAGTTCTCGATACCGATCTTGTCGATCAGCCCCAGTTGGGTTTCCAGCCAGTCGATGTGCTCTTCCTCGGACTCGAGGATATCTTCGAGC > NC_002947/1241822‑1242116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |