New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1947843	75 (0.850)	5 (0.070)	5/196	NT	7.1%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	= 1947910	71 (1.020)					intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase

GGCCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1947669‑1947843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtgggagcggccttgtgtcgcgaaTGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAAC  <  NC_002947/1947910‑1947773                                                                                                                                                                                                                                                                                                                           GGCCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCT                                                                                                                                                                     >  1:1117961/1‑150   CCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTt                                                                                                                                                                   >  2:1651254/1‑149            GCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGG                                                                                                                                                          >  1:135167/1‑150              ACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCC                                                                                                                                                        >  2:2132404/1‑150              ACGATGGTGTCGGTGAAGCCGGGGGGGCCGGAGGGCTTGGGCTTGTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGGCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCC                                                                                                                                                        <  2:775896/150‑1                          GTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTG                                                                                                                                                                 <  1:902018/129‑1                          GTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTG                                                                                                                                                                 >  2:902018/1‑129                                     GGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAA                                                                                                                                 <  1:1080307/150‑1                                                                    ACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGAT                                                                                                  >  2:85165/1‑150                                                                      GCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGA                                                                                                                                             >  1:1034826/1‑105                                                                      GCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGA                                                                                                                                             <  2:1034826/105‑1                                                                         TTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTT                                                                                                                                                                    <  2:563571/79‑1                                                                         TTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTT                                                                                                                                                                    >  1:563571/1‑79                                                                               ATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGC                                                                                       >  2:1037236/1‑150                                                                                     GAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGC                                                                                                                                                         <  2:1412219/78‑1                                                                                     GAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGC                                                                                                                                                         >  1:1412219/1‑78                                                                                            GGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGC                                                                                                                                                         >  2:704618/1‑71                                                                                            GGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGC                                                                                                                                                         <  1:704618/71‑1                                                                                                      GTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACA                                                                <  1:1037236/150‑1                                                                                                              GACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCG                                                        <  1:85165/150‑1                                                                                                                        GGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGT                                                                                                                                                    >  1:1507666/1‑48                                                                                                                        GGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGT                                                                                                                                                    <  2:1507666/48‑1                                                                                                                                                       ttTGGGAGAGGCCTTGTGTCGAGAATGGGGTGCGACGCGACCCTCGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGACTCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTG               <  2:1653705/148‑1                                                                                                                                                       TGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTG               <  1:294925/150‑1                                                                                                                                                        GTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGGCCGGAGGCCTGG              <  1:682952/150‑1                                                                                                                                                        GTGGGAGCGGCCGTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGG              <  2:987996/150‑1                                                                                                                                                         TGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGA             <  1:1952804/150‑1                                                                                                                                                           GGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACA           >  2:431026/1‑150                                                                                                                                                            GAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACAT          <  1:2284021/150‑1                                                                                                                                                                GGCCGTGTGTCGCGAATGGGGTGCGAATCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAACACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCC      <  1:2230593/150‑1                                                                                                                                                                 GCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCG     >  1:1200604/1‑150                                                                                                                                                                 GCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCG     >  2:118726/1‑150                                                                                                                                                                   CTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAA   <  1:431026/150‑1                                                                                                                                                                    TTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGTCTGGACATGTCCGAAC  >  2:1972784/1‑150                                                                                                                                                                              AATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAA                               <  2:1751370/111‑1                                                                                                                                                                              AATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAA                               >  1:1751370/1‑111                                                                                                                                                                                                                                                                                                                           GGCCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1947669‑1947843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtgggagcggccttgtgtcgcgaaTGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAAC  <  NC_002947/1947910‑1947773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.