New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1927911 = | 72 (0.820) | 4 (0.050) | 4/234 | NT | 5.8% | coding (677/714 nt) | PP_1727 | GntR family transcriptional regulator |
? | NC_002947 | 1927937 = | 63 (0.760) | coding (703/714 nt) | PP_1727 | GntR family transcriptional regulator |
ACCTGGCGACGCCGCGGTTGTCGGTGCAGGTGGTGACAGCCGGTGGGGGTGGAATGACAGAGGCCGGCTCGTAGGAGCGGATTGACCCGCGAAGAAGGCAACACCTCATCCAGCCTGGGCACGAATGCGGAT‑CGCA‑TCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1928053‑1927911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtgccCAGGCTGGATGAGGTGTTGCCTTCTTCGCGGGTCAATCCGCTCCTACGAGCCGGCCTCTGTCATTCCACCCCCACCGGCTGTCACCACCTGCACCGACAACCGCGGCGTCGCCAGGTCCAGCCCGGCTTCATCCAGCTGCCGCTTCAAG > NC_002947/1927937‑1928085 ACCTGGCGACGCCGCGGTTGTCGGTGCAGGTGGTGACAGCCGGGGGGGGTGGAATGACAGAGGCCGGCTCGTAGGAGCGGATTGACCCGCGAAGAAGGCAACACCTCATCCAGCCTGGGCACG‑ATGCGATC‑CGCATTCGTGCCCAGGCTG > 1:280557/1‑150 GACGCCGCGGTTGTCGGTGCAGGTGGTGACAGCCGGTGGGGGTGGAATGACAGAGGCCGGCTCGTAGGAGCGGATTGACCCGCGAAGAAGGCAACACCTCATCCAGCCTGGGCACG‑ATGC‑GATCCGCATTCGTGCCCAGGCTGGATGAGG < 2:280557/150‑1 CACGAATGCGGAT‑CGCA‑TCGTGCCCAGGCTGGATGAGGTGTTGCCTTCTTCGCGGGTCAATCCGCTCCTACGAGCCGGCCTCTG > 1:1319701/1‑84 CACGAATGCGGAT‑CGCA‑TCGTGCCCAGGCTGGATGAGGTGTTGCCTTCTTCGCGGGTCAATCCGCTCCTACGAGCCGGCCTCTG < 2:1319701/84‑1 TCGTGCCCAGGCTGGATGAGGTGTTGCCTTCTTCGCGGGTCAATCCGCTCCTACGAGCCGGCCTCTGTCATTCCACCCCCACCGGCTGTCACCACCTGCACCGACAACCGCGGCGTCGCCAGGTCCAGCCCGGCTTCATCCAGCTGCCGC < 1:2128609/150‑1 TGCCCAGGCTGGATGAGGTGTTGCCTTCTTCGCGGGTCAATCCGCTCCTACGAGCCGGCCTCTGTCATTCCACCCCCACCGGCTGTCACCACCTGCACCGACAACCGCGGCGTCGCCAGGTCCAGCCCGGCTTCATCCAGCTGCCGCTTC > 2:195383/1‑150 CCAGGCTGGATGAGGTGTTGCCTTCTTCGCGGGTCAATCCGCTCCTACGAGCCGGCCTCTGTCATTCCACCCCCACCGGCTGTCACCACCTGCACCGACAACCGCGGCGTCGCCCGTTCCAGCCCGGCTTCATCCAGCTGCCGCTTCAAG < 1:187353/150‑1 ACCTGGCGACGCCGCGGTTGTCGGTGCAGGTGGTGACAGCCGGTGGGGGTGGAATGACAGAGGCCGGCTCGTAGGAGCGGATTGACCCGCGAAGAAGGCAACACCTCATCCAGCCTGGGCACGAATGCGGAT‑CGCA‑TCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1928053‑1927911 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtgccCAGGCTGGATGAGGTGTTGCCTTCTTCGCGGGTCAATCCGCTCCTACGAGCCGGCCTCTGTCATTCCACCCCCACCGGCTGTCACCACCTGCACCGACAACCGCGGCGTCGCCAGGTCCAGCCCGGCTTCATCCAGCTGCCGCTTCAAG > NC_002947/1927937‑1928085 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |