New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1170746 = | 87 (0.990) | 6 (0.070) | 6/240 | NT | 5.4% | intergenic (‑331/+102) | leuA/PP_1026 | 2‑isopropylmalate synthase/M23/M37 family peptidase |
? | NC_002947 | 1170839 = | 125 (1.460) | intergenic (‑424/+9) | leuA/PP_1026 | 2‑isopropylmalate synthase/M23/M37 family peptidase |
AACGATGCGCGGGTGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1170898‑1170746 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACGCAGTTGCTGG > NC_002947/1170839‑1170986 AACGATGCGCGGGTGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑A < 2:7547/150‑1 GATGCGCGGGTGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AGGC > 2:2178489/1‑150 TTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AG > 1:351115/1‑112 TTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AG < 2:351115/112‑1 CTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑A < 1:1766164/103‑1 CTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑A > 2:1766164/1‑103 CTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AGGCGCCGCAGTTTTGGGGGTGGAACGCGCCAATGAAAATCGCCGGGTCCACCC > 1:121709/1‑150 CCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGA > 1:296202/1‑142 CCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGA < 2:296202/142‑1 GCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGT > 2:397055/1‑150 CAGCACAATACTTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGA < 1:397055/150‑1 GCGAAG‑AGGCGCCGCAGTTTACGGGCTGGAACGCGCCCATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACGCA < 2:121709/150‑1 GGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACGCAGTTGCTG < 2:1755233/150‑1 GGCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTCGGTCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACGCAGTTGCTG < 1:1333856/150‑1 GCGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACGCAGTTGCTGG < 1:1962059/150‑1 AACGATGCGCGGGTGGACCCGGCGATTTTCATTGGCGCGTTCCAGCCCTGAAACTGCGGCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACAGCGAAGCCTTCAGACACAGCACAATACTTGTGGGAGCGGGCATGCCCGCGAAG‑AGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1170898‑1170746 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcGCCGCAGTTTCAGGGCTGGAACGCGCCAATGAAAATCGCCGGGTCCACCCGCGCATCGTTCAGGCTGACGTTCCAGTGCATGTGCGGCCCGGTTGCCCGCCCGGTCGAGCCCACGCGCCCGACCACCTCGCCACGACGCAGTTGCTGG > NC_002947/1170839‑1170986 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |