| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 202783 = | 95 (1.080) | 8 (0.090) | 7/238 | NT | 11.4% | coding (8289/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 206823 = | 33 (0.390) | coding (12329/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GACTTCGTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/202936‑202783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGCGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTCGTGGCCAAGTTG > NC_002947/206823‑206968 GACTTCGTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTG < 1:1903445/150‑1 ACTTCGTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG < 1:908783/150‑1 ACTTCGTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG < 1:1491067/150‑1 ACTTCGTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG < 1:1937528/150‑1 TTCGTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGT > 2:68563/1‑150 GTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGCTGTCGAAGCTGGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTata > 1:2040183/1‑147 TTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG < 2:139718/120‑1 TTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG > 1:139718/1‑120 ACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGT > 1:2205904/1‑114 ACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGT < 2:2205904/114‑1 CACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG > 2:964445/1‑83 CACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG < 1:964445/83‑1 CAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGT < 1:1552928/54‑1 CAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGT > 2:1552928/1‑54 GCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG < 1:2180378/40‑1 GCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGG > 2:2180378/1‑40 AACGTCATCACCCTGCGCAGCGTGGGTGATGACGTT < 2:607851/36‑1 AACGTCATCACCCTGCGCAGCGTGGGTGATGACGTT > 1:607851/1‑36 ACGTCATCACCCTGCGCAGCGTGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGT > 2:1250427/1‑79 ACGTCATCACCCTGCGCAGCGTGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGT < 1:1250427/79‑1 TCATCACCCTGCGCAGCGTGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGCGCTGGGCGGTGCCGCGAA > 2:151343/1‑127 TCATCACCCTGCGCAGCGTGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGCGCTGGGCGGTGCCGCGAA < 1:151343/127‑1 TCATCACCCTGCGCAGCGTGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGT > 2:1943825/1‑89 TCATCACCCTGCGCAGCGTGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGT < 1:1943825/89‑1 GGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGCGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTCGTGGCCAAGTTG > 1:1035881/1‑150 GGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGCGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTCGTGGCCAAGTTG > 1:309947/1‑150 GACTTCGTCGGTGGTGTCGGTGACATCCACCTTCGCGGCACCGCCCAGCGCCAGGTTCTCGAAGGTTGCACCAGTGGCGTCCACCGCCGAGGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCGTGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/202936‑202783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtgATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGCGCTGGGCGGTGCCGCGAAGGTGGATGTCACCGACACCACCGACGAAGTCGTGGCCAAGTTG > NC_002947/206823‑206968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |