New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1094112	75 (0.850)	7 (0.080)	7/242	NT	7.8%	coding (60/465 nt)	ptsN	phosphotransferase system subunit IIA
	?	NC_002947	= 1094147	92 (1.070)					coding (25/465 nt)	ptsN	phosphotransferase system subunit IIA

GCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1093961‑1094112 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACTGGAGATGCAGGACGTCTTCGAAAAACTGGTAGCCCGGGAAAAGCTCGGTTCTA  <  NC_002947/1094147‑1094000                                                                                                                                                                                                                                                                                                               GCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGC                                                                                                                                                         >  1:902949/1‑150  CCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCT                                                                                                                                                        >  2:459916/1‑150                     ATGCCATTGCCGAAACCGATAGAACCGAGCTTTTCCCGGGCTATCACATCCACGAACACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCTACCTTTTCCAGGGCGCGCTTCTTGCTGACCCCCGGC‑CGTTCCCTC                                                                                                                                    <  2:1135163/150‑1                          ATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCTGCCTCCCGGC‑CGTTCCCTCGTGAA                                                                                                                               >  2:1427805/1‑150                              CCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCTGCCTCCCGGC‑CGTTCCCTCGTGAACGTG                                                                                                                           <  1:1427805/150‑1                               CGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGC                                                                                                                          >  1:382480/1‑150                                                                              ACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAA                                                                                                          >  1:1853784/1‑119                                                                              ACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAA                                                                                                          <  2:1853784/119‑1                                                                                     GCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCT                                                                                                                                                        >  1:1717604/1‑67                                                                                     GCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCT                                                                                                                                                        <  2:1717604/67‑1                                                                                           CCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGC                                                                                                                                                         <  1:221121/60‑1                                                                                           CCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGC                                                                                                                                                         >  2:221121/1‑60                                                                                                                                               CTTCTTGCTGCCTCCCGGCACGTTCACGAGGGAACG‑GCCGGGGGTCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACTGGAGATGCAGGACGTCTTCGAAAAACTGGTAGCCCGGGAAAAGCT          >  2:382480/1‑150                                                                                                                                                   atcaTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACTGGAGATGCAGGACGTCTTCGAAAAACTGGTAGCACGGGAAAAGCTCGGT      >  2:1065493/5‑150                                                                                                                                                      CTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACT                                                       >  2:1923108/1‑98                                                                                                                                                      CTGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACT                                                       <  1:1923108/98‑1                                                                                                                                                       TGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACTGGAGATGCAGGACGTCTTCGAAAAGCTGGTAGCCCGGGAAAAGCTCGGTTCTA  >  1:922017/1‑150                                                                                                                                                       TGACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACTGGAGATGCAGGAAGTATTAGAAAAACTGGTAGCCCGGGAAAAGCTCGGTTCTA  <  2:1115555/150‑1                                                                                                                                                                                                                                                                                                               GCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGATGACAGTGGCGACCTTTTCCAGGGCGCGCTTCTTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1093961‑1094112 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgACCCCCGGC‑CGTTCCCTCGTGAACGTGCCGGGAGGCAGCAAGAAGCGCGCCCTGGAAAAGGTCGCCACTGTCATCGCCGACCAAGTGCCAGAACTGGAGATGCAGGACGTCTTCGAAAAACTGGTAGCCCGGGAAAAGCTCGGTTCTA  <  NC_002947/1094147‑1094000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.