| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 95622 = | 74 (0.840) | 7 (0.090) | 7/230 | NT | 9.4% | intergenic (+14/+58) | PP_0087/PP_0088 | hypothetical protein/alkanal monooxygenase |
| ? | NC_002947 | 95674 = | 67 (0.820) | intergenic (+66/+6) | PP_0087/PP_0088 | hypothetical protein/alkanal monooxygenase | |||||
GACGGGTGCGGATGAGCTGATCTTTACCTGTGACCTGTATGAGCATGCGGACCGCATTCGGTCATATGAGCTGATGGCGCAGGCCCTCAAGACCGAGTGACCCTCGTCGCGGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCCCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/95779‑95622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccgcgaCGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTCATCCGCACCCGTCTGTTCCAGCAGCACTTCTACCTTGGCCTTTACCTTCCG > NC_002947/95674‑95817 GACGGGTGCGGATGAGCTGATCTTTACCTGTGACCTGTATGAGCATGCGGACCGCATTCGGTCATATGAGCTGATGGCGCAGGCCCTCAAGACCGAGTGACCCTCGTCGCGGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAA < 2:1784073/150‑1 GGGTGCGGATGAGCTGATCTTTACCTGTGACCTGTATGAGCATGCGGACCGCATTCGGTCATATGAGCTGATGGCGCAGGCCCTCAAGACCGAGTGACCCTCGTCGCGGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCC > 2:1948234/1‑150 GGGTGCGGATGAGCTGATCTTTACCTGTGACCTGTATGAGCATGCGGACCGCATTCGGTCATATGAGCTGATGGCGCAGGCCCTCAAGACCGAGTGACCCTCGTCGCGGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCC > 2:1277533/1‑150 GGTGCGGATGAGCTGATCTTTACCTGTGACCTGTATGAGCATGCGGACCGCATTCGGTCATATGAGCTGATGGCGCAGGCCCTCAAGACCGAGTGACCCTCGTCGCGGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCCC < 1:343707/150‑1 CCTCGTCGCGGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCCCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTTCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTC > 1:12429/1‑150 GGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCCCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAA > 2:223239/1‑132 GGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCCCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAA < 1:223239/132‑1 GCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCCCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTCATCCGCACCCG > 2:125849/1‑150 GCCCGCTCCCATAGGTTGACTTGGGAGCGGGCGAGCCCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAAT < 2:456974/93‑1 GCCCGCTCCCATAGGTTGACTTGGGAGCGGGCGAGCCCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAAT > 1:456974/1‑93 TGGGAGCGAGCAAGCCCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTCATCCGCACCCGTCTGTTCCAGCAGCACTTCTACCTT < 1:125849/150‑1 CCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTCATCCGCACCCGTCTGTTCCAGCAGCACTTCTACCTTGGCCTTTACCTTCCG > 1:1263851/1‑150 CCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTCATCCGCACCCGTCTGTTCCAGCAG < 2:1646345/123‑1 CCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTCATCCGCACCCGTCTGTTCCAGCAG > 1:1646345/1‑123 CCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGC < 1:1959155/97‑1 CCGCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGC > 2:1959155/1‑97 GCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAG > 1:91574/1‑76 GCGACGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAG < 2:91574/76‑1 GACGGGTGCGGATGAGCTGATCTTTACCTGTGACCTGTATGAGCATGCGGACCGCATTCGGTCATATGAGCTGATGGCGCAGGCCCTCAAGACCGAGTGACCCTCGTCGCGGGCTCGCCCGCTCCCATAGGTTGACTTGGGAGCGAGCAAGCCCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/95779‑95622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccgcgaCGAGGGTCACTCGGTCTTGAGGGCCTGCGCCATCAGCTCATATGACCGAATGCGGTCCGCATGCTCATACAGGTCACAGGTAAAGATCAGCTCATCCGCACCCGTCTGTTCCAGCAGCACTTCTACCTTGGCCTTTACCTTCCG > NC_002947/95674‑95817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |