| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1037774 = | 107 (1.210) | 5 (0.070) | 5/202 | NT | 6.5% | intergenic (+16/+100) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| ? | NC_002947 | 1037852 = | 56 (0.780) | intergenic (+94/+22) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase | |||||
GTACACATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1037942‑1037774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAACTCG > NC_002947/1037852‑1038000 GTACACATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGG < 1:977314/150‑1GTACACATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGCGCAAGCCCTCTCCGACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGG > 1:1323406/1‑150 CATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGG < 2:2333739/150‑1 CATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGG > 2:295901/1‑150 ATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG > 1:2296788/1‑150 ATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG > 1:599287/1‑150 ATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG < 2:599287/150‑1 ATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG > 1:2055272/1‑150 ATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCG < 1:1848869/148‑1 ATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCG > 2:1848869/1‑148 ATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTACGGGGCGGG > 2:756617/1‑150 TCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGGCATAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGC < 1:145490/150‑1 TCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGCTGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGC < 1:145522/150‑1 TCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGC > 2:835489/1‑150 TCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGC > 1:351257/1‑150 CACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGATCGGGCT > 2:1108039/1‑150 CTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTG < 1:603942/150‑1 CCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCG > 2:1630943/1‑150 CCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGC > 2:837277/1‑150 CCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGC > 2:2280308/1‑150 CCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCC > 2:1467958/1‑144 CCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCC < 1:1467958/144‑1 GTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGC < 1:443972/130‑1 GTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGC > 2:443972/1‑130 GCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTG < 1:727968/122‑1 GCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTG > 2:727968/1‑122 CGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG > 2:177842/1‑115 CGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG < 1:177842/115‑1 CGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCC < 1:74495/109‑1 CGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCC > 2:74495/1‑109 GTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTT < 2:1453271/87‑1 GTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCAAACGTACAGCGCAAGCCAGAAGGCTACGCATTT > 1:1453271/1‑87 CCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCGCACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCT > 1:144122/1‑89 CCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCGCACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCT < 2:144122/89‑1 CCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCG > 2:1504847/1‑150 CGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGAGGCCGCCACAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCT < 1:1504847/150‑1 TGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG < 1:1816022/67‑1 TGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGG > 2:1816022/1‑67 TCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCA > 2:2257964/1‑150 CCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACA > 1:1843932/1‑134 CCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACA < 2:1843932/134‑1 GGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCA > 1:14594/1‑150 GGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTT < 2:2097682/54‑1 GGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTT > 1:2097682/1‑54 GCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGT > 2:634706/1‑150 GGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCC < 2:1827031/150‑1 GCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTT > 1:88957/1‑150 GCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTT < 2:145522/150‑1 GCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTT < 1:1476624/150‑1 GCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTT < 2:145490/150‑1 TTGCCCGCGAAGCAGCCGCCGCAGTTACATCATGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGA < 2:978649/150‑1 CCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTC > 1:498854/1‑150 GCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGA > 1:423437/1‑150 GCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCG > 1:2197229/1‑132 GCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCG < 2:2197229/132‑1 GCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGGCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAACTCG < 1:473035/150‑1 GTACACATCACTGGCCCTGCCCTGTGGCAGAGCAAGATTGCCGAAAGCCTGGCCGTCGAAGTGAAGTAACCTGATGTAACTGCGGCGGCTGCTTCGCGGGCAAGCCCGCTCCCACACGTACAGCGCAAGCCAGAAGGCTACGCATTTGGGAGCGGGCTTGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1037942‑1037774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggagcgggcttgcccgcgaagCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGCTCTGCCACAGGGCAGGGCCAGTGATGTGTACCGATTCACCGTTGCTGTCCACGGCGACGGTCACCGGCATGTCCTTGACTTCGAACTCG > NC_002947/1037852‑1038000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |