| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1648974 = | 84 (0.950) | 8 (0.110) | 7/214 | NT | 9.9% | intergenic (‑211/+85) | oprB‑II/PP_1446 | carbohydrate‑selective porin/TonB‑dependent receptor |
| ? | NC_002947 | 1649030 = | 73 (0.960) | intergenic (‑267/+29) | oprB‑II/PP_1446 | carbohydrate‑selective porin/TonB‑dependent receptor | |||||
GCTATGCCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1649138‑1648974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAACGC > NC_002947/1649030‑1649178 GCTATGCCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCAT > 1:25435/1‑150 ATGCCAGTTCGATCCTGCGCGATATCGCACCGGCGCAGGGGCGTAGGATGCACGCCGGGTTGCGTACCACTGTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCG > 1:406824/1‑150 GCCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCATAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCG < 1:1330615/150‑1 CCAGTTCGATCCTGCGCGATATCGCACCGGCGTCGTGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGttg < 1:1248685/150‑4 CCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGG > 1:972023/1‑150 CCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGG > 1:1519308/1‑150 CCAGTTCGATCCTGCCGGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGCCGGGTTGCGTACCACCTTCTTAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGG < 1:2028213/150‑1 CAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGG > 2:996927/1‑150 CAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGG > 1:765397/1‑150 CAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGG < 2:972023/150‑1 CAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGC > 2:1250060/1‑147 CAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGC < 1:1250060/147‑1 TTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGA > 1:96785/1‑150 GATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACC < 2:730179/150‑1 GATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACC > 2:727567/1‑150 CCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTag > 2:1430836/1‑79 CCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCG < 1:1430836/81‑1 TTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGC > 2:1243515/1‑80 TTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGC < 1:1243515/80‑1 AAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGCTCCTACACCTATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCG > 1:2013648/1‑150 CCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGCTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTG > 2:2205513/1‑150 cctCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGG > 2:1203642/4‑150 CGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGC > 1:351125/1‑150 GCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCA > 2:2074777/1‑150 AATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCC > 2:2052669/1‑99 AATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCC < 1:2052669/99‑1 ATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGC < 1:1203642/150‑1 GCGCATTCGCGGGTGAACCCGCTCCTACACCTATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGG < 2:2013648/150‑1 TTCGCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACTCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTC < 1:2149082/150‑1 GCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGG > 1:918136/1‑90 GCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGG < 2:918136/90‑1 GCGGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGAACAGGGGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCC > 2:71191/1‑150 GGGTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGC > 1:1977203/1‑150 GTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGGCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGC > 1:1225528/1‑150 GTGAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGC > 1:769783/1‑150 GAACCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCAC < 2:206882/150‑1 CCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAA > 2:339103/1‑150 CCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGAACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCA < 2:2163890/95‑1 CCCGTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGAACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCA > 1:2163890/1‑95 GTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAACGC < 1:730179/150‑1 GTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAACGC < 2:769783/150‑1 GCTATGCCAGTTCGATCCTGCGCGATATCGCACCGGCGCCGGGGCGTAGCGTGGAAGTCGGGTTGCGTACCACCTTCTGAACCACAAGCGACGAAGATCGGTGTAGGAACGGGTTCACCCGCGAATACGATGGTAGGGCAACCGGCGCATTCGCGGGTGAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1649138‑1648974‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgTTCCTACACCGATCTTCGTCGCTTGTGGTTCAGAAGGTGGTACGCAACCCGACTTCCACGCTACGCCCCGGCGCCGGTGCGATATCGCGCAGGATCGAACTGGCATAGCGCACGGTCTGGTCGGTCAGGTTTTCGCCGCGCACAAACGC > NC_002947/1649030‑1649178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |