| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 85065 | 101 (1.140) | 6 (0.080) | 6/214 | NT | 6.1% | intergenic (+43/+87) | aroE/PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter |
| ? | NC_002947 | = 85104 | 97 (1.280) | intergenic (+82/+48) | aroE/PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter | |||||
CTGGATGGGTTGGGGATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/84903‑85065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacgcaaggccgCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCACGCC < NC_002947/85104‑84955 CTGGATGGGTTGGGGATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCG < 2:582172/150‑1 GATGGGTTGGGGATGCTGGCTGAGCAGGCAGCTGACGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGCGCCGCTTGGCGGACCTATCGCGA < 2:678597/150‑1 GATGGGTTGGGGATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGA < 2:2204517/150‑1 GATGGGTTGGGGATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGATCGGGACTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGA > 1:2268845/1‑150 GTTGGGGATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGTCTGCTTTGCAGCCC‑ATCGCGACGCAAG > 1:1911665/1‑150 GTTGGGGATGCTGGCTGAGCAGGCAGATGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAA > 2:2020666/1‑150 GTTGAGGATGCTGGCTGAGCAGGCAACTGAAGCCTTCTTTATCTGGCGTGACGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTCTCGCGACCCAA > 2:414809/1‑150 TTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TAC > 1:734787/1‑150 TTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCC > 1:530785/1‑116 TTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCC < 2:530785/116‑1 TGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGA > 1:79367/1‑150 GTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGG < 2:79367/150‑1 GTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCAGCCC‑ATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGC < 2:556172/150‑1 GGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCC < 1:26242/150‑1 TGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGTCTGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCC < 2:1911665/150‑1 cgatctCTATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGAATACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGC < 1:502810/144‑1 TATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGGCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGGCGACCGCGGCGCgatcg > 2:502810/1‑145 TCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCC > 2:1926486/1‑150 CGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCG < 2:2244939/150‑1 CGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCG < 2:2282019/150‑1 CGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCG < 2:2284512/150‑1 CGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGC < 2:862164/150‑1 GCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCA < 2:875081/150‑1 CAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCAC < 2:1471257/150‑1 AAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACG > 1:377979/1‑150 GCCGCTCCCACAGAGCATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGAGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCA > 1:1034746/1‑150 CCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCAC > 2:734787/1‑150 CCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCAC < 1:2012761/150‑1 CGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCACG < 1:1639654/150‑1 GCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCTG‑CCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCACGCC < 1:974917/150‑1 GCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCGGTGCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCACGC < 1:1526338/150‑1 GCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCG > 2:242277/1‑127 GCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCG < 1:242277/127‑1 CTGGATGGGTTGGGGATGCTGGCTGAGCAGGCAGCTGAAGCCTTCTTTATCTGGCGTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/84903‑85065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacgcaaggccgCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATAGGGCCGCCAAGCGGCCCCGGCCAGCTCAGCCCCGAGCGAGTTGCCGGCGCAGTTCAGCCAACACCGGCGCCGTATCCGGCCTCACGCCACGCC < NC_002947/85104‑84955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |