| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,541,345:1 | +T | 5.7% | coding (415/807 nt) | PP_3128 → | exopolysaccharide biosynthesis/transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,541,345 | 1 | . | T | 5.7% | 350.0 / 14.9 | 87 | coding (415/807 nt) | PP_3128 | exopolysaccharide biosynthesis/transport protein |
| Reads supporting (aligned to +/- strand): ref base . (39/43); new base T (2/3); total (41/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.71e-01 | |||||||||||
CCTTGGCCATCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGT > NC_002947/3541196‑3541490 | ccTTGGCCATCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGc < 2:117426/150‑1 (MQ=255) ttGGCCATCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGc‑cc > 2:1294729/1‑150 (MQ=255) gCCATCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATg < 2:997914/150‑1 (MQ=255) aTCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg < 2:1387440/150‑1 (MQ=255) aTCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg > 1:917412/1‑150 (MQ=255) aTCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg > 1:737404/1‑150 (MQ=255) aTCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg > 1:391385/1‑150 (MQ=255) tCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGc < 1:1280025/150‑1 (MQ=255) ccTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAgg < 2:917412/150‑1 (MQ=255) ccTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGCACCTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAgg < 1:757114/150‑1 (MQ=255) tCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGT‑CCATGGAGCAGGCa > 2:1697028/1‑150 (MQ=255) cGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCAc < 1:1143511/150‑1 (MQ=255) cAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGa > 1:833548/1‑150 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGcccaggt < 1:1050596/150‑7 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAgg < 1:1036229/143‑1 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAgg > 2:1036229/1‑143 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGaa < 1:1697028/150‑1 (MQ=255) gCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGa < 1:1314920/150‑1 (MQ=255) gCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGa < 2:420923/150‑1 (MQ=255) ccGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAg < 2:391385/150‑1 (MQ=255) gggCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGAc > 2:1862753/1‑150 (MQ=255) ggCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACg > 2:1188110/1‑150 (MQ=255) gCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGACCCGGCACTGAACGAGTTTCCGCCgg > 2:960264/1‑150 (MQ=255) aaGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTg < 1:1032665/132‑1 (MQ=255) aaGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTg > 2:1032665/1‑132 (MQ=255) gACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACaa > 2:1924658/1‑150 (MQ=255) ccATGCTGGCGATCCACCTGGCCGAGAGTAATTCCCACCACACCACCAAGACTGCGTTACTGGTCGAGCGGGTCCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAgg < 1:1211029/150‑1 (MQ=255) tGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTCCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCg > 1:748143/1‑150 (MQ=255) gATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa > 1:469022/1‑150 (MQ=255) gATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa > 2:1583458/1‑150 (MQ=255) aTCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGcccag > 1:1495328/1‑113 (MQ=255) aTCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGcccag < 2:1495328/117‑5 (MQ=255) aCCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACt < 2:469022/150‑1 (MQ=255) tGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCATTTACCTCAGCCCGA‑ACATGGAGCACGCCCTGAACGAATTTCTGCCCGACCAGGCCGAGTTGCAGGACtcgc > 2:315310/1‑147 (MQ=255) tGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑GCATGGAGCAAGCACTGAACGAATCTCTGAGGGACAAGGCCGAGTTGCAGGACTGcc < 1:1220497/150‑1 (MQ=255) ggCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCt < 2:833548/150‑1 (MQ=255) gCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGCCGGACAAGGCCGAGTTGCAGGcctgcctg > 1:1489548/1‑150 (MQ=255) cATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGt < 2:924701/150‑1 (MQ=255) aGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAc < 2:464795/150‑1 (MQ=255) aGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAc < 2:1111182/150‑1 (MQ=255) aGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAc < 1:1294729/150‑1 (MQ=255) tATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAccc > 1:1300584/1‑150 (MQ=255) ttGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa > 2:1842453/1‑130 (MQ=255) ttGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa < 1:1842453/130‑1 (MQ=255) caccacaccaCCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTg > 2:820863/1‑150 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGa > 2:69188/1‑118 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGa < 1:69188/118‑1 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAcc > 1:490558/1‑141 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAcc < 2:490558/141‑1 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc > 2:1445240/1‑150 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc < 2:239094/150‑1 (MQ=255) ccacaccacCAAGACTGCGTTACTGTTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGcc > 1:1483419/1‑150 (MQ=255) accaAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTc < 2:1114397/150‑1 (MQ=255) accaAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTc > 1:2215956/1‑150 (MQ=255) caAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTcct < 1:1924658/150‑3 (MQ=255) aCTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgtggtg > 1:339551/1‑150 (MQ=255) atGCGTTACTGGTGGACTTCGACCTGCGCCGGACCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgc < 2:820183/149‑1 (MQ=255) gTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGcc > 2:1369728/1‑150 (MQ=255) ttACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgct < 2:1471865/146‑1 (MQ=255) ttACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgct > 1:1471865/1‑146 (MQ=255) cTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCg > 1:1603562/1‑94 (MQ=255) cTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCg < 2:1603562/94‑1 (MQ=255) tggtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAAcgc < 1:960264/150‑1 (MQ=255) gtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg > 2:221526/1‑150 (MQ=255) cTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAg > 2:328397/1‑88 (MQ=255) cTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAg < 1:328397/88‑1 (MQ=255) cTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTAcc < 1:1445240/150‑1 (MQ=255) ttCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg > 1:1489022/1‑144 (MQ=255) ttCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg < 2:1489022/144‑1 (MQ=255) aCCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGc < 1:626580/150‑1 (MQ=255) cgcCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGGACGGGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTg > 1:2038237/1‑150 (MQ=255) ccGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTc < 1:221526/150‑1 (MQ=255) ccGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTc < 1:1583458/150‑1 (MQ=255) ccGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTc < 2:1644977/150‑1 (MQ=255) gCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgt < 2:1978694/114‑1 (MQ=255) gCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgt > 1:1978694/1‑114 (MQ=255) cccAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGAcc < 2:1520417/150‑1 (MQ=255) aaGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgctgc < 1:2046089/118‑1 (MQ=255) aaGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgctgc > 2:2046089/1‑118 (MQ=255) tCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGc > 2:101802/1‑150 (MQ=255) ggCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTg > 2:1620966/1‑150 (MQ=255) cAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTc < 2:2215956/150‑1 (MQ=255) cTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgtgg < 1:697947/97‑1 (MQ=255) cTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCgtgg > 2:697947/1‑97 (MQ=255) cTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGccc > 1:555512/1‑150 (MQ=255) gtgCCTGCTCCATGG‑GCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg < 2:603825/107‑1 (MQ=255) gtgCCTGCTCCATGG‑GCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg > 1:603825/3‑109 (MQ=255) ggCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg < 2:748143/150‑1 (MQ=255) ccTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGt > 1:910325/1‑150 (MQ=255) | CCTTGGCCATCACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGT > NC_002947/3541196‑3541490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |