| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 65528 | 81 (0.920) | 6 (0.070) | 6/232 | NT | 7.3% | coding (586/1653 nt) | betA‑I | choline dehydrogenase |
| ? | NC_002947 | = 65534 | 77 (0.930) | coding (592/1653 nt) | betA‑I | choline dehydrogenase | |||||
GGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/65372‑65528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcaCACCACTGCGCTGGTTGACCTGAAAATATCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACCTTGCCAATACCGCTCTGCTCGGCGGCATCTCGGAAAGCATCAAGGATCGGCCAGCTGTAGCGTTGCCGCTCGACCCGCCA < NC_002947/65534‑65387 GGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAAC < 1:1598602/150‑1GGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAAC > 1:2003284/1‑150 GGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCG > 2:1912879/1‑150 GAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGATCAACCAGCGC > 1:1563772/1‑150 CGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCGCACACCACTGCGCTGGTT < 2:128551/150‑1 AGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCGCACACCACTGCGCTGGTTGA < 2:1184103/150‑1 AACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCGCACACCACTGCGCTGGTTGAC < 1:985164/68‑1 AACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCGCACACCACTGCGCTGGTTGAC > 2:985164/1‑68 GGATATTTTCAGGTCAACCAGCGCAGTGGTGTGCGCTGGTTGACCTGAAAATATCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACC > 1:1714550/1‑93 GGATATTTTCAGGTCAACCAGCGCAGTGGTGTGCGCTGGTTGACCTGAAAATATCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACC < 2:1714550/93‑1 CAGCGCACACCACTGCGCTGGTTGACCTGAAAATATCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACCTTGCCAATACCGCTCTGCTCGGCGGCATCTCGGAAAGCATCAAGGATCGGCCAGCTGTAGCGTTGCCGCTCGACC > 2:1523958/1‑150 CAGCGCACACCACTGCGCTGGTTGACCTGAAAACATCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACCTTGCCAATACCGCTCTGCTCGGCGGCATCTCGGAAAGCATCAAGGATCGGCCAGCTGTAGCGTTGCCGCTCGACC > 2:1406151/1‑150 CGCACCCCACTGCGCTGGTTGACATGAAAATATCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACCTTGCCAATACCGCTCTGCTCGGCGGCATCTCGGAAAGCATCAAGGATCGGCCAGCTGTAGCGTTGCCGCTCGACCCGC < 2:274697/150‑1 CACACCACTGCGCTGGTTGCCCTGAAAATTTCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACCTTGCCAATACCGCTCTGCTCGGCGGCATCTCGGAAAGCATCAAGGATCGGCCAGCTGTAGCGTTGCCGCTCGACCCGCCA < 2:1886811/150‑1 GGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATGCTTTCCGAGATGCCGCCGAGCAGAGCGGTATTGGCAAGGTCGACGATTTCAACACCGGCGACAACCAGGGTTGTGGATATTTTCAGGTCAACCAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/65372‑65528‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcaCACCACTGCGCTGGTTGACCTGAAAATATCCACAACCCTGGTTGTCGCCGGTGTTGAAATCGTCGACCTTGCCAATACCGCTCTGCTCGGCGGCATCTCGGAAAGCATCAAGGATCGGCCAGCTGTAGCGTTGCCGCTCGACCCGCCA < NC_002947/65534‑65387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |