New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 226123112 (1.270)6 (0.070) 6/232 NT 5.6% coding (349/819 nt) PP_0174 hypothetical protein
?NC_002947 = 226140 97 (1.180)coding (366/819 nt) PP_0174 hypothetical protein

CGGTGTACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/225968‑226123
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgctgGCCAAGGTTGAACCAGGCAGCAGCATTGCCCTGCAGGGCCGCCATGCGCAACAGGTGCCCGGCCAGCACGGTATCGGCCCGCCAGTACTTGCCGTTGAGCCAGATCCAGCCGAGGTCGTTCAATGCGGACACGCTGCCTTGCAATGC  <  NC_002947/226140‑225994
                                                                                                                                                                                                                                                                                                               
CGGTGTACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATG                                                                                                                                                           <  1:318851/150‑1
  GTGTACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCT                                                                                                                                                         >  1:1395067/1‑150
  GTGTACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGACGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCT                                                                                                                                                         <  1:1334158/150‑1
   TGTACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTG                                                                                                                                                        <  1:1940509/150‑1
     TACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCT                                                                                                                                                      <  1:1943684/150‑1
      ACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCTG                                                                                                                                                     >  1:1085047/1‑150
                                              CGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTG                                                                                                                                                        <  2:293166/107‑1
                                              CGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTG                                                                                                                                                        >  1:293166/1‑107
                                                              GGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAAT                                                                                                                                                            >  1:1056956/1‑87
                                                              GGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAAT                                                                                                                                                            <  2:1056956/87‑1
                                                               GCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCTGGCCAAGGTTGAACCAGGCAGCAGCA                                                                                                                            >  1:1318893/1‑118
                                                               GCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCTGGCCAAGGTTGAACCAGGCAGCAGCA                                                                                                                            <  2:1318893/118‑1
                                                                CTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCTGGCCAAGGTTGAACCAGGCAGCAGCATT                                                                                                                          <  1:134764/119‑1
                                                                CTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCTGGCCAAGGTTGAACCAGGCAGCAGCATT                                                                                                                          >  2:134764/1‑119
                                                                                 GCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAGTGCTGCTGGCCAAGGTTGAACCAGGCAGCAGCATTG                                                                                                                         >  1:1997968/1‑103
                                                                                 GCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAGTGCTGCTGGCCAAGGTTGAACCAGGCAGCAGCATTG                                                                                                                         <  2:1997968/103‑1
                                                                                                                                                    TGCTGCTGGCCAAGGTTGAACCAGGCAGCAGCATTGCCCTGCAGGGCCGCCATGCGCAACAGGTGCCCGGCCAGCACGGTATCGGCCCGCCAGTACTTGCCGTTGAGCCAGATCCAGCCGAGGTCGTTCAATAAAGAAACGCTGCCTata       >  2:498647/1‑147
                                                                                                                                                      gatCTGGCCAAGGTTGAACCAGGCAGCAGCATTGCCCTGCAGGGCCGCCATGCGCAACAGGTGCCCGGCCAGCACGGTATCGGCCCGCCAGTACTTGCCGTTGAGCCAGATCCAGCCGAGGTCGTTCAATGCGGACACGCTGCCTTGCAA     <  1:1885067/147‑1
                                                                                                                                                      CTGCTGGCCAAGGTTGAACCAGGCAGCAGCATTGCCCTGCAGGGCCGCCATGCGCAACAGGTGCCCGGCCAGCACGGTATCGGCCCGCCAGTACTTGCCGTTGAGCCAGATCCAGCCGAGGTCGTTCAATGCGGACACGCTGCCTTGCAA     <  1:1584400/150‑1
                                                                                                                                                         CTGGCCAAGGTTGAACCAGGCAGCAGCATTGCCCTGCAGGGCCGCCATGCGCAACAGGTGCCCGGCCAGCACGGTATCGGCCCGCCAGTACTTGCCGTTGAGCCAGATCCAGCCGAGGTCGTTCAATGCGGACACGCTGCCTTGCAATGC  >  2:1562926/1‑150
                                                                                                                                                                                                                                                                                                               
CGGTGTACGTCGACCTGCGGCGTCAGGCATTGCAAGGCAGCGTGTCCGCATTGAACGACCTCGGCTGGATCTGGCTCAACGGCAAGTACTGGCGGGCCGATACCGTGCTGGCCGGGCACCTGTTGCGCATGGCGGCCCTGCAGGGCAATGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/225968‑226123
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgctgGCCAAGGTTGAACCAGGCAGCAGCATTGCCCTGCAGGGCCGCCATGCGCAACAGGTGCCCGGCCAGCACGGTATCGGCCCGCCAGTACTTGCCGTTGAGCCAGATCCAGCCGAGGTCGTTCAATGCGGACACGCTGCCTTGCAATGC  <  NC_002947/226140‑225994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.